FFCP PHASE2:Hg19::chr2:220197419..220197439,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:389075 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:33762 |TSScl...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=389075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=33762 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 20:28, 24 September 2015
| Short description: | p2@RESP18 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RESP18_5end |
| Coexpression cluster: | C2466_pineal_putamen_caudate_nucleus_globus_diencephalon_hippocampus |
| Association with transcript: | 20bp_to_uc010zle.1_5end |
| EntrezGene: | RESP18 |
| HGNC: | 33762 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@RESP18 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
17.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural nucleus | 6.41e-107 | 9 |
| nucleus of brain | 6.41e-107 | 9 |
| telencephalic nucleus | 4.24e-78 | 7 |
| corpus striatum | 8.93e-62 | 4 |
| striatum | 8.93e-62 | 4 |
| ventral part of telencephalon | 8.93e-62 | 4 |
| future corpus striatum | 8.93e-62 | 4 |
| basal ganglion | 9.01e-61 | 9 |
| nuclear complex of neuraxis | 9.01e-61 | 9 |
| aggregate regional part of brain | 9.01e-61 | 9 |
Showing 1 to 10 of 80 entries
