UBERON:0005215: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0005215
|name=kidney interstitium
|namespace=
|def="A portion of interstitial tissue that is part of a kidney [Obol]." [OBOL:automatic]
|xref=MA:00026...") |
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|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
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Revision as of 17:22, 15 June 2012
| Name: | kidney interstitium | ||
|---|---|---|---|
| Definition: | "A portion of interstitial tissue that is part of a kidney [Obol]." [OBOL:automatic] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003567(abdomen connective tissue),UBERON:0004120(mesoderm-derived structure),UBERON:0005169(interstitial tissue),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| part of: | UBERON:0002319 (mesangium),CL:1000500 (kidney interstitial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005215 (kidney interstitium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.34e-79 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_01ca9060c6fbd8557dede0407c1bdf94 | p@chr2:133426030..133426041, - |
| 2.34e-79 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_01ca9060c6fbd8557dede0407c1bdf94 | p@chr2:133426030..133426041, - |
| 3.49e-79 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_4a56a1e5b8b62c4df33ff36fce8027b3 | p23@TTC39A |
| 3.49e-79 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_4a56a1e5b8b62c4df33ff36fce8027b3 | p23@TTC39A |
| 2.03e-66 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_c139f43c92cafe2fd7560586be3cf5f4 | p@chr2:133426106..133426117, - |
| 2.03e-66 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_c139f43c92cafe2fd7560586be3cf5f4 | p@chr2:133426106..133426117, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:134535354..134535366,-#_22906cb64dadb69841af8870281b66a6 | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_22906cb64dadb69841af8870281b66a6 | p8@PAX2 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:134535354..134535366,-#_22906cb64dadb69841af8870281b66a6 | p@chr10:134535354..134535366, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_22906cb64dadb69841af8870281b66a6 | p8@PAX2 |
| 3.11e-50 | FFCP PHASE2:Hg19::chr17:17480803..17480814,-#_b96310fc1d8b46b4315c1a4f38de8954 | p19@PEMT |
| 3.11e-50 | FFCP PHASE1:Hg19::chr17:17480803..17480814,-#_b96310fc1d8b46b4315c1a4f38de8954 | p19@PEMT |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:81641483..81641491,-#_afdab313406b8d41e97443245d764735 | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_afdab313406b8d41e97443245d764735 | p10@PAX2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:81641483..81641491,-#_afdab313406b8d41e97443245d764735 | p@chr9:81641483..81641491, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_afdab313406b8d41e97443245d764735 | p10@PAX2 |
| 8.98e-41 | FFCP PHASE2:Hg19::chr17:171082..171101,+#_05dc0d3099ad71f7d8c44390ea4c680b | p@chr17:171082..171101, + |
| 8.98e-41 | FFCP PHASE1:Hg19::chr17:171082..171101,+#_05dc0d3099ad71f7d8c44390ea4c680b | p@chr17:171082..171101, + |
| 1.1e-40 | FFCP PHASE1:Hg19::chr3:172384246..172384250,+#_41a2b7ccff4c9a2ad5730271c5b1bf2f | p@chr3:172384246..172384250, + |
| 1.1e-40 | FFCP PHASE2:Hg19::chr3:172384246..172384250,+#_41a2b7ccff4c9a2ad5730271c5b1bf2f | p@chr3:172384246..172384250, + |
| 1.64e-40 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_5d8f8dff200bf10e34ad2c3e0a7f49ab | p@chr1:45087902..45087912, + |
| 1.64e-40 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_5d8f8dff200bf10e34ad2c3e0a7f49ab | p@chr1:45087902..45087912, + |
| 3.68e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_ca3d7639ce7b43e09280b8315badffd5 | p5@PAX2 |
| 3.68e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_ca3d7639ce7b43e09280b8315badffd5 | p5@PAX2 |
| 8.2e-37 | FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_fee0a251af2a0a3d304bd09e0d997ede | p6@PAX2 |
| 8.2e-37 | FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_fee0a251af2a0a3d304bd09e0d997ede | p6@PAX2 |
| 9.84e-37 | FFCP PHASE2:Hg19::chr9:126131131..126131159,+#_25ca27fa5f6544b09991a1655f585671 | p3@CRB2 |
| 9.84e-37 | FFCP PHASE1:Hg19::chr9:126131131..126131159,+#_25ca27fa5f6544b09991a1655f585671 | p3@CRB2 |
