FFCP PHASE1:Hg19::chr20:22544041..22544045,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!1.11e-19!12;CL:0000417!1.11e-19!12;CL:0000668!1.11e-19!12;CL:0000414!1.11e-19!12;CL:0000412!1.11e-19!12;CL:0000182!1.11e-19!12;CL:0002322!7.32e-09!5 | |ontology_enrichment_celltype=CL:0000181!1.11e-19!12;CL:0000417!1.11e-19!12;CL:0000668!1.11e-19!12;CL:0000414!1.11e-19!12;CL:0000412!1.11e-19!12;CL:0000182!1.11e-19!12;CL:0002322!7.32e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.47e-22;12!CL:0002535;1.71e-09;2 | |ontology_enrichment_celltype_v019=CL:0000182;2.47e-22;12!CL:0002535;1.71e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.15e-22,12;CL:0002535,2.02e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.32e-14;11!UBERON:0009497;5.06e-12;13!UBERON:0009847;9.64e-07;3!UBERON:0003353;9.64e-07;3 | |ontology_enrichment_development_v019=UBERON:0004161;4.32e-14;11!UBERON:0009497;5.06e-12;13!UBERON:0009847;9.64e-07;3!UBERON:0003353;9.64e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;3.48e-14;5 | |ontology_enrichment_disease_v019=DOID:4362;3.48e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4362,3.84e-14,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;5.23e-31;19!UBERON:0006925;5.23e-31;19!UBERON:0002423;1.46e-23;25!UBERON:0002365;6.85e-18;31!UBERON:0002330;6.85e-18;31!UBERON:0002368;7.51e-17;33!UBERON:0000002;5.52e-12;6!UBERON:0001560;5.52e-12;6!UBERON:0000949;1.89e-11;43!UBERON:0006955;1.71e-09;2!UBERON:0004801;1.71e-09;2!UBERON:0002530;5.46e-08;57!UBERON:0005172;7.07e-08;52!UBERON:0005173;7.07e-08;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;5.23e-31;19!UBERON:0006925;5.23e-31;19!UBERON:0002423;1.46e-23;25!UBERON:0002365;6.85e-18;31!UBERON:0002330;6.85e-18;31!UBERON:0002368;7.51e-17;33!UBERON:0000002;5.52e-12;6!UBERON:0001560;5.52e-12;6!UBERON:0000949;1.89e-11;43!UBERON:0006955;1.71e-09;2!UBERON:0004801;1.71e-09;2!UBERON:0002530;5.46e-08;57!UBERON:0005172;7.07e-08;52!UBERON:0005173;7.07e-08;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.47e-31,19;UBERON:0006925,4.47e-31,19;UBERON:0008836,4.47e-31,19;UBERON:0008835,7.73e-27,22;UBERON:0003894,7.73e-27,22;UBERON:0009854,1.14e-25,23;UBERON:0007499,1.30e-23,25;UBERON:0009497,1.30e-23,25;UBERON:0000015,1.30e-23,25;UBERON:0002423,1.30e-23,25;UBERON:0006235,1.30e-23,25;UBERON:0004161,1.30e-23,25;UBERON:0009856,1.05e-22,26;UBERON:0002365,4.97e-19,31;UBERON:0002330,4.97e-19,31;UBERON:0002368,7.63e-17,35;UBERON:0003929,1.34e-14,54;UBERON:0002530,2.49e-13,59;UBERON:0000949,4.54e-13,45;UBERON:0000002,6.00e-12,6;UBERON:0001560,6.00e-12,6;UBERON:0005172,7.34e-11,54;UBERON:0005173,7.34e-11,54;UBERON:0002417,9.39e-10,60;UBERON:0000916,9.39e-10,60;UBERON:0005911,1.77e-09,82;UBERON:0006955,2.02e-09,2;UBERON:0004801,2.02e-09,2 | |||
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|short_description=p@chr20:22544041..22544045,- | |short_description=p@chr20:22544041..22544045,- | ||
}} | }} |
Revision as of 10:27, 21 November 2012
Short description: | p@chr20:22544041..22544045, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:22544041..22544045, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.15e-22 | 12 |
epithelial cell of cervix | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 4.47e-31 | 19 |
digestive gland | 4.47e-31 | 19 |
liver bud | 4.47e-31 | 19 |
hepatic diverticulum | 7.73e-27 | 22 |
liver primordium | 7.73e-27 | 22 |
digestive tract diverticulum | 1.14e-25 | 23 |
epithelial sac | 1.30e-23 | 25 |
epithelium of foregut-midgut junction | 1.30e-23 | 25 |
anatomical boundary | 1.30e-23 | 25 |
hepatobiliary system | 1.30e-23 | 25 |
foregut-midgut junction | 1.30e-23 | 25 |
septum transversum | 1.30e-23 | 25 |
sac | 1.05e-22 | 26 |
exocrine gland | 4.97e-19 | 31 |
exocrine system | 4.97e-19 | 31 |
endocrine gland | 7.63e-17 | 35 |
gut epithelium | 1.34e-14 | 54 |
gland | 2.49e-13 | 59 |
endocrine system | 4.54e-13 | 45 |
uterine cervix | 6.00e-12 | 6 |
neck of organ | 6.00e-12 | 6 |
abdomen element | 7.34e-11 | 54 |
abdominal segment element | 7.34e-11 | 54 |
abdominal segment of trunk | 9.39e-10 | 60 |
abdomen | 9.39e-10 | 60 |
endo-epithelium | 1.77e-09 | 82 |
uterine epithelium | 2.02e-09 | 2 |
cervix epithelium | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.84e-14 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.