FFCP PHASE1:Hg19::chr11:108743668..108743675,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:108743668..108743675,+|id=chr11:108743668..108743675,+|ontology_enrichment_celltype=CL:0002139!1.06e-18!24;CL:0000115!6.06e-12!35;CL:0000128!2.62e-11!7;CL:0000126!2.62e-11!7;CL:0000127!2.62e-11!7;CL:0002453!2.62e-11!7;CL:0000071!4.08e-11!18;CL:0002546!4.08e-11!18;CL:0002605!1.55e-10!3;CL:0005020!4.05e-10!6;CL:0002138!4.05e-10!6;CL:0005022!4.05e-10!6;CL:0002078!5.97e-09!44;CL:0002602!2.02e-08!2;CL:0002549!4.54e-08!2|ontology_enrichment_celltype_v019=CL:0000319;2.21e-40;1!CL:0002138;2.54e-27;6!CL:0000159;5.69e-21;2!CL:0002602;5.69e-21;2!CL:0000083;2.66e-11;4!CL:0002139;1.25e-07;24|ontology_enrichment_celltype_v019_2=CL:0000319,1.48e-40,1;CL:0005020,2.72e-27,6;CL:0002138,2.72e-27,6;CL:0005022,2.72e-27,6;CL:0000159,4.66e-21,2;CL:0002602,6.96e-21,2;CL:0000083,2.53e-11,4;CL:0002139,1.27e-07,24|ontology_enrichment_development_v019=CL:0005022;2.54e-27;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;2.21e-40;1!DOID:4074;3.44e-21;2!DOID:4905;3.44e-21;2!DOID:3498;3.44e-21;2!DOID:1793;2.66e-11;4!DOID:170;5.73e-08;6|ontology_enrichment_disease_v019_2=DOID:3030,1.48e-40,1;DOID:4074,3.11e-21,2;DOID:4905,3.11e-21,2;DOID:3498,3.11e-21,2;DOID:1793,2.53e-11,4;DOID:170,5.54e-08,6|ontology_enrichment_uberon=UBERON:0002049!6.99e-14!79;UBERON:0007798!6.99e-14!79;UBERON:0001986!4.08e-11!18;UBERON:0004638!4.08e-11!18;UBERON:0004852!4.08e-11!18;UBERON:0004535!1.33e-10!110;UBERON:0001009!3.57e-10!113;UBERON:0000055!5.19e-09!69;UBERON:0000487!7.71e-09!22;UBERON:0009568!2.02e-08!2;UBERON:0002216!2.02e-08!2;UBERON:0002209!2.02e-08!2;UBERON:0002213!2.02e-08!2;UBERON:0004267!2.02e-08!2;UBERON:0006444!2.02e-08!2;UBERON:0001995!2.02e-08!2;UBERON:0004715!2.02e-08!2;UBERON:0001468!2.02e-08!2;UBERON:0001130!2.02e-08!2;UBERON:0001066!2.02e-08!2;UBERON:0003947!4.54e-08!2;UBERON:0005629!4.54e-08!2;UBERON:0005358!4.54e-08!2;UBERON:0001886!4.54e-08!2;UBERON:0004086!4.54e-08!2;UBERON:0005282!4.54e-08!2;UBERON:0005281!4.54e-08!2;UBERON:0006914!1.30e-07!25;UBERON:0001473!1.42e-07!8;UBERON:0004536!1.42e-07!8;UBERON:0006558!1.42e-07!8;UBERON:0002200!1.70e-07!11;UBERON:0006876!1.70e-07!11;UBERON:0005284!9.27e-07!5|ontology_enrichment_uberon_v019=UBERON:0006444;5.69e-21;2!UBERON:0001995;5.69e-21;2!UBERON:0004715;5.69e-21;2!UBERON:0001473;8.54e-21;8!UBERON:0004536;8.54e-21;8!UBERON:0006558;8.54e-21;8!UBERON:0002465;7.21e-17;10!UBERON:0002418;1.83e-14;3!UBERON:0004755;1.83e-14;3!UBERON:0011135;3.22e-09;5!UBERON:0002216;3.22e-09;5!UBERON:0011134;3.22e-09;5!UBERON:0002209;3.22e-09;5!UBERON:0002213;3.22e-09;5!UBERON:0007844;3.22e-09;5!UBERON:0011138;3.22e-09;5!UBERON:0001130;3.22e-09;5!UBERON:0001066;3.22e-09;5!UBERON:0001468;3.22e-09;5!UBERON:0002405;6.92e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0006444,6.96e-21,2;UBERON:0001995,6.96e-21,2;UBERON:0004715,6.96e-21,2;UBERON:0001473,8.98e-21,8;UBERON:0004536,8.98e-21,8;UBERON:0006558,8.98e-21,8;UBERON:0002465,7.51e-17,10;UBERON:0002418,2.09e-14,3;UBERON:0004755,2.09e-14,3;UBERON:0011135,3.49e-09,5;UBERON:0002216,3.49e-09,5;UBERON:0011134,3.49e-09,5;UBERON:0002209,3.49e-09,5;UBERON:0002213,3.49e-09,5;UBERON:0005856,3.49e-09,5;UBERON:0005866,3.49e-09,5;UBERON:0005863,3.49e-09,5;UBERON:0007844,3.49e-09,5;UBERON:0011138,3.49e-09,5;UBERON:0001130,3.49e-09,5;UBERON:0001066,3.49e-09,5;UBERON:0001468,3.49e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.11389717664042,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0,0,0,0.419499436209906,0.275118041940067,0,0,0,1.33888245105868,0,0.760272105718513,0.976248230192678,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0.433099343283221,0.925971025153221,2.47330397904978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:108743668..108743675,+ | |||
|id=chr11:108743668..108743675,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.06e-18!24;CL:0000115!6.06e-12!35;CL:0000128!2.62e-11!7;CL:0000126!2.62e-11!7;CL:0000127!2.62e-11!7;CL:0002453!2.62e-11!7;CL:0000071!4.08e-11!18;CL:0002546!4.08e-11!18;CL:0002605!1.55e-10!3;CL:0005020!4.05e-10!6;CL:0002138!4.05e-10!6;CL:0005022!4.05e-10!6;CL:0002078!5.97e-09!44;CL:0002602!2.02e-08!2;CL:0002549!4.54e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000319;2.21e-40;1!CL:0002138;2.54e-27;6!CL:0000159;5.69e-21;2!CL:0002602;5.69e-21;2!CL:0000083;2.66e-11;4!CL:0002139;1.25e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.48e-40,1;CL:0005020,2.72e-27,6;CL:0002138,2.72e-27,6;CL:0005022,2.72e-27,6;CL:0000159,4.66e-21,2;CL:0002602,6.96e-21,2;CL:0000083,2.53e-11,4;CL:0002139,1.27e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;2.54e-27;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.21e-40;1!DOID:4074;3.44e-21;2!DOID:4905;3.44e-21;2!DOID:3498;3.44e-21;2!DOID:1793;2.66e-11;4!DOID:170;5.73e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.48e-40,1;DOID:4074,3.11e-21,2;DOID:4905,3.11e-21,2;DOID:3498,3.11e-21,2;DOID:1793,2.53e-11,4;DOID:170,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002049!6.99e-14!79;UBERON:0007798!6.99e-14!79;UBERON:0001986!4.08e-11!18;UBERON:0004638!4.08e-11!18;UBERON:0004852!4.08e-11!18;UBERON:0004535!1.33e-10!110;UBERON:0001009!3.57e-10!113;UBERON:0000055!5.19e-09!69;UBERON:0000487!7.71e-09!22;UBERON:0009568!2.02e-08!2;UBERON:0002216!2.02e-08!2;UBERON:0002209!2.02e-08!2;UBERON:0002213!2.02e-08!2;UBERON:0004267!2.02e-08!2;UBERON:0006444!2.02e-08!2;UBERON:0001995!2.02e-08!2;UBERON:0004715!2.02e-08!2;UBERON:0001468!2.02e-08!2;UBERON:0001130!2.02e-08!2;UBERON:0001066!2.02e-08!2;UBERON:0003947!4.54e-08!2;UBERON:0005629!4.54e-08!2;UBERON:0005358!4.54e-08!2;UBERON:0001886!4.54e-08!2;UBERON:0004086!4.54e-08!2;UBERON:0005282!4.54e-08!2;UBERON:0005281!4.54e-08!2;UBERON:0006914!1.30e-07!25;UBERON:0001473!1.42e-07!8;UBERON:0004536!1.42e-07!8;UBERON:0006558!1.42e-07!8;UBERON:0002200!1.70e-07!11;UBERON:0006876!1.70e-07!11;UBERON:0005284!9.27e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