FFCP PHASE1:Hg19::chr20:22559375..22559383,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!2.57e-24!12;CL:0000417!2.57e-24!12;CL:0000668!2.57e-24!12;CL:0000414!2.57e-24!12;CL:0000412!2.57e-24!12;CL:0000182!2.57e-24!12;CL:0000223!1.80e-07!59 | |ontology_enrichment_celltype=CL:0000181!2.57e-24!12;CL:0000417!2.57e-24!12;CL:0000668!2.57e-24!12;CL:0000414!2.57e-24!12;CL:0000412!2.57e-24!12;CL:0000182!2.57e-24!12;CL:0000223!1.80e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.22e-14;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.22e-14;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.75e-07;11!UBERON:0009847;2.12e-07;3!UBERON:0003353;2.12e-07;3 | |ontology_enrichment_development_v019=UBERON:0004161;1.75e-07;11!UBERON:0009847;2.12e-07;3!UBERON:0003353;2.12e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!7.52e-25!25;UBERON:0000015!7.52e-25!25;UBERON:0002423!7.52e-25!25;UBERON:0006235!7.52e-25!25;UBERON:0004161!7.52e-25!25;UBERON:0008835!6.45e-20!22;UBERON:0003894!6.45e-20!22;UBERON:0009854!5.75e-19!23;UBERON:0002107!6.38e-19!19;UBERON:0006925!6.38e-19!19;UBERON:0008836!6.38e-19!19;UBERON:0007499!2.70e-17!25;UBERON:0009856!1.48e-16!26;UBERON:0005057!1.95e-16!26;UBERON:0003929!3.87e-14!54;UBERON:0005911!8.81e-13!82;UBERON:0002368!1.01e-11!35;UBERON:0000466!1.27e-11!126;UBERON:0004119!1.54e-11!169;UBERON:0000925!1.54e-11!169;UBERON:0006595!1.54e-11!169;UBERON:0001041!1.87e-11!98;UBERON:0004921!3.56e-11!129;UBERON:0004185!3.56e-11!129;UBERON:0000077!3.91e-11!130;UBERON:0002365!5.61e-11!31;UBERON:0002330!5.61e-11!31;UBERON:0000949!1.12e-10!45;UBERON:0001007!1.13e-10!155;UBERON:0001555!1.13e-10!155;UBERON:0007026!1.13e-10!155;UBERON:0005177!3.63e-10!107;UBERON:0005172!5.34e-10!55;UBERON:0005173!5.34e-10!55;UBERON:0002417!8.86e-09!61;UBERON:0000916!8.86e-09!61;UBERON:0009569!3.45e-08!113;UBERON:0000002!9.04e-08!6;UBERON:0001560!9.04e-08!6;UBERON:0002530!1.21e-07!59;UBERON:0001048!1.86e-07!168;UBERON:0002110!5.38e-07!3;UBERON:0006242!5.38e-07!3 | |ontology_enrichment_uberon=UBERON:0009497!7.52e-25!25;UBERON:0000015!7.52e-25!25;UBERON:0002423!7.52e-25!25;UBERON:0006235!7.52e-25!25;UBERON:0004161!7.52e-25!25;UBERON:0008835!6.45e-20!22;UBERON:0003894!6.45e-20!22;UBERON:0009854!5.75e-19!23;UBERON:0002107!6.38e-19!19;UBERON:0006925!6.38e-19!19;UBERON:0008836!6.38e-19!19;UBERON:0007499!2.70e-17!25;UBERON:0009856!1.48e-16!26;UBERON:0005057!1.95e-16!26;UBERON:0003929!3.87e-14!54;UBERON:0005911!8.81e-13!82;UBERON:0002368!1.01e-11!35;UBERON:0000466!1.27e-11!126;UBERON:0004119!1.54e-11!169;UBERON:0000925!1.54e-11!169;UBERON:0006595!1.54e-11!169;UBERON:0001041!1.87e-11!98;UBERON:0004921!3.56e-11!129;UBERON:0004185!3.56e-11!129;UBERON:0000077!3.91e-11!130;UBERON:0002365!5.61e-11!31;UBERON:0002330!5.61e-11!31;UBERON:0000949!1.12e-10!45;UBERON:0001007!1.13e-10!155;UBERON:0001555!1.13e-10!155;UBERON:0007026!1.13e-10!155;UBERON:0005177!3.63e-10!107;UBERON:0005172!5.34e-10!55;UBERON:0005173!5.34e-10!55;UBERON:0002417!8.86e-09!61;UBERON:0000916!8.86e-09!61;UBERON:0009569!3.45e-08!113;UBERON:0000002!9.04e-08!6;UBERON:0001560!9.04e-08!6;UBERON:0002530!1.21e-07!59;UBERON:0001048!1.86e-07!168;UBERON:0002110!5.38e-07!3;UBERON:0006242!5.38e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.91e-19;1!UBERON:0006518;3.91e-19;1!UBERON:0008949;3.91e-19;1!UBERON:0000101;3.91e-19;1!UBERON:0002167;3.91e-19;1!UBERON:0002107;1.58e-15;19!UBERON:0006925;1.58e-15;19!UBERON:0002423;6.86e-12;25!UBERON:0002365;5.79e-10;31!UBERON:0002330;5.79e-10;31!UBERON:0000949;7.14e-09;43!UBERON:0002368;4.13e-08;33!UBERON:0005172;5.38e-07;52!UBERON:0005173;5.38e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002171;3.91e-19;1!UBERON:0006518;3.91e-19;1!