FFCP PHASE1:Hg19::chr11:61722845..61722856,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=12703 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 17:44, 18 September 2015
| Short description: | p13@BEST1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_BEST1_5end |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | 141bp_to_uc010rlv.1_5end |
| EntrezGene: | BEST1 |
| HGNC: | 12703 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@BEST1 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.52e-52 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.52e-52 | 42 |
| myeloid leukocyte | 4.40e-48 | 72 |
| defensive cell | 1.61e-45 | 48 |
| phagocyte | 1.61e-45 | 48 |
| monopoietic cell | 1.10e-35 | 59 |
| monocyte | 1.10e-35 | 59 |
| monoblast | 1.10e-35 | 59 |
| promonocyte | 1.10e-35 | 59 |
| macrophage dendritic cell progenitor | 2.06e-34 | 61 |
Showing 1 to 10 of 25 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 3.16e-37 | 98 |
| blood island | 3.16e-37 | 98 |
| hemolymphoid system | 2.13e-33 | 108 |
| bone marrow | 5.47e-27 | 76 |
| bone element | 9.06e-25 | 82 |
| skeletal element | 2.90e-22 | 90 |
| immune system | 1.96e-21 | 93 |
| skeletal system | 1.09e-19 | 100 |
| blood | 6.60e-16 | 15 |
| haemolymphatic fluid | 6.60e-16 | 15 |
Showing 1 to 10 of 16 entries