;5.69e-21;2!UBERON:0001995;5.69e-21;2!UBERON:0004715;5.69e-21;2!UBERON:0001473;8.54e-21;8!UBERON:0004536;8.54e-21;8!UBERON:0006558;8.54e-21;8!UBERON:0002465;7.21e-17;10!UBERON:0002418;1.83e-14;3!UBERON:0004755;1.83e-14;3!UBERON:0011135;3.22e-09;5!UBERON:0002216;3.22e-09;5!UBERON:0011134;3.22e-09;5!UBERON:0002209;3.22e-09;5!UBERON:0002213;3.22e-09;5!UBERON:0007844;3.22e-09;5!UBERON:0011138;3.22e-09;5!UBERON:0001130;3.22e-09;5!UBERON:0001066;3.22e-09;5!UBERON:0001468;3.22e-09;5!UBERON:0002405;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,6.96e-21,2;UBERON:0001995,6.96e-21,2;UBERON:0004715,6.96e-21,2;UBERON:0001473,8.98e-21,8;UBERON:0004536,8.98e-21,8;UBERON:0006558,8.98e-21,8;UBERON:0002465,7.51e-17,10;UBERON:0002418,2.09e-14,3;UBERON:0004755,2.09e-14,3;UBERON:0011135,3.49e-09,5;UBERON:0002216,3.49e-09,5;UBERON:0011134,3.49e-09,5;UBERON:0002209,3.49e-09,5;UBERON:0002213,3.49e-09,5;UBERON:0005856,3.49e-09,5;UBERON:0005866,3.49e-09,5;UBERON:0005863,3.49e-09,5;UBERON:0007844,3.49e-09,5;UBERON:0011138,3.49e-09,5;UBERON:0001130,3.49e-09,5;UBERON:0001066,3.49e-09,5;UBERON:0001468,3.49e-09,5 | |||
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|short_description=p@chr11:108743668..108743675,+ | |||
}} |
Revision as of 15:35, 10 September 2013
Short description: | p@chr11:108743668..108743675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:108743668..108743675, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.48e-40 | 1 |
lymphangioblast | 2.72e-27 | 6 |
endothelial cell of lymphatic vessel | 2.72e-27 | 6 |
vascular lymphangioblast | 2.72e-27 | 6 |
seromucus secreting cell | 4.66e-21 | 2 |
annulus pulposus cell | 6.96e-21 | 2 |
epithelial cell of pancreas | 2.53e-11 | 4 |
endothelial cell of vascular tree | 1.27e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 6.96e-21 | 2 |
fibrocartilage | 6.96e-21 | 2 |
annulus fibrosus disci intervertebralis | 6.96e-21 | 2 |
lymphatic vessel | 8.98e-21 | 8 |
lymph vasculature | 8.98e-21 | 8 |
lymphatic part of lymphoid system | 8.98e-21 | 8 |
lymphoid system | 7.51e-17 | 10 |
cartilage tissue | 2.09e-14 | 3 |
skeletal tissue | 2.09e-14 | 3 |
intervertebral cartilage | 3.49e-09 | 5 |
symphysis | 3.49e-09 | 5 |
nonsynovial joint | 3.49e-09 | 5 |
fibrous joint | 3.49e-09 | 5 |
cartilaginous joint | 3.49e-09 | 5 |
developing mesenchymal condensation | 3.49e-09 | 5 |
pre-cartilage condensation | 3.49e-09 | 5 |
cartilaginous condensation | 3.49e-09 | 5 |
cartilage element | 3.49e-09 | 5 |
post-cranial axial skeletal system | 3.49e-09 | 5 |
vertebral column | 3.49e-09 | 5 |
intervertebral disk | 3.49e-09 | 5 |
intervertebral joint | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.48e-40 | 1 |
pancreas adenocarcinoma | 3.11e-21 | 2 |
pancreatic carcinoma | 3.11e-21 | 2 |
pancreatic ductal adenocarcinoma | 3.11e-21 | 2 |
pancreatic cancer | 2.53e-11 | 4 |
endocrine gland cancer | 5.54e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.