| 6.0e-34 | FFCP PHASE2:Hg19::chr2:113984760..113984792,+#_60cd15fafd9d511d069c8c6d033e532b | p@chr2:113984760..113984792, + |
| 6.0e-34 | FFCP PHASE1:Hg19::chr2:113984760..113984792,+#_60cd15fafd9d511d069c8c6d033e532b | p@chr2:113984760..113984792, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr7:27164585..27164612,-#_c1d9158e1375e0d44a9061b8d50991bd | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr11:555661..555679,+#_c1d9158e1375e0d44a9061b8d50991bd | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr1:858638..858648,+#_c1d9158e1375e0d44a9061b8d50991bd | p@chr1:858638..858648, + |
| 7.05e-34 | FFCP PHASE2:Hg19::chr7:27164585..27164612,-#_c1d9158e1375e0d44a9061b8d50991bd | p@chr7:27164585..27164612, - |
| 7.05e-34 | FFCP PHASE1:Hg19::chr11:555661..555679,+#_c1d9158e1375e0d44a9061b8d50991bd | p@chr11:555661..555679, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr1:858638..858648,+#_c1d9158e1375e0d44a9061b8d50991bd | p@chr1:858638..858648, + |
| 8.39e-34 | FFCP PHASE1:Hg19::chr10:73848549..73848564,-#_d4a1b526af466afb691eed9fc0e48d5e | p13@SPOCK2 |
| 8.39e-34 | FFCP PHASE2:Hg19::chr10:73848549..73848564,-#_d4a1b526af466afb691eed9fc0e48d5e | p13@SPOCK2 |
| 1.17e-33 | FFCP PHASE2:Hg19::chr11:118477144..118477156,+#_eb59961e095ea7e530cce2176bd71683 | p25@PHLDB1 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr11:118477144..118477156,+#_eb59961e095ea7e530cce2176bd71683 | p25@PHLDB1 |
| 3.35e-32 | FFCP PHASE1:Hg19::chr2:693362..693373,+#_3219e5605607052b771e77b835a4afc8 | p@chr2:693362..693373, + |
| 3.35e-32 | FFCP PHASE2:Hg19::chr2:693362..693373,+#_3219e5605607052b771e77b835a4afc8 | p@chr2:693362..693373, + |
| 2.54e-31 | FFCP PHASE1:Hg19::chrX:106146562..106146577,-#_2465b38d70f8c26dca35495451dacd76 | p1@RIPPLY1 |
| 2.54e-31 | FFCP PHASE2:Hg19::chrX:106146562..106146577,-#_2465b38d70f8c26dca35495451dacd76 | p1@RIPPLY1 |
| 8.05e-30 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_861455930ee9d24ec0feadda8d611bd2 | p@chr17:171147..171161, + |
| 8.05e-30 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_861455930ee9d24ec0feadda8d611bd2 | p@chr17:171147..171161, + |
| 2.96e-29 | FFCP PHASE2:Hg19::chr2:165477405..165477418,-#_6edf19a36913a3afc3a1e549ed084ab5 | p@chr2:165477405..165477418, - |
| 2.96e-29 | FFCP PHASE1:Hg19::chr2:165477405..165477418,-#_6edf19a36913a3afc3a1e549ed084ab5 | p@chr2:165477405..165477418, - |
| 4.55e-29 | FFCP PHASE2:Hg19::chr1:874109..874143,+#_4d879eeb52074a0e3410a805c0a7446d | p@chr1:874109..874143, + |
| 4.55e-29 | FFCP PHASE1:Hg19::chr1:874109..874143,+#_4d879eeb52074a0e3410a805c0a7446d | p@chr1:874109..874143, + |
| 1.43e-28 | FFCP PHASE1:Hg19::chr2:113999199..113999214,+#_f82ac557b1fb3f641f956b1407a15951 | p@chr2:113999199..113999214, + |
| 1.43e-28 | FFCP PHASE2:Hg19::chr2:113999199..113999214,+#_f82ac557b1fb3f641f956b1407a15951 | p@chr2:113999199..113999214, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_b1884027baad4849df6f6facb4d0f274 | p@chr16:86604624..86604648, + |
| 1.83e-27 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_b1884027baad4849df6f6facb4d0f274 | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_b1884027baad4849df6f6facb4d0f274 | p7@LRRN4 |
| 1.83e-27 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_b1884027baad4849df6f6facb4d0f274 | p@chr16:86604624..86604648, + |
| 2.74e-27 | FFCP PHASE2:Hg19::chr19:56091499..56091517,-#_37ea836b6192522b79c94aff1a59b79e | p@chr19:56091499..56091517, - |
| 2.74e-27 | FFCP PHASE1:Hg19::chr19:56091499..56091517,-#_37ea836b6192522b79c94aff1a59b79e | p@chr19:56091499..56091517, - |
| 2.78e-26 | FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_719eef740d93bd4d01ecc0c725b550ec | p@chr9:112260040..112260045, + |
| 2.78e-26 | FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_719eef740d93bd4d01ecc0c725b550ec | p@chr9:112260040..112260045, + |
| 4.63e-26 | FFCP PHASE1:Hg19::chr22:30645170..30645182,-#_1d4fc000ce0e17da6a27294b921f9e61 | p@chr22:30645170..30645182, - |
