FFCP PHASE1:Hg19::chr2:105719440..105719472,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.06e-28!254;CL:0000039!3.47e-14!7;CL:0000586!3.47e-14!7;CL:0000076!4.90e-11!62;CL:0002076!9.13e-10!43;CL:1000507!5.25e-09!12;CL:1000494!5.25e-09!12;CL:1000497!6.39e-09!18;CL:0002518!6.39e-09!18;CL:0002681!2.12e-08!13;CL:0002584!2.12e-08!13;CL:1000449!3.36e-08!16;CL:0000223!8.12e-08!59;CL:0002541!2.04e-07!3;CL:0000349!8.11e-07!3;CL:0002577!8.11e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.06e-28!254;CL:0000039!3.47e-14!7;CL:0000586!3.47e-14!7;CL:0000076!4.90e-11!62;CL:0002076!9.13e-10!43;CL:1000507!5.25e-09!12;CL:1000494!5.25e-09!12;CL:1000497!6.39e-09!18;CL:0002518!6.39e-09!18;CL:0002681!2.12e-08!13;CL:0002584!2.12e-08!13;CL:1000449!3.36e-08!16;CL:0000223!8.12e-08!59;CL:0002541!2.04e-07!3;CL:0000349!8.11e-07!3;CL:0002577!8.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.89e-28;19!CL:0002541;1.81e-18;3!CL:0000039;1.08e-13;7!CL:0000586;1.08e-13;7!CL:0002536;3.23e-12;2!CL:0002537;9.24e-11;5!CL:0002577;1.04e-08;3!CL:0002563;9.48e-07;4 | |ontology_enrichment_celltype_v019=CL:0000349;1.89e-28;19!CL:0002541;1.81e-18;3!CL:0000039;1.08e-13;7!CL:0000586;1.08e-13;7!CL:0002536;3.23e-12;2!CL:0002537;9.24e-11;5!CL:0002577;1.04e-08;3!CL:0002563;9.48e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.70e-28,19;CL:0002541,2.22e-18,3;CL:0000039,8.34e-14,7;CL:0000586,8.34e-14,7;CL:0002536,4.30e-12,2;CL:0002537,9.24e-11,5;CL:0000066,5.20e-09,253;CL:0002577,1.19e-08,3;CL:0002563,8.95e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.54e-14;10!UBERON:0005564;1.54e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;1.54e-14;10!UBERON:0005564;1.54e-14;10 | ||
|ontology_enrichment_disease=DOID:305!2.73e-21!106;DOID:0050687!2.77e-19!143;DOID:1749!1.13e-18!14;DOID:162!4.74e-11!235;DOID:14566!1.59e-10!239;DOID:3095!6.99e-07!22;DOID:2994!6.99e-07!22 | |ontology_enrichment_disease=DOID:305!2.73e-21!106;DOID:0050687!2.77e-19!143;DOID:1749!1.13e-18!14;DOID:162!4.74e-11!235;DOID:14566!1.59e-10!239;DOID:3095!6.99e-07!22;DOID:2994!6.99e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.69e-19;14!DOID:1799;2.84e-07;1!DOID:10165;2.84e-07;1!DOID:1798;2.84e-07;1 | |ontology_enrichment_disease_v019=DOID:1749;1.69e-19;14!DOID:1799;2.84e-07;1!DOID:10165;2.84e-07;1!DOID:1798;2.84e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,1.79e-19,14;DOID:305,1.40e-10,106;DOID:0050687,3.98e-08,143;DOID:1799,2.37e-07,1;DOID:10165,2.37e-07,1;DOID:1798,2.37e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.01e-19!14;UBERON:0000158!2.01e-19!14;UBERON:0003124!3.40e-14!7;UBERON:0006554!6.90e-13!44;UBERON:0001008!1.79e-12!45;UBERON:0002113!4.19e-10!27;UBERON:0003918!4.19e-10!27;UBERON:0005095!4.19e-10!27;UBERON:0007687!4.19e-10!27;UBERON:0004923!4.63e-10!57;UBERON:0003886!5.22e-10!63;UBERON:0000478!5.94e-10!24;UBERON:0005156!5.95e-10!59;UBERON:0000990!5.95e-10!59;UBERON:0003729!7.30e-10!5;UBERON:0000344!1.94e-09!12;UBERON:0000473!2.38e-09!8;UBERON:0000489!2.81e-09!32;UBERON:0000464!3.87e-09!104;UBERON:0009773!5.25e-09!12;UBERON:0001231!5.25e-09!12;UBERON:0004810!5.25e-09!12;UBERON