FFCP PHASE1:Hg19::chr11:125821678..125821700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=S | |||
|UniProt=E9PP39 | |UniProt=E9PP39 | ||
|association_with_transcript=0bp_to_ENST00000531193,uc001qda.2_5end | |association_with_transcript=0bp_to_ENST00000531193,uc001qda.2_5end | ||
Revision as of 09:33, 6 July 2013
| Short description: | p1@ENST00000531193, p1@uc001qda.2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENST00000531193_5end, CAGE_peak_1_at_uc001qda.2_5end |
| Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
| Association with transcript: | 0bp_to_ENST00000531193, uc001qda.2_5end |
| EntrezGene: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@ENST00000531193p1@uc001qda.2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| larynx | 1.90e-105 | 9 |
| upper respiratory tract | 1.53e-49 | 19 |
| respiratory primordium | 2.59e-24 | 38 |
| endoderm of foregut | 2.59e-24 | 38 |
| segment of respiratory tract | 1.82e-19 | 47 |
| foregut | 6.47e-18 | 87 |
| respiratory tract | 8.24e-17 | 54 |
| spleen | 3.01e-16 | 3 |
| gastrointestinal system mesentery | 3.01e-16 | 3 |
| stomach region | 3.01e-16 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| neuroendocrine tumor | 1.36e-08 | 6 |
| cell type cancer | 1.49e-08 | 143 |
| carcinoma | 5.01e-08 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
