FFCP PHASE1:Hg19::chr10:116335392..116335437,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3983|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=78|TSSclassifier=S|UniProt=|association_with_transcript=-34bp_to_uc009xyo.2_5end|description=CAGE_peak_14_at_ABLIM1_5end|id=chr10:116335392..116335437,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002623;4.98e-07;3|ontology_enrichment_celltype_v019_2=CL:0002623,5.06e-07,3|ontology_enrichment_development_v019=UBERON:0005062;5.52e-11;4!UBERON:0007284;5.52e-11;4!UBERON:0007297;2.45e-10;2!UBERON:0006603;7.74e-08;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;3.63e-11;2|ontology_enrichment_disease_v019_2=DOID:114,3.64e-11,2|ontology_enrichment_uberon=UBERON:0007023!6.14e-63!115;UBERON:0003075!6.28e-10!86;UBERON:0007284!6.28e-10!86;UBERON:0001049!9.86e-10!57;UBERON:0005068!9.86e-10!57;UBERON:0006241!9.86e-10!57;UBERON:0007135!9.86e-10!57;UBERON:0004733!2.08e-09!12;UBERON:0002028!2.08e-09!12;UBERON:0007277!2.08e-09!12;UBERON:0000153!2.73e-09!129;UBERON:0007811!2.73e-09!129;UBERON:0002346!3.33e-09!90;UBERON:0003076!3.57e-09!15;UBERON:0003057!3.57e-09!15;UBERON:0004732!1.40e-08!13;UBERON:0002298!2.19e-08!8;UBERON:0002616!3.21e-08!59;UBERON:0006947!5.69e-08!3;UBERON:0004054!5.69e-08!3;UBERON:0000033!8.42e-08!123;UBERON:0003978!8.77e-08!3;UBERON:0009751!8.77e-08!3;UBERON:0000946!8.77e-08!3;UBERON:0002523!8.77e-08!3;UBERON:0005983!8.77e-08!3;UBERON:0002165!8.77e-08!3;UBERON:0002062!8.77e-08!3;UBERON:0007280!8.77e-08!3;UBERON:0000062!1.32e-07!511;UBERON:0003135!4.04e-07!11;UBERON:0004121!4.15e-07!169;UBERON:0000955!4.63e-07!69;UBERON:0006238!4.63e-07!69;UBERON:0005743!5.17e-07!86;UBERON:0001896!8.38e-07!3;UBERON:0005290!8.38e-07!3;UBERON:0010096!8.38e-07!3;UBERON:0000924!9.27e-07!173;UBERON:0006601!9.27e-07!173|ontology_enrichment_uberon_v019=UBERON:0006947;1.11e-14;3!UBERON:0004054;1.11e-14;3!UBERON:0003978;1.78e-14;3!UBERON:0000946;1.78e-14;3!UBERON:0001044;2.06e-12;6!UBERON:0003293;2.06e-12;6!UBERON:0003294;2.06e-12;6!UBERON:0010047;2.06e-12;6!UBERON:0003408;2.06e-12;6!UBERON:0000167;2.06e-12;6!UBERON:0001041;1.59e-11;14!UBERON:0005904;3.90e-11;4!UBERON:0005090;4.01e-11;2!UBERON:0001630;4.01e-11;2!UBERON:0004921;1.87e-10;33!UBERON:0002133;3.93e-10;2!UBERON:0003127;7.34e-10;2!UBERON:0007023;2.66e-09;114!UBERON:0007100;2.70e-08;25!UBERON:0004175;1.50e-07;21!UBERON:0001723;1.83e-07;3!UBERON:0001033;1.83e-07;3!UBERON:0000165;2.46e-07;28!UBERON:0003135;4.12e-07;11!UBERON:0004151;7.53e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-35,114;UBERON:0006947,7.64e-15,3;UBERON:0004054,7.64e-15,3;UBERON:0003978,1.87e-14,3;UBERON:0009751,1.87e-14,3;UBERON:0000946,1.87e-14,3;UBERON:0002523,1.87e-14,3;UBERON:0005983,1.87e-14,3;UBERON:0002165,1.87e-14,3;UBERON:0002062,1.87e-14,3;UBERON:0007280,1.87e-14,3;UBERON:0001044,1.78e-12,6;UBERON:0003293,1.78e-12,6;UBERON:0003294,1.78e-12,6;UBERON:0010047,1.78e-12,6;UBERON:0000167,1.78e-12,6;UBERON:0005904,2.95e-11,4;UBERON:0000161,3.49e-11,36;UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0003103,2.08e-10,68;UBERON:0002133,4.85e-10,2;UBERON:0003127,5.32e-10,2;UBERON:0000166,1.34e-09,22;UBERON:0007100,1.34e-07,27;UBERON:0003408,1.59e-07,10;UBERON:0004921,1.71e-07,118;UBERON:0001723,1.92e-07,3;UBERON:0001033,1.92e-07,3;UBERON:0010056,1.92e-07,3;UBERON:0003135,3.62e-07,11;UBERON:0000165,4.65e-07,29;UBERON:0000930,4.65e-07,29;UBERON:0004151,8.50e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,2.21027132424918,0,0,0,0,0,0,0,2.26879832964947,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,3.92446318369365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,1.23840590304675,0,0,0,0,0.134802265961354,7.2231988256891,0,0,0,0,2.76209081994573,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0.1386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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_uc009xyo.2_5end | |||
|description=CAGE_peak_14_at_ABLIM1_5end | |||
|id=chr10:116335392..116335437,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,5.06e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.52e-11;4!UBERON:0007284;5.52e-11;4!UBERON:0007297;2.45e-10;2!UBERON:0006603;7.74e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.63e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.64e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.14e-63!115;UBERON:0003075!6.28e-10!86;UBERON:0007284!6.28e-10!86;UBERON:0001049!9.86e-10!57;UBERON:0005068!9.86e-10!57;UBERON:0006241!9.86e-10!57;UBERON:0007135!9.86e-10!57;UBERON:0004733!2.08e-09!12;UBERON:0002028!2.08e-09!12;UBERON:0007277!2.08e-09!12;UBERON:0000153!2.73e-09!129;UBERON:0007811!2.73e-09!129;UBERON:0002346!3.33e-09!90;UBERON:0003076!3.57e-09!15;UBERON:0003057!3.57e-09!15;UBERON:0004732!1.40e-08!13;UBERON:0002298!2.19e-08!8;UBERON:0002616!3.21e-08!59;UBERON:0006947!5.69e-08!3;UBERON:0004054!5.69e-08!3;UBERON:0000033!8.42e-08!123;UBERON:0003978!8.77e-08!3;UBERON:0009751!8.77e-08!3;UBERON:0000946!8.77e-08!3;UBERON:0002523!8.77e-08!3;UBERON:0005983!8.77e-08!3;UBERON:0002165!8.77e-08!3;UBERON:0002062!8.77e-08!3;UBERON:0007280!8.77e-08!3;UBERON:0000062!1.32e-07!511;UBERON:0003135!4.04e-07!11;UBERON:0004121!4.15e-07!169;UBERON:0000955!4.63e-07!69;UBERON:0006238!4.63e-07!69;UBERON:0005743!5.17e-07!86;UBERON:0001896!8.38e-07!3;UBERON:0005290!8.38e-07!3;UBERON:0010096!8.38e-07!3;UBERON:0000924!9.27e-07!173;UBERON:0006601!9.27e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.11e-14;3!UBERON:0004054;1.11e-14;3!UBERON:0003978;1.78e-14;3!UBERON:0000946;1.78e-14;3!UBERON:0001044;2.06e-12;6!UBERON:0003293;2.06e-12;6!UBERON:0003294;2.06e-12;6!UBERON:0010047;2.06e-12;6!UBERON:0003408;2.06e-12;6!UBERON:0000167;2.06e-12;6!UBERON:0001041;1.59e-11;14!UBERON:0005904;3.90e-11;4!UBERON:0005090;4.01e-11;2!UBERON:0001630;4.01e-11;2!UBERON:0004921;1.87e-10;33!UBERON:0002133;3.93e-10;2!UBERON:0003127;7.34e-10;2!UBERON:0007023;2.66e-09;114!UBERON:0007100;2.70e-08;25!UBERON:0004175;1.50e-07;21!UBERON:0001723;1.83e-07;3!UBERON:0001033;1.83e-07;3!UBERON:0000165;2.46e-07;28!UBERON:0003135;4.12e-07;11!UBERON:0004151;7.