:0003133!1.20e-08!48;UBERON:0001987!1.87e-08!4;UBERON:0004340!1.87e-08!4;UBERON:0002553!2.07e-08!70;UBERON:0001225!2.12e-08!13;UBERON:0008987!2.12e-08!13;UBERON:0003343!2.35e-08!4;UBERON:0004785!2.35e-08!4;UBERON:0001851!2.83e-08!16;UBERON:0004211!3.36e-08!16;UBERON:0001285!3.36e-08!16;UBERON:0007684!3.36e-08!16;UBERON:0003220!3.36e-08!16;UBERON:0004208!3.36e-08!16;UBERON:0003064!9.27e-08!37;UBERON:0006555!1.32e-07!17;UBERON:0005103!1.32e-07!17;UBERON:0000083!1.32e-07!17;UBERON:0009201!1.32e-07!17;UBERON:0004819!1.32e-07!17;UBERON:0006553!1.32e-07!17;UBERON:0003074!1.32e-07!17;UBERON:0003060!1.32e-07!17;UBERON:0000466!1.43e-07!126;UBERON:0000305!1.75e-07!7;UBERON:0000476!2.04e-07!3;UBERON:0000920!2.04e-07!3;UBERON:0003101!3.90e-07!22;UBERON:0000079!3.90e-07!22;UBERON:0000080!4.43e-07!18;UBERON:0002120!4.43e-07!18;UBERON:0004875!4.43e-07!18;UBERON:0005721!4.43e-07!18;UBERON:0005754!4.43e-07!18;UBERON:0007297!4.43e-07!18;UBERON:0000058!9.08e-07!26 | |ontology_enrichment_uberon=UBERON:0005631!2.01e-19!14;UBERON:0000158!2.01e-19!14;UBERON:0003124!3.40e-14!7;UBERON:0006554!6.90e-13!44;UBERON:0001008!1.79e-12!45;UBERON:0002113!4.19e-10!27;UBERON:0003918!4.19e-10!27;UBERON:0005095!4.19e-10!27;UBERON:0007687!4.19e-10!27;UBERON:0004923!4.63e-10!57;UBERON:0003886!5.22e-10!63;UBERON:0000478!5.94e-10!24;UBERON:0005156!5.95e-10!59;UBERON:0000990!5.95e-10!59;UBERON:0003729!7.30e-10!5;UBERON:0000344!1.94e-09!12;UBERON:0000473!2.38e-09!8;UBERON:0000489!2.81e-09!32;UBERON:0000464!3.87e-09!104;UBERON:0009773!5.25e-09!12;UBERON:0001231!5.25e-09!12;UBERON:0004810!5.25e-09!12;UBERON:0003133!1.20e-08!48;UBERON:0001987!1.87e-08!4;UBERON:0004340!1.87e-08!4;UBERON:0002553!2.07e-08!70;UBERON:0001225!2.12e-08!13;UBERON:0008987!2.12e-08!13;UBERON:0003343!2.35e-08!4;UBERON:0004785!2.35e-08!4;UBERON:0001851!2.83e-08!16;UBERON:0004211!3.36e-08!16;UBERON:0001285!3.36e-08!16;UBERON:0007684!3.36e-08!16;UBERON:0003220!3.36e-08!16;UBERON:0004208!3.36e-08!16;UBERON:0003064!9.27e-08!37;UBERON:0006555!1.32e-07!17;UBERON:0005103!1.32e-07!17;UBERON:0000083!1.32e-07!17;UBERON:0009201!1.32e-07!17;UBERON:0004819!1.32e-07!17;UBERON:0006553!1.32e-07!17;UBERON:0003074!1.32e-07!17;UBERON:0003060!1.32e-07!17;UBERON:0000466!1.43e-07!126;UBERON:0000305!1.75e-07!7;UBERON:0000476!2.04e-07!3;UBERON:0000920!2.04e-07!3;UBERON:0003101!3.90e-07!22;UBERON:0000079!3.90e-07!22;UBERON:0000080!4.43e-07!18;UBERON:0002120!4.43e-07!18;UBERON:0004875!4.43e-07!18;UBERON:0005721!4.43e-07!18;UBERON:0005754!4.43e-07!18;UBERON:0007297!4.43e-07!18;UBERON:0000058!9.08e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.52e-35;10!UBERON:0000158;1.52e-35;10!UBERON:0000478;3.73e-22;24!UBERON:0000305;5.58e-20;7!UBERON:0003124;1.81e-18;3!UBERON:0000920;1.81e-18;3!UBERON:0000473;3.21e-18;8!UBERON:0003135;3.39e-13;11!UBERON:0003101;4.31e-09;22!UBERON:0000079;4.31e-09;22!UBERON:0004923;6.86e-08;55!UBERON:0004913;8.18e-07;1!UBERON:0003703;8.18e-07;1!UBERON:0001174;8.18e-07;1!UBERON:0004914;8.18e-07;1!UBERON:0000991;8.66e-07;21!UBERON:0001242;9.48e-07;4!UBERON:0001262;9.48e-07;4!UBERON:0004786;9.48e-07;4!UBERON:0004808;9.48e-07;4!UBERON:0001277;9.48e-07;4!UBERON:0001987;9.89e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.52e-35;10!UBERON:0000158;1.52e-35;10!UBERON:0000478;3.73e-22;24!UBERON:0000305;5.58e-20;7!UBERON:0003124;1.81e-18;3!UBERON:0000920;1.81e-18;3!UBERON:0000473;3.21e-18;8!UBERON:0003135;3.39e-13;11!UBERON:0003101;4.31e-09;22!UBERON:0000079;4.31e-09;22!UBERON:0004923;6.86e-08;55!UBERON:0004913;8.18e-07;1!UBERON:0003703;8.18e-07;1!UBERON:0001174;8.18e-07;1!UBERON:0004914;8.18e-07;1!UBERON:0000991;8.66e-07;21!UBERON:0001242;9.48e-07;4!UBERON:0001262;9.48e-07;4!UBERON:0004786;9.48e-07;4!UBERON:0004808;9.48e-07;4!UBERON:0001277;9.48e-07;4!UBERON:0001987;9.89e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.09e-39,14;UBERON:0000158,5.09e-39,14;UBERON:0000478,4.93e-22,24;UBERON:0003124,8.94e-21,7;UBERON:0000305,6.83e-20,7;UBERON:0000920,2.22e-18,3;UBERON:0000473,2.50e-18,8;UBERON:0004871,2.17e-17,8;UBERON:0004923,4.40e-14,66;UBERON:0003135,2.83e-13,11;UBERON:0003101,4.01e-09,22;UBERON:0000079,4.01e-09,22;UBERON:0000991,7.92e-07,21;UBERON:0009196,7.92e-07,21;UBERON:0009117,7.92e-07,21;UBERON:0005564,7.92e-07,21;UBERON:0001242,8.95e-07,4;UBERON:0001262,8.95e-07,4;UBERON:0004786,8.95e-07,4;UBERON:0004808,8.95e-07,4;UBERON:0001277,8.95e-07,4 | |||
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| ||
|short_description=p1@ENST00000449177 | |short_description=p1@ENST00000449177 | ||
}} | }} |
Revision as of 09:59, 18 November 2012
Short description: | p1@ENST00000449177 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000449177_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_ENST00000449177_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.70e-28 | 19 |
chorionic membrane mesenchymal stem cell | 2.22e-18 | 3 |
germ line cell | 8.34e-14 | 7 |
germ cell | 8.34e-14 | 7 |
amniotic epithelial cell | 4.30e-12 | 2 |
amnion mesenchymal stem cell | 9.24e-11 | 5 |
epithelial cell | 5.20e-09 | 253 |
placental epithelial cell | 1.19e-08 | 3 |
intestinal epithelial cell | 8.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.09e-39 | 14 |
membranous layer | 5.09e-39 | 14 |
extraembryonic structure | 4.93e-22 | 24 |
chorion | 8.94e-21 | 7 |
amnion | 6.83e-20 | 7 |
egg chorion | 2.22e-18 | 3 |
testis | 2.50e-18 | 8 |
somatic layer of lateral plate mesoderm | 2.17e-17 | 8 |
organ component layer | 4.40e-14 | 66 |
male reproductive organ | 2.83e-13 | 11 |
male organism | 4.01e-09 | 22 |
male reproductive system | 4.01e-09 | 22 |
gonad | 7.92e-07 | 21 |
indifferent external genitalia | 7.92e-07 | 21 |
indifferent gonad | 7.92e-07 | 21 |
gonad primordium | 7.92e-07 | 21 |
intestinal mucosa | 8.95e-07 | 4 |
wall of intestine | 8.95e-07 | 4 |
gastrointestinal system mucosa | 8.95e-07 | 4 |
gastrointestinal system epithelium | 8.95e-07 | 4 |
intestinal epithelium | 8.95e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.79e-19 | 14 |
carcinoma | 1.40e-10 | 106 |
cell type cancer | 3.98e-08 | 143 |
islet cell tumor | 2.37e-07 | 1 |
endocrine pancreas cancer | 2.37e-07 | 1 |
pancreatic endocrine carcinoma | 2.37e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.