FFCP PHASE2:Hg19::chr1:27114159..27114169,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:55650 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26031 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26031 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 06:28, 17 September 2015
Short description: | p4@PIGV |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PIGV_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_ENST00000430292_5end |
EntrezGene: | PIGV |
HGNC: | 26031 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@PIGV |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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vascular associated smooth muscle cell | 9.28e-38 | 32 |
smooth muscle cell | 1.02e-26 | 43 |
smooth muscle myoblast | 1.02e-26 | 43 |
muscle cell | 9.91e-20 | 55 |
muscle precursor cell | 1.94e-18 | 58 |
myoblast | 1.94e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.94e-18 | 58 |
electrically responsive cell | 2.81e-17 | 61 |
electrically active cell | 2.81e-17 | 61 |
aortic smooth muscle cell | 3.82e-16 | 10 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
artery | 1.06e-30 | 42 |
arterial blood vessel | 1.06e-30 | 42 |
arterial system | 1.06e-30 | 42 |
systemic artery | 3.47e-23 | 33 |
systemic arterial system | 3.47e-23 | 33 |
epithelial tube open at both ends | 3.12e-20 | 59 |
blood vessel | 3.12e-20 | 59 |
blood vasculature | 3.12e-20 | 59 |
vascular cord | 3.12e-20 | 59 |
splanchnic layer of lateral plate mesoderm | 5.85e-19 | 83 |
Showing 1 to 10 of 49 entries