FFCP PHASE1:Hg19::chr11:111724543..111724555,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C231|description=CAGE_peak_at_chr11:111724543..111724555,-|id=chr11:111724543..111724555,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000077;2.08e-09;19|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-09,19|ontology_enrichment_development_v019=UBERON:0010122;6.30e-21;2|ontology_enrichment_disease=DOID:6193!8.22e-11!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.35e-22!4;UBERON:0002435!1.35e-22!4;UBERON:0000204!1.35e-22!4;UBERON:0010082!1.35e-22!4;UBERON:0005383!4.72e-14!3;UBERON:0005382!4.72e-14!3;UBERON:0009663!3.58e-13!7;UBERON:0001874!3.41e-11!1;UBERON:0001882!4.15e-11!1;UBERON:0005403!4.15e-11!1;UBERON:0000998!4.58e-11!1;UBERON:0006868!4.58e-11!1;UBERON:0002308!2.30e-10!9;UBERON:0002420!2.30e-10!9;UBERON:0000125!2.30e-10!9;UBERON:0007245!2.30e-10!9;UBERON:0010009!2.30e-10!9;UBERON:0010011!2.30e-10!9;UBERON:0000454!2.30e-10!9;UBERON:0002118!1.72e-08!5;UBERON:0004532!1.72e-08!5;UBERON:0001869!4.26e-07!32;UBERON:0002791!6.98e-07!33|ontology_enrichment_uberon_v019=UBERON:0005383;6.39e-53;3!UBERON:0005382;6.39e-53;3!UBERON:0001874;2.70e-40;1!UBERON:0000369;4.94e-40;4!UBERON:0002435;4.94e-40;4!UBERON:0000204;4.94e-40;4!UBERON:0009663;2.02e-23;7!UBERON:0001873;6.30e-21;2!UBERON:0002420;1.76e-18;9!UBERON:0000125;1.76e-18;9!UBERON:0007245;1.76e-18;9!UBERON:0002308;1.76e-18;9!UBERON:0010009;1.76e-18;9!UBERON:0010011;1.76e-18;9!UBERON:0000454;1.76e-18;9|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.39e-53,3;UBERON:0005382,6.39e-53,3;UBERON:0001874,2.21e-40,1;UBERON:0000369,4.94e-40,4;UBERON:0002435,4.94e-40,4;UBERON:0000204,4.94e-40,4;UBERON:0010082,4.94e-40,4;UBERON:0009663,2.02e-23,7;UBERON:0001873,6.96e-21,2;UBERON:0010122,6.96e-21,2;UBERON:0002420,1.76e-18,9;UBERON:0000125,1.76e-18,9;UBERON:0007245,1.76e-18,9;UBERON:0002308,1.76e-18,9;UBERON:0010009,1.76e-18,9;UBERON:0010011,1.76e-18,9;UBERON:0000454,1.76e-18,9|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,0,3.09916272664377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:111724543..111724555,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_at_chr11:111724543..111724555,- | |||
|id=chr11:111724543..111724555,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.08e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.08e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.30e-21;2 | |||
|ontology_enrichment_disease=DOID:6193!8.22e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.35e-22!4;UBERON:0002435!1.35e-22!4;UBERON:0000204!1.35e-22!4;UBERON:0010082!1.35e-22!4;UBERON:0005383!4.72e-14!3;UBERON:0005382!4.72e-14!3;UBERON:0009663!3.58e-13!7;UBERON:0001874!3.41e-11!1;UBERON:0001882!4.15e-11!1;UBERON:0005403!4.15e-11!1;UBERON:0000998!4.58e-11!1;UBERON:0006868!4.58e-11!1;UBERON:0002308!2.30e-10!9;UBERON:0002420!2.30e-10!9;UBERON:0000125!2.30e-10!9;UBERON:0007245!2.30e-10!9;UBERON:0010009!2.30e-10!9;UBERON:0010011!2.30e-10!9;UBERON:0000454!2.30e-10!9;UBERON:0002118!1.72e-08!5;UBERON:0004532!1.72e-08!5;UBERON:0001869!4.26e-07!32;UBERON:0002791!6.98e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;6.39e-53;3!UBERON:0005382;6.39e-53;3!UBERON:0001874;2.70e-40;1!UBERON:0000369;4.94e-40;4!UBERON:0002435;4.94e-40;4!UBERON:0000204;4.94e-40;4!UBERON:0009663;2.02e-23;7!UBERON:0001873;6.30e-21;2!UBERON:0002420;1.76e-18;9!UBERON:0000125;1.76e-18;9!UBERON:0007245;1.76e-18;9!UBERON:0002308;1.76e-18;9!UBERON:0010009;1.76e-18;9!UBERON:0010011;1.76e-18;9!UBERON:0000454;1.76e-18;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,6.39e-53,3;UBERON:0005382,6.39e-53,3;UBERON:0001874,2.21e-40,1;UBERON:0000369,4.94e-40,4;UBERON:0002435,4.94e-40,4;UBERON:0000204,4.94e-40,4;UBERON:0010082,4.94e-40,4;UBERON:0009663,2.02e-23,7;UBERON:0001873,6.96e-21,2;UBERON:0010122,6.96e-21,2;UBERON:0002420,1.76e-18,9;UBERON:0000125,1.76e-18,9;UBERON:0007245,1.76e-18,9;UBERON:0002308,1.76e-18,9;UBERON:0010009,1.76e-18,9;UBERON:0010011,1.76e-18,9;UBERON:0000454,1.76e-18,9 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91871190177462,0,3.09916272664377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:111724543..111724555,- | |||
}} |
Revision as of 15:41, 10 September 2013
Short description: | p@chr11:111724543..111724555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:111724543..111724555, - |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.08e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 6.39e-53 | 3 |
dorsal striatum | 6.39e-53 | 3 |
putamen | 2.21e-40 | 1 |
corpus striatum | 4.94e-40 | 4 |
striatum | 4.94e-40 | 4 |
ventral part of telencephalon | 4.94e-40 | 4 |
future corpus striatum | 4.94e-40 | 4 |
telencephalic nucleus | 2.02e-23 | 7 |
caudate nucleus | 6.96e-21 | 2 |
future caudate nucleus | 6.96e-21 | 2 |
basal ganglion | 1.76e-18 | 9 |
neural nucleus | 1.76e-18 | 9 |
nuclear complex of neuraxis | 1.76e-18 | 9 |
nucleus of brain | 1.76e-18 | 9 |
aggregate regional part of brain | 1.76e-18 | 9 |
collection of basal ganglia | 1.76e-18 | 9 |
cerebral subcortex | 1.76e-18 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.