FFCP PHASE1:Mm9::chr2:74530108..74530131,+: Difference between revisions
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|id=chr2:74530108..74530131,+ | |id=chr2:74530108..74530131,+ | ||
|ontology_enrichment_celltype=CL:0002612!1.85e-07!3 | |ontology_enrichment_celltype=CL:0002612!1.85e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.17e-38,3;CL:0002611,1.02e-25,2;CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000540,7.02e-10,33;CL:0000047,7.02e-10,33;CL:0000031,7.02e-10,33;CL:0000404,7.02e-10,33;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0002319,1.22e-07,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.75e-20!21;UBERON:0002113!6.17e-14!14;UBERON:0003918!6.17e-14!14;UBERON:0005095!6.17e-14!14;UBERON:0007687!6.17e-14!14;UBERON:0000474!3.37e-12!9;UBERON:0006554!7.12e-12!16;UBERON:0001948!2.90e-11!5;UBERON:0002315!2.90e-11!5;UBERON:0001008!5.01e-11!17;UBERON:0005156!6.81e-11!26;UBERON:0000990!6.81e-11!26;UBERON:0003134!1.83e-10!8;UBERON:0003133!3.77e-10!24;UBERON:0003100!1.06e-09!11;UBERON:0002240!2.82e-09!6;UBERON:0005174!2.82e-09!6;UBERON:0001137!2.82e-09!6;UBERON:0005795!1.91e-08!4;UBERON:0000995!1.91e-08!4;UBERON:0003103!7.33e-08!43;UBERON:0002257!1.85e-07!3;UBERON:0004176!7.33e-07!17;UBERON:0009196!7.33e-07!17;UBERON:0009117!7.33e-07!17 | |ontology_enrichment_uberon=UBERON:0000489!1.75e-20!21;UBERON:0002113!6.17e-14!14;UBERON:0003918!6.17e-14!14;UBERON:0005095!6.17e-14!14;UBERON:0007687!6.17e-14!14;UBERON:0000474!3.37e-12!9;UBERON:0006554!7.12e-12!16;UBERON:0001948!2.90e-11!5;UBERON:0002315!2.90e-11!5;UBERON:0001008!5.01e-11!17;UBERON:0005156!6.81e-11!26;UBERON:0000990!6.81e-11!26;UBERON:0003134!1.83e-10!8;UBERON:0003133!3.77e-10!24;UBERON:0003100!1.06e-09!11;UBERON:0002240!2.82e-09!6;UBERON:0005174!2.82e-09!6;UBERON:0001137!2.82e-09!6;UBERON:0005795!1.91e-08!4;UBERON:0000995!1.91e-08!4;UBERON:0003103!7.33e-08!43;UBERON:0002257!1.85e-07!3;UBERON:0004176!7.33e-07!17;UBERON:0009196!7.33e-07!17;UBERON:0009117!7.33e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.93e-63,5;UBERON:0002315,8.93e-63,5;UBERON:0002240,1.99e-52,6;UBERON:0005174,1.99e-52,6;UBERON:0001137,1.99e-52,6;UBERON:0002257,1.17e-38,3;UBERON:0003076,1.66e-26,12;UBERON:0003057,1.66e-26,12;UBERON:0002256,1.02e-25,2;UBERON:0000489,1.17e-21,21;UBERON:0003103,1.02e-10,43;UBERON:0002020,1.35e-09,34;UBERON:0001987,2.03e-07,2;UBERON:0003124,2.03e-07,2;UBERON:0004340,2.03e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.65042249141936,0,0,0,0,0,0,0,0,0,0,0,0,4.41942878210502,5.69486723196412,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.379419222745544,0.295220295959204,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0.299033092087958,0,0.583353565032143,0,0,0.469428954583016,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.549454872801795,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57085885963423,2.65042249141936,0,0,0,0,0,0,0,0,0,0,0,0,4.41942878210502,5.69486723196412,3.91438836233131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0.646703978798527,0.378212160335639,0.351902248327898,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.193952487167626,0.210407459670956,0.379419222745544,0.295220295959204,0.627994911365499,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0.129614973291793,0,0.56369293868419,0.299033092087958,0,0.583353565032143,0,0,0.469428954583016,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,0.549454872801795,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,0.399024873401031,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0.191288332068843,0,0 | ||
|short_description=p@chr2:74530108..74530131,+ | |short_description=p@chr2:74530108..74530131,+ | ||
}} | }} |
Revision as of 04:31, 14 November 2012
Short description: | p@chr2:74530108..74530131, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:74530108..74530131, + |
Coexpression cluster: | MCL_coexpression_mm9:1653 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.17e-38 | 3 |
neuron of the dorsal spinal cord | 1.02e-25 | 2 |
CNS neuron (sensu Vertebrata) | 4.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.90e-14 | 23 |
neuron | 7.02e-10 | 33 |
neuronal stem cell | 7.02e-10 | 33 |
neuroblast | 7.02e-10 | 33 |
electrically signaling cell | 7.02e-10 | 33 |
electrically responsive cell | 2.12e-08 | 39 |
electrically active cell | 2.12e-08 | 39 |
neural cell | 1.22e-07 | 43 |
ectodermal cell | 1.80e-07 | 44 |
neurectodermal cell | 1.80e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 8.93e-63 | 5 |
gray matter of spinal cord | 8.93e-63 | 5 |
spinal cord | 1.99e-52 | 6 |
dorsal region element | 1.99e-52 | 6 |
dorsum | 1.99e-52 | 6 |
ventral horn of spinal cord | 1.17e-38 | 3 |
posterior neural tube | 1.66e-26 | 12 |
chordal neural plate | 1.66e-26 | 12 |
dorsal horn of spinal cord | 1.02e-25 | 2 |
cavitated compound organ | 1.17e-21 | 21 |
compound organ | 1.02e-10 | 43 |
gray matter | 1.35e-09 | 34 |
placenta | 2.03e-07 | 2 |
chorion | 2.03e-07 | 2 |
allantois | 2.03e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.