FFCP PHASE1:Mm9::chr7:28869936..28869969,+: Difference between revisions
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|id=chr7:28869936..28869969,+ | |id=chr7:28869936..28869969,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.81e-14!9;CL:0002251!9.81e-14!9;CL:0000239!1.64e-10!6;CL:0000677!1.64e-10!6;CL:0000212!1.64e-10!6;CL:0000584!1.64e-10!6;CL:0000075!7.16e-09!7;CL:0002076!1.80e-07!15;CL:0000066!3.32e-07!25 | |ontology_enrichment_celltype=CL:0002563!9.81e-14!9;CL:0002251!9.81e-14!9;CL:0000239!1.64e-10!6;CL:0000677!1.64e-10!6;CL:0000212!1.64e-10!6;CL:0000584!1.64e-10!6;CL:0000075!7.16e-09!7;CL:0002076!1.80e-07!15;CL:0000066!3.32e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.94e-12,6;CL:0000677,1.94e-12,6;CL:0000584,1.94e-12,6;CL:0000075,1.27e-10,7;CL:0000682,2.37e-09,3;CL:0002563,3.37e-08,9;CL:0002251,3.37e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.05e-27!43;UBERON:0005409!2.28e-27!59;UBERON:0000344!2.05e-23!15;UBERON:0001242!2.81e-20!13;UBERON:0000060!2.81e-20!13;UBERON:0001262!2.81e-20!13;UBERON:0004786!2.81e-20!13;UBERON:0001007!4.04e-14!128;UBERON:0001555!4.04e-14!128;UBERON:0007026!4.04e-14!128;UBERON:0003350!9.81e-14!9;UBERON:0004808!9.81e-14!9;UBERON:0001277!9.81e-14!9;UBERON:0004119!9.81e-14!130;UBERON:0000925!9.81e-14!130;UBERON:0006595!9.81e-14!130;UBERON:0004923!4.59e-13!24;UBERON:0004921!1.96e-12!126;UBERON:0004185!1.96e-12!126;UBERON:0000485!7.04e-11!11 | |ontology_enrichment_uberon=UBERON:0000160!1.05e-27!43;UBERON:0005409!2.28e-27!59;UBERON:0000344!2.05e-23!15;UBERON:0001242!2.81e-20!13;UBERON:0000060!2.81e-20!13;UBERON:0001262!2.81e-20!13;UBERON:0004786!2.81e-20!13;UBERON:0001007!4.04e-14!128;UBERON:0001555!4.04e-14!128;UBERON:0007026!4.04e-14!128;UBERON:0003350!9.81e-14!9;UBERON:0004808!9.81e-14!9;UBERON:0001277!9.81e-14!9;UBERON:0004119!9.81e-14!130;UBERON:0000925!9.81e-14!130;UBERON:0006595!9.81e-14!130;UBERON:0004923!4.59e-13!24;UBERON:0004921!1.96e-12!126;UBERON:0004185!1.96e-12!126;UBERON:0000485!7.04e-11!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.28e-40,31;UBERON:0005409,1.58e-27,47;UBERON:0000344,9.37e-23,15;UBERON:0001242,8.90e-18,13;UBERON:0001262,8.90e-18,13;UBERON:0004786,8.90e-18,13;UBERON:0004923,2.02e-13,24;UBERON:0002108,5.52e-13,4;UBERON:0001007,9.93e-12,116;UBERON:0001555,9.93e-12,116;UBERON:0007026,9.93e-12,116;UBERON:0004119,1.91e-11,118;UBERON:0000925,1.91e-11,118;UBERON:0006595,1.91e-11,118;UBERON:0000331,4.58e-10,3;UBERON:0002116,4.58e-10,3;UBERON:0001204,4.58e-10,3;UBERON:0001168,4.58e-10,3;UBERON:0004921,1.14e-09,114;UBERON:0003350,3.37e-08,9;UBERON:0004808,3.37e-08,9;UBERON:0001277,3.37e-08,9;UBERON:0001155,1.54e-07,2;UBERON:0000059,1.54e-07,2;UBERON:0001962,5.89e-07,2;UBERON:0001961,5.89e-07,2;UBERON:0001744,5.89e-07,2 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,1.51232105653415,2.00358291978539,16.787927191189,24.2957146219347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.31979541542198,3.89995777814189,1.72269589234506,2.15380998079537,5.38678081714723,11.9714754257516,4.53654233567875,4.43461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,3.43785736662608,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,13.2868137232463,1.15289268306808,1.75934646160189,3.78017296878187,1.9496408711912,12.5834717211591,5.40345124686736,10.3553462092271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0.164140899745061,9.03590593552537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.384847366561318,0.116876902181569,0,0,0,0,0,0,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.909998478779072,1.51232105653415,2.00358291978539,16.787927191189,24.2957146219347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,4.31979541542198,3.89995777814189,1.72269589234506,2.15380998079537,5.38678081714723,11.9714754257516,4.53654233567875,4.43461021310609,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59088835757875,3.43785736662608,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.570676878337677,13.2868137232463,1.15289268306808,1.75934646160189,3.78017296878187,1.9496408711912,12.5834717211591,5.40345124686736,10.3553462092271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0,0.164140899745061,9.03590593552537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,5.05498395837992,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.384847366561318,0.116876902181569,0,0,0,0,0,0,2.74727436400898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:28869936..28869969,+ | |short_description=p@chr7:28869936..28869969,+ | ||
}} | }} |
Revision as of 18:05, 14 November 2012
Short description: | p@chr7:28869936..28869969, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28869936..28869969, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.94e-12 | 6 |
gut absorptive cell | 1.94e-12 | 6 |
enterocyte | 1.94e-12 | 6 |
columnar/cuboidal epithelial cell | 1.27e-10 | 7 |
M cell of gut | 2.37e-09 | 3 |
intestinal epithelial cell | 3.37e-08 | 9 |
epithelial cell of alimentary canal | 3.37e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.28e-40 | 31 |
gastrointestinal system | 1.58e-27 | 47 |
mucosa | 9.37e-23 | 15 |
intestinal mucosa | 8.90e-18 | 13 |
wall of intestine | 8.90e-18 | 13 |
gastrointestinal system mucosa | 8.90e-18 | 13 |
organ component layer | 2.02e-13 | 24 |
small intestine | 5.52e-13 | 4 |
digestive system | 9.93e-12 | 116 |
digestive tract | 9.93e-12 | 116 |
primitive gut | 9.93e-12 | 116 |
endoderm-derived structure | 1.91e-11 | 118 |
endoderm | 1.91e-11 | 118 |
presumptive endoderm | 1.91e-11 | 118 |
ileal mucosa | 4.58e-10 | 3 |
ileum | 4.58e-10 | 3 |
mucosa of small intestine | 4.58e-10 | 3 |
wall of small intestine | 4.58e-10 | 3 |
subdivision of digestive tract | 1.14e-09 | 114 |
epithelium of mucosa | 3.37e-08 | 9 |
gastrointestinal system epithelium | 3.37e-08 | 9 |
intestinal epithelium | 3.37e-08 | 9 |
colon | 1.54e-07 | 2 |
large intestine | 1.54e-07 | 2 |
gut-associated lymphoid tissue | 5.89e-07 | 2 |
mucosa-associated lymphoid tissue | 5.89e-07 | 2 |
lymphoid tissue | 5.89e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.