FFCP PHASE1:Hg19::chr11:117947724..117947735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0002076!2.18e-23!43;CL:0000223!1.02e-17!59;CL:0000066!1.66e-13!254;CL:0002368!4.77e-10!13;CL:0002251!5.11e-10!21 | |ontology_enrichment_celltype=CL:0002076!2.18e-23!43;CL:0000223!1.02e-17!59;CL:0000066!1.66e-13!254;CL:0002368!4.77e-10!13;CL:0002251!5.11e-10!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.10e-09;42!CL:1000507;2.57e-08;10!CL:1000494;2.57e-08;10!CL:0000575;1.33e-07;2 | |ontology_enrichment_celltype_v019=CL:0002076;3.10e-09;42!CL:1000507;2.57e-08;10!CL:1000494;2.57e-08;10!CL:0000575;1.33e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.11e-12,42;CL:0000223,2.27e-09,58;CL:0000066,4.52e-09,253;CL:1000507,2.92e-08,10;CL:1000494,2.92e-08,10;CL:0000575,9.99e-08,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!1.07e-18!14;DOID:305!4.78e-14!106;DOID:0050687!3.76e-09!143;DOID:299!9.40e-09!25 | |ontology_enrichment_disease=DOID:1749!1.07e-18!14;DOID:305!4.78e-14!106;DOID:0050687!3.76e-09!143;DOID:299!9.40e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:299;7.24e-12;25!DOID:1749;3.94e-08;14!DOID:3493;6.40e-08;2 | |ontology_enrichment_disease_v019=DOID:299;7.24e-12;25!DOID:1749;3.94e-08;14!DOID:3493;6.40e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:299,7.97e-12,25;DOID:305,7.10e-10,106;DOID:1749,3.62e-08,14;DOID:3493,4.70e-08,2;DOID:0050687,9.26e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.32e-25!169;UBERON:0000925!7.32e-25!169;UBERON:0006595!7.32e-25!169;UBERON:0001007!1.31e-19!155;UBERON:0001555!1.31e-19!155;UBERON:0007026!1.31e-19!155;UBERON:0004921!2.06e-18!129;UBERON:0004185!2.06e-18!129;UBERON:0000077!7.14e-13!130;UBERON:0005409!6.83e-12!35;UBERON:0001004!2.39e-11!72;UBERON:0000160!9.30e-11!27;UBERON:0000464!7.28e-10!104;UBERON:0001046!1.84e-09!19;UBERON:0000065!3.91e-09!53;UBERON:0000161!6.28e-09!35;UBERON:0000466!8.65e-09!126;UBERON:0001008!1.21e-08!45;UBERON:0005911!2.16e-08!82;UBERON:0000344!2.18e-08!12;UBERON:0005178!2.94e-08!34;UBERON:0002224!2.94e-08!34;UBERON:0000059!4.20e-08!11;UBERON:0005181!6.42e-08!35;UBERON:0006554!9.89e-08!44;UBERON:0000974!1.37e-07!10;UBERON:0003343!3.72e-07!4;UBERON:0004785!3.72e-07!4;UBERON:0001041!6.22e-07!98;UBERON:0002294!7.23e-07!7;UBERON:0001173!7.23e-07!7;UBERON:0004912!7.23e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!7.32e-25!169;UBERON:0000925!7.32e-25!169;UBERON:0006595!7.32e-25!169;UBERON:0001007!1.31e-19!155;UBERON:0001555!1.31e-19!155;UBERON:0007026!1.31e-19!155;UBERON:0004921!2.06e-18!129;UBERON:0004185!2.06e-18!129;UBERON:0000077!7.14e-13!130;UBERON:0005409!6.83e-12!35;UBERON:0001004!2.39e-11!72;UBERON:0000160!9.30e-11!27;UBERON:0000464!7.28e-10!104;UBERON:0001046!1.84e-09!19;UBERON:0000065!3.91e-09!53;UBERON:0000161!6.28e-09!35;UBERON:0000466!8.65e-09!126;UBERON:0001008!1.21e-08!45;UBERON:0005911!2.16e-08!82;UBERON:0000344!2.18e-08!12;UBERON:0005178!2.94e-08!34;UBERON:0002224!2.94e-08!34;UBERON:0000059!4.20e-08!11;UBERON:0005181!6.42e-08!35;UBERON:0006554!9.89e-08!44;UBERON:0000974!1.37e-07!10;UBERON:0003343!3.72e-07!4;UBERON:0004785!3.72e-07!4;UBERON:0001041!6.22e-07!98;UBERON:0002294!7.23e-07!7;UBERON:0001173!7.23e-07!7;UBERON:0004912!7.23e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.96e-26;22!UBERON:0004921;8.69e-22;33!UBERON:0000160;4.53e-21;17!UBERON:0002108;9.09e-12;4!UBERON:0000059;1.25e-10;11!UBERON:0001155;1.83e-09;9!UBERON:0001555;2.83e-09;54!UBERON:0004211;2.57e-08;10!UBERON:0009773;2.57e-08;10!UBERON:0001231;2.57e-08;10!UBERON