FFCP PHASE1:Hg19::chrX:49593888..49593929,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002541!5.46e-10!3;CL:0000039!1.48e-09!7;CL:0000586!1.48e-09!7;CL:0002322!9.75e-09!5 | |ontology_enrichment_celltype=CL:0002541!5.46e-10!3;CL:0000039!1.48e-09!7;CL:0000586!1.48e-09!7;CL:0002322!9.75e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;6.66e-22;3!CL:0002563;3.58e-08;4 | |ontology_enrichment_celltype_v019=CL:0002541;6.66e-22;3!CL:0002563;3.58e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.66e-22,3;CL:0002563,3.58e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.14e-15;2!UBERON:0003124;9.79e-09;1!UBERON:0005754;2.69e-08;1!UBERON:0005795;7.73e-07;10 | |ontology_enrichment_development_v019=UBERON:0007297;3.14e-15;2!UBERON:0003124;9.79e-09;1!UBERON:0005754;2.69e-08;1!UBERON:0005795;7.73e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;4.72e-08;1!DOID:10165;4.72e-08;1!DOID:1798;4.72e-08;1 | |ontology_enrichment_disease_v019=DOID:1799;4.72e-08;1!DOID:10165;4.72e-08;1!DOID:1798;4.72e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,4.41e-08,1;DOID:10165,4.41e-08,1;DOID:1798,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003135!2.20e-19!11;UBERON:0003101!1.84e-13!22;UBERON:0000079!1.84e-13!22;UBERON:0000473!7.52e-12!8;UBERON:0000476!5.46e-10!3;UBERON:0000920!5.46e-10!3;UBERON:0006947!5.46e-10!3;UBERON:0004054!5.46e-10!3;UBERON:0005156!2.18e-08!59;UBERON:0000990!2.18e-08!59;UBERON:0003133!3.29e-08!48;UBERON:0007023!1.37e-07!115;UBERON:0005904!1.45e-07!4;UBERON:0003124!2.64e-07!7;UBERON:0001052!3.38e-07!4;UBERON:0005631!4.00e-07!14;UBERON:0000158!4.00e-07!14 | |ontology_enrichment_uberon=UBERON:0003135!2.20e-19!11;UBERON:0003101!1.84e-13!22;UBERON:0000079!1.84e-13!22;UBERON:0000473!7.52e-12!8;UBERON:0000476!5.46e-10!3;UBERON:0000920!5.46e-10!3;UBERON:0006947!5.46e-10!3;UBERON:0004054!5.46e-10!3;UBERON:0005156!2.18e-08!59;UBERON:0000990!2.18e-08!59;UBERON:0003133!3.29e-08!48;UBERON:0007023!1.37e-07!115;UBERON:0005904!1.45e-07!4;UBERON:0003124!2.64e-07!7;UBERON:0001052!3.38e-07!4;UBERON:0005631!4.00e-07!14;UBERON:0000158!4.00e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.66e-22;3!UBERON:0000920;6.66e-22;3!UBERON:0006947;6.66e-22;3!UBERON:0004054;6.66e-22;3!UBERON:0005904;1.41e-16;4!UBERON:0003135;1.04e-15;11!UBERON:0003101;1.04e-14;22!UBERON:0000079;1.04e-14;22!UBERON:0005631;2.32e-11;10!UBERON:0000158;2.32e-11;10!UBERON:0001301;1.22e-08;1!UBERON:0001000;2.02e-08;1!UBERON:0005352;2.02e-08;1!UBERON:0000998;2.69e-08;1!UBERON:0006868;2.69e-08;1!UBERON:0000473;2.94e-08;8!UBERON:0005795;3.21e-08;1!UBERON:0001242;3.58e-08;4!UBERON:0001262;3.58e-08;4!UBERON:0004786;3.58e-08;4!UBERON:0004808;3.58e-08;4!UBERON:0001277;3.58e-08;4!UBERON:0006834;3.97e-08;1!UBERON:0000478;3.67e-07;24!UBERON:0000058;6.44e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0003124;6.66e-22;3!UBERON:0000920;6.66e-22;3!UBERON:0006947;6.66e-22;3!UBERON:0004054;6.66e-22;3!UBERON:0005904;1.41e-16;4!UBERON:0003135;1.04e-15;11!UBERON:0003101;1.04e-14;22!UBERON:0000079;1.04e-14;22!UBERON:0005631;2.32e-11;10!UBERON:0000158;2.32e-11;10!UBERON:0001301;1.22e-08;1!UBERON:0001000;2.02e-08;1!UBERON:0005352;2.02e-08;1!UBERON:0000998;2.69e-08;1!UBERON:0006868;2.69e-08;1!UBERON:0000473;2.94e-08;8!UBERON:0005795;3.21e-08;1!UBERON:0001242;3.58e-08;4!UBERON:0001262;3.58e-08;4!UBERON:0004786;3.58e-08;4!UBERON:0004808;3.58e-08;4!UBERON:0001277;3.58e-08;4!UBERON:0006834;3.97e-08;1!UBERON:0000478;3.67e-07;24!UBERON:0000058;6.44e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.66e-22,3;UBERON:0006947,6.66e-22,3;UBERON:0004054,6.66e-22,3;UBERON:0003124,1.33e-16,7;UBERON:0005904,1.41e-16,4;UBERON:0003135,1.03e-15,11;UBERON:0003101,1.03e-14,22;UBERON:0000079,1.03e-14,22;UBERON:0005631,1.90e-12,14;UBERON:0000158,1.90e-12,14;UBERON:0005156,4.54e-10,59;UBERON:0000990,4.54e-10,59;UBERON:0001301,1.22e-08,1;UBERON:0001000,2.02e-08,1;UBERON:0005352,2.02e-08,1;UBERON:0000998,2.69e-08,1;UBERON:0006868,2.69e-08,1;UBERON:0000473,2.90e-08,8;UBERON:0001242,3.58e-08,4;UBERON:0001262,3.58e-08,4;UBERON:0004786,3.58e-08,4;UBERON:0004808,3.58e-08,4;UBERON:0001277,3.58e-08,4;UBERON:0006834,3.83e-08,1;UBERON:0003133,3.89e-08,48;UBERON:0000478,3.62e-07,24;UBERON:0004175,6.64e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.0827279756598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76812917713084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,312.729470350837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