FFCP PHASE1:Hg19::chr6:1612248..1612281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2296 | |EntrezGene=entrezgene:2296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=3800 | |HGNC=HGNC:3800 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-295bp_to_AK021858_5end | |association_with_transcript=-295bp_to_AK021858_5end | ||
|cluster_id=chr6:1612248..1612281,+ | |||
|description=CAGE_peak_2_at_FOXC1_5end | |description=CAGE_peak_2_at_FOXC1_5end | ||
|id=chr6:1612248..1612281,+ | |id=chr6:1612248..1612281,+ |
Revision as of 21:47, 30 July 2015
Short description: | p2@FOXC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -295bp_to_AK021858_5end |
EntrezGene: | 2296 |
HGNC: | 3800 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@FOXC1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 4.97e-14 | 28 |
GAG secreting cell | 1.26e-10 | 9 |
carbohydrate secreting cell | 1.26e-10 | 9 |
extracellular matrix secreting cell | 1.55e-09 | 15 |
synovial cell | 4.46e-07 | 3 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
articulation | 3.92e-15 | 8 |
skeletal joint | 3.92e-15 | 8 |
articular system | 3.92e-15 | 8 |
intervertebral cartilage | 9.89e-10 | 5 |
symphysis | 9.89e-10 | 5 |
nonsynovial joint | 9.89e-10 | 5 |
fibrous joint | 9.89e-10 | 5 |
cartilaginous joint | 9.89e-10 | 5 |
developing mesenchymal condensation | 9.89e-10 | 5 |
pre-cartilage condensation | 9.89e-10 | 5 |
Showing 1 to 10 of 25 entries