:0004810;2.57e-08;10!UBERON:0002294;5.96e-08;7!UBERON:0001173;5.96e-08;7!UBERON:0006562;1.10e-07;2!UBERON:0006554;1.52e-07;30!UBERON:0001008;1.52e-07;30!UBERON:0000945;6.41e-07;5!UBERON:0010039;6.41e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0005409;1.96e-26;22!UBERON:0004921;8.69e-22;33!UBERON:0000160;4.53e-21;17!UBERON:0002108;9.09e-12;4!UBERON:0000059;1.25e-10;11!UBERON:0001155;1.83e-09;9!UBERON:0001555;2.83e-09;54!UBERON:0004211;2.57e-08;10!UBERON:0009773;2.57e-08;10!UBERON:0001231;2.57e-08;10!UBERON:0004810;2.57e-08;10!UBERON:0002294;5.96e-08;7!UBERON:0001173;5.96e-08;7!UBERON:0006562;1.10e-07;2!UBERON:0006554;1.52e-07;30!UBERON:0001008;1.52e-07;30!UBERON:0000945;6.41e-07;5!UBERON:0010039;6.41e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.38e-23,25;UBERON:0000160,3.34e-21,17;UBERON:0004119,9.01e-15,160;UBERON:0000925,9.01e-15,160;UBERON:0006595,9.01e-15,160;UBERON:0004921,7.04e-13,118;UBERON:0001007,2.02e-12,145;UBERON:0001555,2.02e-12,145;UBERON:0007026,2.02e-12,145;UBERON:0002108,7.74e-12,4;UBERON:0000059,1.16e-10,11;UBERON:0001155,1.76e-09,9;UBERON:0004810,2.92e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,3.27865759463288,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0.644566922551274,0,0,0,2.70719767744447,4.00479752942957,0,0,1.05551628892876,0,0,0,0,0,0,4.33289664176565,2.49322802678617,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,0.893288987462089,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,0,0.564862804660675,0,1.68471475667626,5.32116184244011,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.796991953004279,2.48655523978033,0,0,0,0,0.359473404589307,1.79021174675609,0,9.86434056369336,0,0,0,0,0,0,0.0874599999961957,0,2.04828206913899,5.59358030644086,0,0,0,0,0,0,0,0,0,0,0,2.09135616417905,1.23120413606075,0,0,0.0897576444097721,1.52106320690811,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,29.3819054686466,1.69623685720729,0,12.9384051040206,2.38835424159016,9.77648231893801,0,0,0,0,0,0,0,3.7176277597097,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,3.72371110174635,0.522355239482415,0,0,0,0,0,5.81934098930517,0,2.03382666702479,0,0,0,1.56441106187842,0,4.26905989478705,0,6.19588793762656,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,1.18208560948797,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.533937062838473,0,0.828478110694391,0,0,0,3.83004754662109,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18330626556461,0.11796972334774,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,22.0305568463397,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.863424021355654,0,1.68163297988273,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,10.5144105889925,30.8191733551863,1.82876887473404,0,0,0,0,0,0,0,0.33883824611688,0,0,5.7108876999879,4.80831033108706,0,0.735444965261716,0,0,0,0,0,0,0,0,1.96409332466223,1.41157948686277,0.240724100067505,1.46067277649303,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0.509944148709909,0,1.37842349302267,0,0.0757786982182394,0,0,0,3.19850972851471,0.476128862927481,0,0.124149428591716,0,0,0,1.52401723527873,0,4.10847523388984,5.37916540445073,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,3.99454064511308,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0.90361775633475,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,3.27865759463288,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95172252503473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0.644566922551274,0,0,0,2.70719767744447,4.00479752942957,0,0,1.05551628892876,0,0,0,0,0,0,4.33289664176565,2.49322802678617,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,0.893288987462089,1.71968227454435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,1.34060455107157,0,0.564862804660675,0,1.68471475667626,5.32116184244011,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.796991953004279,2.48655523978033,0,0,0,0,0.359473404589307,1.79021174675609,0,9.86434056369336,0,0,0,0,0,0,0.0874599999961957,0,2.04828206913899,5.59358030644086,0,0,0,0,0,0,0,0,0,0,0,2.09135616417905,1.23120413606075,0,0,0.0897576444097721,1.52106320690811,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,29.3819054686466,1.69623685720729,0,12.9384051040206,2.38835424159016,9.77648231893801,0,0,0,0,0,0,0,3.7176277597097,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,1.21491816834592,3.72371110174635,0.522355239482415,0,0,0,0,0,5.81934098930517,0,2.03382666702479,0,0,0,1.56441106187842,0,4.26905989478705,0,6.19588793762656,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.670869375198532,1.18208560948797,0.524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.533937062838473,0,0.828478110694391,0,0,0,3.83004754662109,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.18330626556461,0.11796972334774,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,22.0305568463397,0,0,0,0,0,0,0,0,1.91643641459393,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.863424021355654,0,1.68163297988273,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,10.5144105889925,30.8191733551863,1.82876887473404,0,0,0,0,0,0,0,0.33883824611688,0,0,5.7108876999879,4.80831033108706,0,0.735444965261716,0,0,0,0,0,0,0,0,1.96409332466223,1.41157948686277,0.240724100067505,1.46067277649303,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0.509944148709909,0,1.37842349302267,0,0.0757786982182394,0,0,0,3.19850972851471,0.476128862927481,0,0.124149428591716,0,0,0,1.52401723527873,0,4.10847523388984,5.37916540445073,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,3.99454064511308,0,0 | ||
|short_description=p2@TMPRSS4 | |short_description=p2@TMPRSS4 | ||
}} | }} |
Revision as of 15:37, 18 November 2012
Short description: | p2@TMPRSS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TMPRSS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001083947, NM_001173551, NM_001173552, NM_019894, uc010rxo.1, uc010rxp.1_5end |
EntrezGene: | TMPRSS4 |
HGNC: | 11878 |
UniProt: | Q9NRS4B7Z8X1B7Z900B7Z8C5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.11e-12 | 42 |
endodermal cell | 2.27e-09 | 58 |
epithelial cell | 4.52e-09 | 253 |
kidney tubule cell | 2.92e-08 | 10 |
nephron tubule epithelial cell | 2.92e-08 | 10 |
corneal epithelial cell | 9.99e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.38e-23 | 25 |
intestine | 3.34e-21 | 17 |
endoderm-derived structure | 9.01e-15 | 160 |
endoderm | 9.01e-15 | 160 |
presumptive endoderm | 9.01e-15 | 160 |
subdivision of digestive tract | 7.04e-13 | 118 |
digestive system | 2.02e-12 | 145 |
digestive tract | 2.02e-12 | 145 |
primitive gut | 2.02e-12 | 145 |
small intestine | 7.74e-12 | 4 |
large intestine | 1.16e-10 | 11 |
colon | 1.76e-09 | 9 |
nephron tubule epithelium | 2.92e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 7.97e-12 | 25 |
carcinoma | 7.10e-10 | 106 |
squamous cell carcinoma | 3.62e-08 | 14 |
signet ring cell adenocarcinoma | 4.70e-08 | 2 |
cell type cancer | 9.26e-07 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.