| 4.63e-26 | FFCP PHASE2:Hg19::chr22:30645170..30645182,-#_1d4fc000ce0e17da6a27294b921f9e61 | p@chr22:30645170..30645182, - |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22419319..22419327,+#_70d66e3761bab352df30c2ffd277c3e2 | p@chr8:22419319..22419327, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22419319..22419327,+#_70d66e3761bab352df30c2ffd277c3e2 | p@chr8:22419319..22419327, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr8:28196820..28196830,+#_5753dd723a7d4f1c7bbe748d94929280 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE1:Hg19::chr10:102505946..102505949,+#_5753dd723a7d4f1c7bbe748d94929280 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr2:176973165..176973169,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr20:6031540..6031548,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr11:32457397..32457404,-#_5753dd723a7d4f1c7bbe748d94929280 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr6:31833005..31833017,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE1:Hg19::chr17:15555143..15555150,-#_5753dd723a7d4f1c7bbe748d94929280 | p12@TRIM16 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr8:28196820..28196830,+#_5753dd723a7d4f1c7bbe748d94929280 | p@chr8:28196820..28196830, + |
| 9.18e-26 | FFCP PHASE2:Hg19::chr2:176973165..176973169,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr2:176973165..176973169, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr20:6031540..6031548,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr20:6031540..6031548, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr10:102505946..102505949,+#_5753dd723a7d4f1c7bbe748d94929280 | p14@PAX2 |
| 9.18e-26 | FFCP PHASE1:Hg19::chr6:31833005..31833017,-#_5753dd723a7d4f1c7bbe748d94929280 | p@chr6:31833005..31833017, - |
| 9.18e-26 | FFCP PHASE2:Hg19::chr11:32457397..32457404,-#_5753dd723a7d4f1c7bbe748d94929280 | p15@WT1 |
| 9.18e-26 | FFCP PHASE2:Hg19::chr17:15555143..15555150,-#_5753dd723a7d4f1c7bbe748d94929280 | p12@TRIM16 |
| 2.37e-25 | FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_6f55239a57be29d1989b42bf0c63afd7 | p1@ENST00000523364, p1@uc010kux.1 |
| 2.37e-25 | FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_6f55239a57be29d1989b42bf0c63afd7 | p1@ENST00000523364, p1@uc010kux.1 |
| 4.38e-25 | FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_d7ace7944c1226d4ec7f34ea10c70667 | p16@HOXA10 |
| 4.38e-25 | FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_d7ace7944c1226d4ec7f34ea10c70667 | p16@HOXA10 |
| 4.43e-25 | FFCP PHASE2:Hg19::chr1:149908263..149908281,-#_24a4f9f6ae1a09aa92d7cfb928160246 | p6@MTMR11 |
| 4.43e-25 | FFCP PHASE1:Hg19::chr1:149908263..149908281,-#_24a4f9f6ae1a09aa92d7cfb928160246 | p6@MTMR11 |
| 7.09e-25 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_7a5ff4ed3befe909cee1d15e160bd5a0 | p4@PAX2 |
| 7.09e-25 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_7a5ff4ed3befe909cee1d15e160bd5a0 | p4@PAX2 |
| 3.76e-24 | FFCP PHASE1:Hg19::chr1:46797583..46797614,-#_99a5aff28a17109cd2ea3144502bc684 | p@chr1:46797583..46797614, - |
| 3.76e-24 | FFCP PHASE2:Hg19::chr1:46797583..46797614,-#_99a5aff28a17109cd2ea3144502bc684 | p@chr1:46797583..46797614, - |
| 7.62e-24 | FFCP PHASE1:Hg19::chr6:94129519..94129544,+#_ff84ac020faffec43840226390fc14a4 | p@chr6:94129519..94129544, + |
| 7.62e-24 | FFCP PHASE2:Hg19::chr6:94129519..94129544,+#_ff84ac020faffec43840226390fc14a4 | p@chr6:94129519..94129544, + |
| 8.02e-24 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_39429a22a705f690c9d0a2e9d99415c0 | p@chr2:693380..693398, + |
| 8.02e-24 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_39429a22a705f690c9d0a2e9d99415c0 | p@chr2:693380..693398, + |
| 8.98e-24 | FFCP PHASE1:Hg19::chr2:133426077..133426103,-#_50178d33ae0437641e1a3ae348c5c5d7 | p@chr2:133426077..133426103, - |
| 8.98e-24 | FFCP PHASE2:Hg19::chr2:133426077..133426103,-#_50178d33ae0437641e1a3ae348c5c5d7 | p@chr2:133426077..133426103, - |
| 1.99e-23 | FFCP PHASE1:Hg19::chr11:32457350..32457361,+#_67461bd5e7524b33b55b1c54c0af41bf | p5@WT1-AS |
| 1.99e-23 | FFCP PHASE2:Hg19::chr11:32457350..32457361,+#_67461bd5e7524b33b55b1c54c0af41bf | p5@WT1-AS |
| 4.37e-23 | FFCP PHASE1:Hg19::chr2:176968471..176968476,-#_92342aae79d2d1f586453c9cbeedd3dc | p@chr2:176968471..176968476, - |
| 4.37e-23 | FFCP PHASE2:Hg19::chr2:176968471..176968476,-#_92342aae79d2d1f586453c9cbeedd3dc | p@chr2:176968471..176968476, - |
| 4.89e-23 | FFCP PHASE2:Hg19::chr12:15592437..15592438,+#_962b3e749956d6655be1faf6cd14670f | p1@ENST00000469884 |
| 4.89e-23 | FFCP PHASE1:Hg19::chr12:15592437..15592438,+#_962b3e749956d6655be1faf6cd14670f | p1@ENST00000469884 |
