FFCP PHASE1:Hg19::chr10:70404938..70404942,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:70404938..70404942,+|id=chr10:70404938..70404942,+|ontology_enrichment_celltype=CL:0000039!1.63e-10!7;CL:0000586!1.63e-10!7;CL:0002322!2.09e-08!5|ontology_enrichment_celltype_v019=CL:0002322;3.14e-45;5!CL:0000540;4.51e-38;6!CL:0000404;4.51e-38;6!CL:0002321;2.30e-15;15!CL:0000148;2.45e-13;10!CL:0000147;1.07e-09;14!CL:0000039;3.73e-09;7!CL:0000586;3.73e-09;7!CL:0002319;1.01e-08;25!CL:0002617;2.15e-08;2!CL:0000710;6.04e-07;20|ontology_enrichment_celltype_v019_2=CL:0002322,8.81e-45,5;CL:0000540,1.91e-38,6;CL:0000031,1.91e-38,6;CL:0000404,1.91e-38,6;CL:0000047,5.89e-29,8;CL:0000148,3.30e-13,10;CL:0000541,3.30e-13,10;CL:0000133,6.51e-11,59;CL:0000147,1.32e-09,14;CL:0000039,4.21e-09,7;CL:0000586,4.21e-09,7;CL:0000221,6.65e-09,72;CL:0002319,8.41e-09,25;CL:0002617,2.31e-08,2;CL:0000710,6.98e-07,20|ontology_enrichment_development_v019=CL:0000031;4.51e-38;6!CL:0000133;1.43e-07;59|ontology_enrichment_disease=DOID:3095!2.58e-09!22;DOID:2994!2.58e-09!22|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.66e-10!82;UBERON:0000073!1.90e-09!94;UBERON:0001016!1.90e-09!94;UBERON:0005743!3.05e-09!86;UBERON:0001049!4.40e-09!57;UBERON:0005068!4.40e-09!57;UBERON:0006241!4.40e-09!57;UBERON:0007135!4.40e-09!57;UBERON:0000955!3.19e-07!69;UBERON:0006238!3.19e-07!69;UBERON:0002780!8.08e-07!41;UBERON:0001890!8.08e-07!41;UBERON:0006240!8.08e-07!41|ontology_enrichment_uberon_v019=UBERON:0000922;4.21e-14;49!UBERON:0000473;4.04e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.50e-08,8|phase1_expression=0,1.07050261945492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.390178042679635,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0.975789649036763,1.06023814657188,1.04574548582567,1.24393266018445,1.00928340350251,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,1.91381625495949,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0.46112780877612,0.807818799687949,0.760531603454056,0,0,0,0,0,0,0.676786981851542,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.520679215005393,0,0,0,0.171986032471617,0,0,0,0,0.176512253383001,0.677942222341597,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0.315132729228895,0,0.26961417541674,0.0984274815147488,0,0.795229689809303,0.544813624446302,1.44677833618517,1.37539436597234,2.07720169014593,0,0,0,0,0.157611414598396,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0,0.691743174681154,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:70404938..70404942,+ | |||
|id=chr10:70404938..70404942,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.63e-10!7;CL:0000586!1.63e-10!7;CL:0002322!2.09e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.14e-45;5!CL:0000540;4.51e-38;6!CL:0000404;4.51e-38;6!CL:0002321;2.30e-15;15!CL:0000148;2.45e-13;10!CL:0000147;1.07e-09;14!CL:0000039;3.73e-09;7!CL:0000586;3.73e-09;7!CL:0002319;1.01e-08;25!CL:0002617;2.15e-08;2!CL:0000710;6.04e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.81e-45,5;CL:0000540,1.91e-38,6;CL:0000031,1.91e-38,6;CL:0000404,1.91e-38,6;CL:0000047,5.89e-29,8;CL:0000148,3.30e-13,10;CL:0000541,3.30e-13,10;CL:0000133,6.51e-11,59;CL:0000147,1.32e-09,14;CL:0000039,4.21e-09,7;CL:0000586,4.21e-09,7;CL:0000221,6.65e-09,72;CL:0002319,8.41e-09,25;CL:0002617,2.31e-08,2;CL:0000710,6.98e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000031;4.51e-38;6!CL:0000133;1.43e-07;59 | |||
