FFCP PHASE2:Hg19::chr19:14544099..14544191,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5585 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9405 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5585 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9405 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q16512 | ||
|association_with_transcript=0bp_to_ENST00000242783,NM_002741,uc002myp.2_5end | |association_with_transcript=0bp_to_ENST00000242783,NM_002741,uc002myp.2_5end | ||
|cluster_id=chr19:14544099..14544191,+ | |cluster_id=chr19:14544099..14544191,+ |
Latest revision as of 04:52, 16 September 2015
Short description: | p1@PKN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PKN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000242783, NM_002741, uc002myp.2_5end |
EntrezGene: | PKN1 |
HGNC: | 9405 |
UniProt: | Q16512 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PKN1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.44e-23 | 121 |
meso-epithelial cell | 5.78e-17 | 45 |
endothelial cell | 1.24e-16 | 36 |
lining cell | 9.15e-16 | 58 |
barrier cell | 9.15e-16 | 58 |
endothelial cell of vascular tree | 2.46e-14 | 24 |
blood vessel endothelial cell | 3.99e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.99e-12 | 18 |
epithelial cell of nephron | 2.69e-08 | 15 |
smooth muscle cell | 2.79e-08 | 43 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.32e-20 | 117 |
vessel | 8.94e-20 | 68 |
vasculature | 5.96e-19 | 78 |
vascular system | 5.96e-19 | 78 |
epithelial tube open at both ends | 6.01e-18 | 59 |
blood vessel | 6.01e-18 | 59 |
blood vasculature | 6.01e-18 | 59 |
vascular cord | 6.01e-18 | 59 |
splanchnic layer of lateral plate mesoderm | 2.04e-17 | 83 |
circulatory system | 1.17e-16 | 112 |
Showing 1 to 10 of 55 entries