FFCP PHASE1:Hg19::chr11:119205222..119205247,+: Difference between revisions
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{{FFCP | 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3.8355256605662,78.9539735719854,67.3417769985191,108.825743529693,50.5968111512973,107.545263531694,62.1696076575545,107.828031177699,53.9430434237893,41.4043342849556,55.9869534029676,98.8623490177227,68.6844048596863,84.923608602184,38.2233733672049,128.826990235105,59.0958277882678,58.745552258767,181.559598341304,75.6850354555136,56.3861476758961,25.618263945135,58.1915307089628,62.780322857406,55.2371335829552,76.5161512158159,40.5470002005164,59.483745629819,45.1208336236875,91.4950450101603,43.5984243205998,39.9754376725632,83.9162993183769,78.3318963028996,61.2651519062408,68.7377713594512,101.066255298799,134.62018558172,0,58.2127941423251,78.0598615882623,32.8235884717899,75.6910347051311,114.804114174578,82.6515521953283,66.4569832645003,66.391638382177,41.7507328932392,68.6793224400011,47.0398335755669,42.7641058148602,42.6741613414793,24.9737166990661,54.299031746828,49.8202707366807,44.3894513328848,30.3482802118316,25.9534898140479,62.4464685944977,60.2673754916725,76.4836522090886,70.1447644320903,76.2306445593421,175.163272190041,148.827615731589,45.6044869461486,44.1494807663965,112.949681815457,48.3974121870033,91.7692262679141,67.3629879920741,55.322845192732,34.9210081929326,148.672783045832,171.945831307251,115.446436521156,52.2184733690853,56.6785343951914,91.2462753594601,48.6156915466914,48.9894483024541,54.5365790458609,54.6169294746298,60.0259995585411,88.7190262999955,124.220062067066,46.308148764286,75.2812291828914,91.5603616616843,48.5571627890921,24.536410838643,84.6664534876885,49.5425212920322,107.612153192569,106.239713936171,51.7302394882423,104.24923372196,64.8649048798032,62.6495800801695,52.4012533552944,48.3016628713746,23.5158648180761,50.7457026030584,43.8358377609024,39.458001890104,36.8337536405587,48.1827529445076,89.3816623257917,50.093428283262,48.0855844282886,47.871813688041,57.3158142924161,82.9302948531876,59.4588527166737,47.4718652360236,38.0745305225769,30.818010377562,84.8811004599333,82.4056861113886,44.0714197243781,37.5609056765934,57.2872327976797,45.7553872345104,65.3266108806922,148.245549181218,100.196529490709,108.580615366801,82.8149297504892,75.0880908796225,26.9252055637096,79.7249974949753,61.077630763901,78.2455260056041,47.2626580491504,36.0981155558014,33.264501176553,45.7083708410381,55.3526957294572,38.5483975777278,145.210762041894,47.9263101834582,44.6678987597665,34.8346796635138,32.854396904187,51.6590246621886,41.2402681007889,36.9252995766075,65.2854214260015,78.3378718742431,189.210836641201,66.5604747609809,46.9281884806909,52.0748552219011,61.8482191039922,39.2796496769452,37.0343780207488,34.6213971687492|short_description=p1@RNF26}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14646 | |||
|TSSclassifier=S | |||
|UniProt=Q9BY78 | |||
|association_with_transcript=0bp_to_ENST00000311413,uc001pwh.2_5end | |||
|description=CAGE_peak_1_at_RNF26_5end | |||
