FFCP PHASE1:Hg19::chr16:34378172..34378187,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!7.12e-19!7;CL:0000586!7.12e-19!7;CL:1000415!1.50e-08!2;CL:0000054!2.67e-08!2;CL:0000137!2.67e-08!2;CL:0000092!2.67e-08!2 | |ontology_enrichment_celltype=CL:0000039!7.12e-19!7;CL:0000586!7.12e-19!7;CL:1000415!1.50e-08!2;CL:0000054!2.67e-08!2;CL:0000137!2.67e-08!2;CL:0000092!2.67e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.13e-17;7!CL:0000586;5.13e-17;7!CL:1000415;1.78e-15;2 | |ontology_enrichment_celltype_v019=CL:0000039;5.13e-17;7!CL:0000586;5.13e-17;7!CL:1000415;1.78e-15;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.57e-17,7;CL:0000586,5.57e-17,7;CL:1000415,1.78e-15,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.45e-26;10!UBERON:0005564;3.45e-26;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.45e-26;10!UBERON:0005564;3.45e-26;10 | ||
|ontology_enrichment_disease=DOID:0060085!2.75e-15!1;DOID:3165!2.75e-15!1;DOID:0060121!2.75e-15!1;DOID:2438!2.75e-15!1;DOID:4418!2.75e-15!1;DOID:200!2.67e-08!2;DOID:4305!2.67e-08!2 | |ontology_enrichment_disease=DOID:0060085!2.75e-15!1;DOID:3165!2.75e-15!1;DOID:0060121!2.75e-15!1;DOID:2438!2.75e-15!1;DOID:4418!2.75e-15!1;DOID:200!2.67e-08!2;DOID:4305!2.67e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;5.23e-07;5 | |ontology_enrichment_disease_v019=DOID:4362;5.23e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.03e-17!8;UBERON:0001282!1.78e-15!1;UBERON:0009842!1.78e-15!1;UBERON:0003704!1.78e-15!1;UBERON:0001171!1.78e-15!1;UBERON:0001172!1.78e-15!1;UBERON:0003135!1.90e-12!11;UBERON:0002294!4.04e-09!7;UBERON:0001173!4.04e-09!7;UBERON:0004912!4.04e-09!7;UBERON:0002323!8.25e-08!46;UBERON:0004458!2.51e-07!49;UBERON:0000991!8.94e-07!21;UBERON:0009196!8.94e-07!21;UBERON:0009117!8.94e-07!21;UBERON:0005564!8.94e-07!21 | |ontology_enrichment_uberon=UBERON:0000473!7.03e-17!8;UBERON:0001282!1.78e-15!1;UBERON:0009842!1.78e-15!1;UBERON:0003704!1.78e-15!1;UBERON:0001171!1.78e-15!1;UBERON:0001172!1.78e-15!1;UBERON:0003135!1.90e-12!11;UBERON:0002294!4.04e-09!7;UBERON:0001173!4.04e-09!7;UBERON:0004912!4.04e-09!7;UBERON:0002323!8.25e-08!46;UBERON:0004458!2.51e-07!49;UBERON:0000991!8.94e-07!21;UBERON:0009196!8.94e-07!21;UBERON:0009117!8.94e-07!21;UBERON:0005564!8.94e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.67e-32;8!UBERON:0003135;6.87e-24;11!UBERON:0000991;6.71e-13;21!UBERON:0003101;2.40e-12;22!UBERON:0000079;2.40e-12;22!UBERON:0002110;8.99e-11;3!UBERON:0002323;2.00e-08;45!UBERON:0003133;2.91e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.67e-32;8!UBERON:0003135;6.87e-24;11!UBERON:0000991;6.71e-13;21!UBERON:0003101;2.40e-12;22!UBERON:0000079;2.40e-12;22!UBERON:0002110;8.99e-11;3!UBERON:0002323;2.00e-08;45!UBERON:0003133;2.91e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.97e-32,8;UBERON:0003135,7.72e-24,11;UBERON:0000991,7.13e-13,21;UBERON:0009196,7.13e-13,21;UBERON:0009117,7.13e-13,21;UBERON:0005564,7.13e-13,21;UBERON:0004176,2.54e-12,22;UBERON:0003101,2.54e-12,22;UBERON:0000079,2.54e-12,22;UBERON:0002110,8.99e-11,3;UBERON:0006242,8.99e-11,3;UBERON:0002323,2.33e-10,46;UBERON:0003133,5.74e-10,48;UBERON:0004458,9.39e-10,49;UBERON:0003886,6.83e-09,54;UBERON:0005156,3.43e-08,59;UBERON:0000990,3.43e-08,59;UBERON:0002553,6.40e-08,61 | |||
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|short_description=p@chr16:34378172..34378187,+ | |short_description=p@chr16:34378172..34378187,+ | ||
}} | }} |
Revision as of 00:41, 18 November 2012
Short description: | p@chr16:34378172..34378187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:34378172..34378187, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.57e-17 | 7 |
germ cell | 5.57e-17 | 7 |
epithelial cell of gall bladder | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.97e-32 | 8 |
male reproductive organ | 7.72e-24 | 11 |
gonad | 7.13e-13 | 21 |
indifferent external genitalia | 7.13e-13 | 21 |
indifferent gonad | 7.13e-13 | 21 |
gonad primordium | 7.13e-13 | 21 |
external genitalia | 2.54e-12 | 22 |
male organism | 2.54e-12 | 22 |
male reproductive system | 2.54e-12 | 22 |
gallbladder | 8.99e-11 | 3 |
gall bladder primordium | 8.99e-11 | 3 |
body cavity | 2.33e-10 | 46 |
reproductive organ | 5.74e-10 | 48 |
body cavity or lining | 9.39e-10 | 49 |
body cavity precursor | 6.83e-09 | 54 |
reproductive structure | 3.43e-08 | 59 |
reproductive system | 3.43e-08 | 59 |
anatomical cavity | 6.40e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.08e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.