FFCP PHASE1:Hg19::chr2:74129552..74129589,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002594!1.71e-08!4 | |ontology_enrichment_celltype=CL:0002594!1.71e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002594;7.96e-19;4!CL:0002590;6.66e-07;3!CL:0002622;6.66e-07;3 | |ontology_enrichment_celltype_v019=CL:0002594;7.96e-19;4!CL:0002590;6.66e-07;3!CL:0002622;6.66e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002594,5.88e-19,4;CL:0002622,6.09e-07,3;CL:0002590,8.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.26e-10;2 | |ontology_enrichment_development_v019=UBERON:0007297;1.26e-10;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-12!115;UBERON:0000059!8.36e-10!11;UBERON:0001155!2.89e-09!9;UBERON:0000160!1.44e-08!27;UBERON:0001310!1.71e-08!4;UBERON:0003101!2.61e-08!22;UBERON:0000079!2.61e-08!22;UBERON:0005156!1.62e-07!59;UBERON:0000990!1.62e-07!59;UBERON:0005409!3.94e-07!35;UBERON:0000481!4.63e-07!347;UBERON:0006947!5.66e-07!3;UBERON:0004054!5.66e-07!3;UBERON:0001007!6.84e-07!155;UBERON:0001555!6.84e-07!155;UBERON:0007026!6.84e-07!155;UBERON:0004921!9.05e-07!129;UBERON:0004185!9.05e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-12!115;UBERON:0000059!8.36e-10!11;UBERON:0001155!2.89e-09!9;UBERON:0000160!1.44e-08!27;UBERON:0001310!1.71e-08!4;UBERON:0003101!2.61e-08!22;UBERON:0000079!2.61e-08!22;UBERON:0005156!1.62e-07!59;UBERON:0000990!1.62e-07!59;UBERON:0005409!3.94e-07!35;UBERON:0000481!4.63e-07!347;UBERON:0006947!5.66e-07!3;UBERON:0004054!5.66e-07!3;UBERON:0001007!6.84e-07!155;UBERON:0001555!6.84e-07!155;UBERON:0007026!6.84e-07!155;UBERON:0004921!9.05e-07!129;UBERON:0004185!9.05e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.53e-20;17!UBERON:0005409;3.36e-19;22!UBERON:0001310;7.96e-19;4!UBERON:0006947;3.39e-15;3!UBERON:0004054;3.39e-15;3!UBERON:0004921;3.90e-14;33!UBERON:0005904;1.61e-11;4!UBERON:0000059;5.34e-11;11!UBERON:0003101;1.16e-09;22!UBERON:0000079;1.16e-09;22!UBERON:0002108;4.09e-09;4!UBERON:0001155;7.43e-09;9!UBERON:0010260;1.96e-08;9!UBERON:0001555;1.36e-07;54!UBERON:0004175;1.41e-07;21!UBERON:0003135;2.92e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0000160;3.53e-20;17!UBERON:0005409;3.36e-19;22!UBERON:0001310;7.96e-19;4!UBERON:0006947;3.39e-15;3!UBERON:0004054;3.39e-15;3!UBERON:0004921;3.90e-14;33!UBERON:0005904;1.61e-11;4!UBERON:0000059;5.34e-11;11!UBERON:0003101;1.16e-09;22!UBERON:0000079;1.16e-09;22!UBERON:0002108;4.09e-09;4!UBERON:0001155;7.43e-09;9!UBERON:0010260;1.96e-08;9!UBERON:0001555;1.36e-07;54!UBERON:0004175;1.41e-07;21!UBERON:0003135;2.92e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.50e-20,17;UBERON:0001310,5.88e-19,4;UBERON:0005409,9.10e-17,25;UBERON:0006947,3.74e-15,3;UBERON:0004054,3.74e-15,3;UBERON:0005904,1.73e-11,4;UBERON:0000059,6.33e-11,11;UBERON:0003101,1.12e-09,22;UBERON:0000079,1.12e-09,22;UBERON:0002108,3.32e-09,4;UBERON:0005156,5.67e-09,59;UBERON:0000990,5.67e-09,59;UBERON:0001155,8.67e-09,9;UBERON:0010260,1.72e-08,9;UBERON:0001046,2.43e-08,19;UBERON:0007023,3.16e-08,114;UBERON:0003064,1.97e-07,28;UBERON:0003135,3.02e-07,11 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26295892981067,0.546273504020151,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,1.2655176988749,1.14378116354295,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0,0,0,3.44947640836597,4.957175969596,1.69017361519345,0,0.0982490410131212,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,1.10513566212459,0,0.102268682502155,0,0,0,0,0,16.9666657695526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8815482769626,3.09601475761687,32.9956278264158,0,0,0,0.067401132980677,0,0,0,0,0,7.10251925128903,8.46935012340647,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,8.43804443449249,0,1.35588444468319,0,0,0,0,0,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,1.45478927362048,0,0.464033759878494,3.18476710958893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.705351887381368,2.7562092961788,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0,0,0,0,0,0,0,13.3977018165109,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,2.90424443546902,0,0,17.3500156896804,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,7.62096690343672,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,1.77500563648273,6.55678681511872,0,27.4566120364374,0,0,0,0,0,0,0,0,0,0,0,17.5280733179164,0.458729283404541,0,0,0,0,5.81929524566941,0,0,0,0,0.109265571963696,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,11.7320471201727,1.22241444182866,18.717224202524,0.665756774185513,0.805095174364105,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0.175669571386252,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.245668634623536,0,1.18800285728205,0,0,0,0,0,0,0,0,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508681776931463,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26295892981067,0.546273504020151,1.70461739447251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,1.2655176988749,1.14378116354295,0,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.707027159768564,0,0,0,0,0,0,3.44947640836597,4.957175969596,1.69017361519345,0,0.0982490410131212,1.426684205925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,1.9924798825107,1.10513566212459,0,0.102268682502155,0,0,0,0,0,16.9666657695526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,24.8815482769626,3.09601475761687,32.9956278264158,0,0,0,0.067401132980677,0,0,0,0,0,7.10251925128903,8.46935012340647,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,8.43804443449249,0,1.35588444468319,0,0,0,0,0,5.33632486848381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,1.42939065274673,0,0,0,2.5926644736038,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,1.45478927362048,0,0.464033759878494,3.18476710958893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.705351887381368,2.7562092961788,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0,0,0,0,0,0,0,13.3977018165109,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,2.90424443546902,0,0,17.3500156896804,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0,0,0.430227358820278,0,0,7.62096690343672,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,1.77500563648273,6.55678681511872,0,27.4566120364374,0,0,0,0,0,0,0,0,0,0,0,17.5280733179164,0.458729283404541,0,0,0,0,5.81929524566941,0,0,0,0,0.109265571963696,0,0,0,0,0,0.682008283964155,0.267964130156178,0,0,0,0,0,0,0,0,0.404234377916439,0,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,11.7320471201727,1.22241444182866,18.717224202524,0.665756774185513,0.805095174364105,0 | ||
|short_description=p@chr2:74129552..74129589,- | |short_description=p@chr2:74129552..74129589,- | ||
}} | }} |
Revision as of 19:19, 15 November 2012
Short description: | p@chr2:74129552..74129589, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:74129552..74129589, - |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 5.88e-19 | 4 |
prostate stromal cell | 6.09e-07 | 3 |
smooth muscle cell of the brain vasculature | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.50e-20 | 17 |
umbilical artery | 5.88e-19 | 4 |
gastrointestinal system | 9.10e-17 | 25 |
male genital duct | 3.74e-15 | 3 |
internal male genitalia | 3.74e-15 | 3 |
duct of male reproductive system | 1.73e-11 | 4 |
large intestine | 6.33e-11 | 11 |
male organism | 1.12e-09 | 22 |
male reproductive system | 1.12e-09 | 22 |
small intestine | 3.32e-09 | 4 |
reproductive structure | 5.67e-09 | 59 |
reproductive system | 5.67e-09 | 59 |
colon | 8.67e-09 | 9 |
umbilical blood vessel | 1.72e-08 | 9 |
hindgut | 2.43e-08 | 19 |
adult organism | 3.16e-08 | 114 |
intermediate mesoderm | 1.97e-07 | 28 |
male reproductive organ | 3.02e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.