UBERON:0008949;3.91e-19;1!UBERON:0000101;3.91e-19;1!UBERON:0002167;3.91e-19;1!UBERON:0002107;1.58e-15;19!UBERON:0006925;1.58e-15;19!UBERON:0002423;6.86e-12;25!UBERON:0002365;5.79e-10;31!UBERON:0002330;5.79e-10;31!UBERON:0000949;7.14e-09;43!UBERON:0002368;4.13e-08;33!UBERON:0005172;5.38e-07;52!UBERON:0005173;5.38e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.91e-19,1;UBERON:0006518,3.91e-19,1;UBERON:0008949,3.91e-19,1;UBERON:0000101,3.91e-19,1;UBERON:0002167,3.91e-19,1;UBERON:0002107,1.50e-15,19;UBERON:0006925,1.50e-15,19;UBERON:0008836,1.50e-15,19;UBERON:0008835,1.75e-13,22;UBERON:0003894,1.75e-13,22;UBERON:0009854,6.50e-13,23;UBERON:0007499,6.57e-12,25;UBERON:0009497,6.57e-12,25;UBERON:0000015,6.57e-12,25;UBERON:0002423,6.57e-12,25;UBERON:0006235,6.57e-12,25;UBERON:0004161,6.57e-12,25;UBERON:0009856,1.83e-11,26;UBERON:0000949,3.87e-10,45;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0002368,1.35e-08,35;UBERON:0003929,1.83e-08,54;UBERON:0005172,1.93e-08,54;UBERON:0005173,1.93e-08,54;UBERON:0005177,2.00e-08,101;UBERON:0005911,8.81e-08,82;UBERON:0002530,9.54e-08,59;UBERON:0002417,1.34e-07,60;UBERON:0000916,1.34e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2908046891511,0,0,0.755798243562828,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0.247247575143499,0.337017719270924,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0.342173675768659,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67063626243828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.63757624423474,0.397901550322736,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,1.96565443335525,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.2908046891511,0,0,0.755798243562828,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.426905989478705,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.0787831823072236,0.247247575143499,0.337017719270924,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17241786942466,0,0,0,0.342173675768659,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67063626243828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,1.63757624423474,0.397901550322736,0,0.11294608203896,0,0,0.231522474323834,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LINC00261 | |short_description=p2@LINC00261 | ||
}} | }} |
Revision as of 17:14, 18 November 2012
Short description: | p2@LINC00261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LINC00261_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -95bp_to_ENST00000450346, NR_001558, uc010zsp.1_5end |
EntrezGene: | LINC00261 |
HGNC: | 16189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.91e-19 | 1 |
right lung lobe | 3.91e-19 | 1 |
lower lobe of lung | 3.91e-19 | 1 |
lobe of lung | 3.91e-19 | 1 |
right lung | 3.91e-19 | 1 |
liver | 1.50e-15 | 19 |
digestive gland | 1.50e-15 | 19 |
liver bud | 1.50e-15 | 19 |
hepatic diverticulum | 1.75e-13 | 22 |
liver primordium | 1.75e-13 | 22 |
digestive tract diverticulum | 6.50e-13 | 23 |
epithelial sac | 6.57e-12 | 25 |
epithelium of foregut-midgut junction | 6.57e-12 | 25 |
anatomical boundary | 6.57e-12 | 25 |
hepatobiliary system | 6.57e-12 | 25 |
foregut-midgut junction | 6.57e-12 | 25 |
septum transversum | 6.57e-12 | 25 |
sac | 1.83e-11 | 26 |
endocrine system | 3.87e-10 | 45 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
endocrine gland | 1.35e-08 | 35 |
gut epithelium | 1.83e-08 | 54 |
abdomen element | 1.93e-08 | 54 |
abdominal segment element | 1.93e-08 | 54 |
trunk region element | 2.00e-08 | 101 |
endo-epithelium | 8.81e-08 | 82 |
gland | 9.54e-08 | 59 |
abdominal segment of trunk | 1.34e-07 | 60 |
abdomen | 1.34e-07 | 60 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.