FFCP PHASE1:Hg19::chr14:52164820..52164841,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002574!3.79e-08!1 | |ontology_enrichment_celltype=CL:0002574!3.79e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.33e-29;1!UBERON:0007297;1.54e-15;2!UBERON:0009847;1.09e-10;3!UBERON:0003353;1.09e-10;3 | |ontology_enrichment_development_v019=UBERON:0005754;1.33e-29;1!UBERON:0007297;1.54e-15;2!UBERON:0009847;1.09e-10;3!UBERON:0003353;1.09e-10;3 | ||
|ontology_enrichment_disease=DOID:4235!2.46e-08!1 | |ontology_enrichment_disease=DOID:4235!2.46e-08!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.23e-23!3;UBERON:0004054!5.23e-23!3;UBERON:0005904!2.09e-17!4;UBERON:0003135!5.62e-11!11;UBERON:0006834!5.59e-09!1;UBERON:0001000!6.03e-09!1;UBERON:0005352!6.03e-09!1;UBERON:0000998!6.50e-09!1;UBERON:0006868!6.50e-09!1;UBERON:0001301!1.27e-08!1;UBERON:0003101!3.03e-08!22;UBERON:0000079!3.03e-08!22;UBERON:0007023!3.25e-08!115;UBERON:0004175!2.58e-07!25;UBERON:0005156!7.10e-07!59;UBERON:0000990!7.10e-07!59 | |ontology_enrichment_uberon=UBERON:0006947!5.23e-23!3;UBERON:0004054!5.23e-23!3;UBERON:0005904!2.09e-17!4;UBERON:0003135!5.62e-11!11;UBERON:0006834!5.59e-09!1;UBERON:0001000!6.03e-09!1;UBERON:0005352!6.03e-09!1;UBERON:0000998!6.50e-09!1;UBERON:0006868!6.50e-09!1;UBERON:0001301!1.27e-08!1;UBERON:0003101!3.03e-08!22;UBERON:0000079!3.03e-08!22;UBERON:0007023!3.25e-08!115;UBERON:0004175!2.58e-07!25;UBERON:0005156!7.10e-07!59;UBERON:0000990!7.10e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-38;3!UBERON:0004054;1.01e-38;3!UBERON:0006834;7.48e-30;1!UBERON:0001000;9.99e-30;1!UBERON:0005352;9.99e-30;1!UBERON:0000998;1.33e-29;1!UBERON:0006868;1.33e-29;1!UBERON:0005904;2.37e-29;4!UBERON:0004175;3.74e-22;21!UBERON:0001255;2.37e-15;2!UBERON:0001556;2.37e-15;2!UBERON:0000058;2.12e-12;10!UBERON:0003101;2.54e-12;22!UBERON:0000079;2.54e-12;22!UBERON:0003135;2.30e-11;11!UBERON:0003937;2.03e-10;12!UBERON:0005399;2.03e-10;12!UBERON:0000995;1.09e-07;17!UBERON:0003133;1.26e-07;44!UBERON:0003975;2.60e-07;18!UBERON:0005156;6.96e-07;59!UBERON:0000990;6.96e-07;59 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-38;3!UBERON:0004054;1.01e-38;3!UBERON:0006834;7.48e-30;1!UBERON:0001000;9.99e-30;1!UBERON:0005352;9.99e-30;1!UBERON:0000998;1.33e-29;1!UBERON:0006868;1.33e-29;1!UBERON:0005904;2.37e-29;4!UBERON:0004175;3.74e-22;21!UBERON:0001255;2.37e-15;2!UBERON:0001556;2.37e-15;2!UBERON:0000058;2.12e-12;10!UBERON:0003101;2.54e-12;22!UBERON:0000079;2.54e-12;22!UBERON:0003135;2.30e-11;11!UBERON:0003937;2.03e-10;12!UBERON:0005399;2.03e-10;12!UBERON:0000995;1.09e-07;17!UBERON:0003133;1.26e-07;44!UBERON:0003975;2.60e-07;18!UBERON:0005156;6.96e-07;59!UBERON:0000990;6.96e-07;59 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.01e-38,3;UBERON:0004054,1.01e-38,3;UBERON:0006834,7.48e-30,1;UBERON:0001000,9.99e-30,1;UBERON:0005352,9.99e-30,1;UBERON:0000998,1.33e-29,1;UBERON:0006868,1.33e-29,1;UBERON:0005904,2.37e-29,4;UBERON:0004175,1.04e-18,25;UBERON:0001255,2.05e-15,2;UBERON:0001556,2.05e-15,2;UBERON:0005156,2.28e-12,59;UBERON:0000990,2.28e-12,59;UBERON:0003101,2.64e-12,22;UBERON:0000079,2.64e-12,22;UBERON:0003135,2.30e-11,11;UBERON:0003937,2.13e-10,12;UBERON:0005399,2.13e-10,12;UBERON:0003133,5.35e-10,48;UBERON:0003064,8.81e-10,28;UBERON:0007023,3.49e-09,114;UBERON:0000162,5.15e-09,14;UBERON:0001353,5.15e-09,14;UBERON:0000163,5.15e-09,14;UBERON:0006866,5.15e-09,14;UBERON:0000164,5.15e-09,14;UBERON:0000931,5.15e-09,14;UBERON:0004122,1.78e-08,15;UBERON:0000058,5.66e-07,19;UBERON:0001046,6.97e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77091602723542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50403165248208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,11.4906957531894,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,1.67693789582787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77091602723542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,6.31335044559025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50403165248208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,11.4906957531894,0.406896178315738,0,0,0 | ||
|short_description=p25@FRMD6 | |short_description=p25@FRMD6 | ||
}} | }} |
Revision as of 13:54, 19 November 2012
Short description: | p25@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_FRMD6_5end |
Coexpression cluster: | C233_uterus_cervix_ovary_epididymis_colon_rectum_MCF7 |
Association with transcript: | 0bp_to_ENST00000554167, uc001wze.2_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | G3V4T7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.01e-38 | 3 |
internal male genitalia | 1.01e-38 | 3 |
uterus or analog | 7.48e-30 | 1 |
vas deferens | 9.99e-30 | 1 |
spermatic cord | 9.99e-30 | 1 |
seminal vesicle | 1.33e-29 | 1 |
seminal fluid secreting gland | 1.33e-29 | 1 |
duct of male reproductive system | 2.37e-29 | 4 |
internal genitalia | 1.04e-18 | 25 |
urinary bladder | 2.05e-15 | 2 |
lower urinary tract | 2.05e-15 | 2 |
reproductive structure | 2.28e-12 | 59 |
reproductive system | 2.28e-12 | 59 |
male organism | 2.64e-12 | 22 |
male reproductive system | 2.64e-12 | 22 |
male reproductive organ | 2.30e-11 | 11 |
sex gland | 2.13e-10 | 12 |
male reproductive gland | 2.13e-10 | 12 |
reproductive organ | 5.35e-10 | 48 |
intermediate mesoderm | 8.81e-10 | 28 |
adult organism | 3.49e-09 | 114 |
cloaca | 5.15e-09 | 14 |
anal region | 5.15e-09 | 14 |
embryonic cloaca | 5.15e-09 | 14 |
terminal part of digestive tract | 5.15e-09 | 14 |
primitive urogenital sinus | 5.15e-09 | 14 |
proctodeum | 5.15e-09 | 14 |
genitourinary system | 1.78e-08 | 15 |
duct | 5.66e-07 | 19 |
hindgut | 6.97e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.