|ontology_enrichment_disease=DOID:3095!2.58e-09!22;DOID:2994!2.58e-09!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.66e-10!82;UBERON:0000073!1.90e-09!94;UBERON:0001016!1.90e-09!94;UBERON:0005743!3.05e-09!86;UBERON:0001049!4.40e-09!57;UBERON:0005068!4.40e-09!57;UBERON:0006241!4.40e-09!57;UBERON:0007135!4.40e-09!57;UBERON:0000955!3.19e-07!69;UBERON:0006238!3.19e-07!69;UBERON:0002780!8.08e-07!41;UBERON:0001890!8.08e-07!41;UBERON:0006240!8.08e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.21e-14;49!UBERON:0000473;4.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.50e-08,8 | |||
|phase1_expression=0,1.07050261945492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0.390178042679635,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0.975789649036763,1.06023814657188,1.04574548582567,1.24393266018445,1.00928340350251,0.72995471815166,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,1.91381625495949,0,0,0,0.12269149171914,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.178064071293475,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0,0,0,0,0,0.0711418433484141,0.318852545457645,0,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,0,0,0,0,0.46112780877612,0.807818799687949,0.760531603454056,0,0,0,0,0,0,0.676786981851542,0.19606253431774,0.503464760927528,0.189753732724185,0,0,0,0,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.520679215005393,0,0,0,0.171986032471617,0,0,0,0,0.176512253383001,0.677942222341597,0,0,0.189932387867636,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,0,0.315132729228895,0,0.26961417541674,0.0984274815147488,0,0.795229689809303,0.544813624446302,1.44677833618517,1.37539436597234,2.07720169014593,0,0,0,0,0.157611414598396,0,0,0.537862017998534,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.610131324509816,0.250381861413,0,0.221858103073705,0,0.691743174681154,0,0,0,0,0.468334905806882,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0.107824811396682,0.314531883711793,0.436838552768056,0,0.425149840203366,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0.484426936895553,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0.548257766857182,0,0,0.127762427639595,0.535701835878287,0.336283722218824,0,0,0,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0,0.316027223465453,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0.971421986118279,0,0.397901550322736,0.356760272332706,0,0.329821550236287,0.452888530700021,0,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0.946629373159108,0,0.436350690340377,1.5870805215462,0,0,0,0.252332849670158,0.327796715891087,0,0.509944148709909,0.534434810531121,1.01084389488329,2.50707539292375,0,0,0,0,0,0.952257725854961,0.258355639344024,0.186224142887574,0,0.12729431655633,0.404234377916439,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0.320568492303233 | |||
|short_description=p@chr10:70404938..70404942,+ | |||
}} |
Revision as of 14:05, 10 September 2013
Short description: | p@chr10:70404938..70404942, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:70404938..70404942, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.81e-45 | 5 |
neuron | 1.91e-38 | 6 |
neuroblast | 1.91e-38 | 6 |
electrically signaling cell | 1.91e-38 | 6 |
neuronal stem cell | 5.89e-29 | 8 |
melanocyte | 3.30e-13 | 10 |
melanoblast | 3.30e-13 | 10 |
neurectodermal cell | 6.51e-11 | 59 |
pigment cell | 1.32e-09 | 14 |
germ line cell | 4.21e-09 | 7 |
germ cell | 4.21e-09 | 7 |
ectodermal cell | 6.65e-09 | 72 |
neural cell | 8.41e-09 | 25 |
adipocyte of breast | 2.31e-08 | 2 |
neurecto-epithelial cell | 6.98e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
testis | 4.50e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.