|id=chr11:119205222..119205247,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.09e-20!254;CL:0002321!3.52e-11!248;CL:0000220!1.27e-10!246;CL:0000548!2.65e-10!679;CL:0000004!2.65e-10!679;CL:0000255!2.65e-10!679;CL:0000012!1.44e-09!682;CL:0000076!2.58e-07!62;CL:1000497!6.76e-07!18;CL:0002518!6.76e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.28e-07;17!CL:0002518;2.28e-07;17!CL:1000449;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.00e-20,253;CL:0002321,2.96e-11,250;CL:1000497,2.28e-07,17;CL:0002518,2.28e-07,17;CL:1000449,3.42e-07,15;CL:0000076,4.24e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.33e-23!235;DOID:14566!1.57e-22!239;DOID:0050687!1.31e-15!143;DOID:305!5.55e-11!106;DOID:0050686!8.56e-11!137;DOID:8692!1.74e-08!31;DOID:1240!1.57e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.15e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-23,235;DOID:14566,1.57e-22,239;DOID:0050687,1.31e-15,143;DOID:305,5.55e-11,106;DOID:0050686,8.56e-11,137;DOID:8692,1.74e-08,31;DOID:1240,1.57e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009569!8.40e-09!113;UBERON:0005177!2.83e-08!107;UBERON:0002417!3.32e-08!61;UBERON:0000916!3.32e-08!61;UBERON:0002100!5.50e-08!216;UBERON:0005172!8.25e-08!55;UBERON:0005173!8.25e-08!55;UBERON:0006554!1.85e-07!44;UBERON:0001008!5.53e-07!45;UBERON:0002113!7.58e-07!27;UBERON:0003918!7.58e-07!27;UBERON:0005095!7.58e-07!27;UBERON:0007687!7.58e-07!27;UBERON:0000466!8.50e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.68e-08;24!UBERON:0011143;2.68e-08;24!UBERON:0006554;1.30e-07;30!UBERON:0001008;1.30e-07;30!UBERON:0006555;3.38e-07;15!UBERON:0004819;3.38e-07;15!UBERON:0001285;3.38e-07;15!UBERON:0007684;3.38e-07;15!UBERON:0001851;7.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.02e-09,101;UBERON:0009569,5.66e-09,112;UBERON:0006554,7.20e-09,47;UBERON:0002100,8.59e-09,199;UBERON:0002417,2.09e-08,60;UBERON:0000916,2.09e-08,60;UBERON:0001008,2.40e-08,48;UBERON:0005172,5.11e-08,54;UBERON:0005173,5.11e-08,54;UBERON:0004211,3.42e-07,15;UBERON:0009773,3.42e-07,15;UBERON:0001231,3.42e-07,15;UBERON:0001285,3.42e-07,15;UBERON:0007684,3.42e-07,15;UBERON:0004208,3.42e-07,15;UBERON:0002113,3.55e-07,26;UBERON:0003918,3.55e-07,26;UBERON:0011143,3.55e-07,26;UBERON:0005095,3.55e-07,26;UBERON:0007687,3.55e-07,26;UBERON:0001851,7.08e-07,15 | |||
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| |||
|short_description=p1@RNF26 | |||
}} |
Revision as of 16:07, 10 September 2013
Short description: | p1@RNF26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF26_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311413, uc001pwh.2_5end |
EntrezGene: | RNF26 |
HGNC: | 14646 |
UniProt: | Q9BY78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.00e-20 | 253 |
embryonic cell | 2.96e-11 | 250 |
kidney cell | 2.28e-07 | 17 |
kidney epithelial cell | 2.28e-07 | 17 |
epithelial cell of nephron | 3.42e-07 | 15 |
squamous epithelial cell | 4.24e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.02e-09 | 101 |
subdivision of trunk | 5.66e-09 | 112 |
urinary system structure | 7.20e-09 | 47 |
trunk | 8.59e-09 | 199 |
abdominal segment of trunk | 2.09e-08 | 60 |
abdomen | 2.09e-08 | 60 |
renal system | 2.40e-08 | 48 |
abdomen element | 5.11e-08 | 54 |
abdominal segment element | 5.11e-08 | 54 |
nephron epithelium | 3.42e-07 | 15 |
renal tubule | 3.42e-07 | 15 |
nephron tubule | 3.42e-07 | 15 |
nephron | 3.42e-07 | 15 |
uriniferous tubule | 3.42e-07 | 15 |
nephrogenic mesenchyme | 3.42e-07 | 15 |
kidney | 3.55e-07 | 26 |
kidney mesenchyme | 3.55e-07 | 26 |
upper urinary tract | 3.55e-07 | 26 |
kidney rudiment | 3.55e-07 | 26 |
kidney field | 3.55e-07 | 26 |
cortex | 7.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-23 | 235 |
disease of cellular proliferation | 1.57e-22 | 239 |
cell type cancer | 1.31e-15 | 143 |
carcinoma | 5.55e-11 | 106 |
organ system cancer | 8.56e-11 | 137 |
myeloid leukemia | 1.74e-08 | 31 |
leukemia | 1.57e-07 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.