,314.440294594442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,1.43246690842614,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,18.9062401598209,0,14.7760425813931,16.9070614657917,32.8835360312686,45.8409907376026,0,0,0,0,0.19606253431774,0,0,0,0,0,52.8660487162939,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,19.3346357396201,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,257.896562325236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.8983456970389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,10.4846354574708,0.315132729228895,0.164831716762333,0.13480708770837,0,0,1.59045937961861,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0.551639951094387,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,3.0255760305528,0,2.61906694481422,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,672.009156352152,0,0,0,0,0,0,37.5196983825457,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5483856061097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05673990496671,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,9.62389467371641,2.14371304124943,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,3.78948476966886,9.35861210126198,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.0827279756598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76812917713084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,312.729470350837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,314.440294594442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,1.43246690842614,0.296964680832639,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.307801034015188,0,18.9062401598209,0,14.7760425813931,16.9070614657917,32.8835360312686,45.8409907376026,0,0,0,0,0.19606253431774,0,0,0,0,0,52.8660487162939,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,19.3346357396201,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,257.896562325236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.8983456970389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,10.4846354574708,0.315132729228895,0.164831716762333,0.13480708770837,0,0,1.59045937961861,0,0.160753148465019,0,0.83088067605837,0,0,0,0,0.551639951094387,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.27857558193737,3.0255760305528,0,2.61906694481422,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,672.009156352152,0,0,0,0,0,0,37.5196983825457,0,0.840816489941367,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5483856061097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05673990496671,0,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0.250707539292375,9.62389467371641,2.14371304124943,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,3.78948476966886,9.35861210126198,0,0,0 | ||
|short_description=p1@PAGE4 | |short_description=p1@PAGE4 | ||
}} | }} |
Revision as of 17:57, 17 November 2012
Short description: | p1@PAGE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PAGE4_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000218068, NM_007003, uc004don.1_5end |
EntrezGene: | PAGE4 |
HGNC: | 4108 |
UniProt: | O60829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.66e-22 | 3 |
intestinal epithelial cell | 3.58e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.66e-22 | 3 |
male genital duct | 6.66e-22 | 3 |
internal male genitalia | 6.66e-22 | 3 |
chorion | 1.33e-16 | 7 |
duct of male reproductive system | 1.41e-16 | 4 |
male reproductive organ | 1.03e-15 | 11 |
male organism | 1.03e-14 | 22 |
male reproductive system | 1.03e-14 | 22 |
extraembryonic membrane | 1.90e-12 | 14 |
membranous layer | 1.90e-12 | 14 |
reproductive structure | 4.54e-10 | 59 |
reproductive system | 4.54e-10 | 59 |
epididymis | 1.22e-08 | 1 |
vas deferens | 2.02e-08 | 1 |
spermatic cord | 2.02e-08 | 1 |
seminal vesicle | 2.69e-08 | 1 |
seminal fluid secreting gland | 2.69e-08 | 1 |
testis | 2.90e-08 | 8 |
intestinal mucosa | 3.58e-08 | 4 |
wall of intestine | 3.58e-08 | 4 |
gastrointestinal system mucosa | 3.58e-08 | 4 |
gastrointestinal system epithelium | 3.58e-08 | 4 |
intestinal epithelium | 3.58e-08 | 4 |
uterus or analog | 3.83e-08 | 1 |
reproductive organ | 3.89e-08 | 48 |
extraembryonic structure | 3.62e-07 | 24 |
internal genitalia | 6.64e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.41e-08 | 1 |
endocrine pancreas cancer | 4.41e-08 | 1 |
pancreatic endocrine carcinoma | 4.41e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.