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.56e-35,114;UBERON:0006947,7.64e-15,3;UBERON:0004054,7.64e-15,3;UBERON:0003978,1.87e-14,3;UBERON:0009751,1.87e-14,3;UBERON:0000946,1.87e-14,3;UBERON:0002523,1.87e-14,3;UBERON:0005983,1.87e-14,3;UBERON:0002165,1.87e-14,3;UBERON:0002062,1.87e-14,3;UBERON:0007280,1.87e-14,3;UBERON:0001044,1.78e-12,6;UBERON:0003293,1.78e-12,6;UBERON:0003294,1.78e-12,6;UBERON:0010047,1.78e-12,6;UBERON:0000167,1.78e-12,6;UBERON:0005904,2.95e-11,4;UBERON:0000161,3.49e-11,36;UBERON:0005090,4.02e-11,2;UBERON:0001630,4.02e-11,2;UBERON:0003103,2.08e-10,68;UBERON:0002133,4.85e-10,2;UBERON:0003127,5.32e-10,2;UBERON:0000166,1.34e-09,22;UBERON:0007100,1.34e-07,27;UBERON:0003408,1.59e-07,10;UBERON:0004921,1.71e-07,118;UBERON:0001723,1.92e-07,3;UBERON:0001033,1.92e-07,3;UBERON:0010056,1.92e-07,3;UBERON:0003135,3.62e-07,11;UBERON:0000165,4.65e-07,29;UBERON:0000930,4.65e-07,29;UBERON:0004151,8.50e-07,3 | |||
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|short_description=p14@ABLIM1 | |||
}} |
Revision as of 11:52, 10 September 2013
Short description: | p14@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_ABLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_uc009xyo.2_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 5.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.56e-35 | 114 |
male genital duct | 7.64e-15 | 3 |
internal male genitalia | 7.64e-15 | 3 |
valve | 1.87e-14 | 3 |
cardiac mesenchyme | 1.87e-14 | 3 |
cardial valve | 1.87e-14 | 3 |
tunica intima | 1.87e-14 | 3 |
heart layer | 1.87e-14 | 3 |
endocardium | 1.87e-14 | 3 |
endocardial cushion | 1.87e-14 | 3 |
presumptive endocardium | 1.87e-14 | 3 |
saliva-secreting gland | 1.78e-12 | 6 |
gland of oral region | 1.78e-12 | 6 |
gland of foregut | 1.78e-12 | 6 |
oral gland | 1.78e-12 | 6 |
oral cavity | 1.78e-12 | 6 |
duct of male reproductive system | 2.95e-11 | 4 |
orifice | 3.49e-11 | 36 |
muscle structure | 4.02e-11 | 2 |
muscle organ | 4.02e-11 | 2 |
compound organ | 2.08e-10 | 68 |
atrioventricular valve | 4.85e-10 | 2 |
open tracheal system trachea | 5.32e-10 | 2 |
oral opening | 1.34e-09 | 22 |
primary circulatory organ | 1.34e-07 | 27 |
gland of gut | 1.59e-07 | 10 |
subdivision of digestive tract | 1.71e-07 | 118 |
tongue | 1.92e-07 | 3 |
gustatory system | 1.92e-07 | 3 |
future tongue | 1.92e-07 | 3 |
male reproductive organ | 3.62e-07 | 11 |
mouth | 4.65e-07 | 29 |
stomodeum | 4.65e-07 | 29 |
cardiac chamber | 8.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.64e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.