FFCP PHASE1:Hg19::chr11:119455979..119455996,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:119455979..119455996,-|id=chr11:119455979..119455996,-|ontology_enrichment_celltype=CL:0002319!7.72e-11!25;CL:0000128!2.41e-08!7;CL:0000126!2.41e-08!7;CL:0000127!2.41e-08!7;CL:0002453!2.41e-08!7;CL:0000221!3.64e-08!71;CL:0000133!4.74e-08!59;CL:0000095!1.01e-07!17;CL:0000123!1.01e-07!17;CL:0002274!2.05e-07!5;CL:0000457!2.05e-07!5;CL:0002191!2.05e-07!5;CL:0000097!2.05e-07!5;CL:0000831!2.05e-07!5;CL:0002028!2.05e-07!5|ontology_enrichment_celltype_v019=CL:0000097;1.35e-26;5!CL:0000163;1.13e-14;9!CL:1000415;8.69e-11;2!CL:0000039;2.35e-07;7!CL:0000586;2.35e-07;7|ontology_enrichment_celltype_v019_2=CL:0000097,1.11e-26,5;CL:0002028,1.11e-26,5;CL:0000163,1.01e-14,9;CL:1000415,7.88e-11,2;CL:0000039,2.20e-07,7;CL:0000586,2.20e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;6.62e-08;22!DOID:2994;6.62e-08;22|ontology_enrichment_disease_v019_2=DOID:0050687,1.40e-09,143;DOID:14566,2.09e-08,239;DOID:3095,5.62e-08,22;DOID:2994,5.62e-08,22;DOID:162,7.55e-08,235;DOID:305,2.35e-07,106|ontology_enrichment_uberon=UBERON:0000073!2.62e-18!94;UBERON:0001016!2.62e-18!94;UBERON:0005743!8.70e-17!86;UBERON:0001017!1.04e-15!82;UBERON:0002346!3.62e-14!90;UBERON:0003075!7.86e-14!86;UBERON:0007284!7.86e-14!86;UBERON:0000924!3.25e-13!173;UBERON:0006601!3.25e-13!173;UBERON:0004121!8.23e-13!169;UBERON:0001049!1.97e-11!57;UBERON:0005068!1.97e-11!57;UBERON:0006241!1.97e-11!57;UBERON:0007135!1.97e-11!57;UBERON:0000955!2.80e-11!69;UBERON:0006238!2.80e-11!69;UBERON:0000033!6.15e-11!123;UBERON:0003056!8.22e-11!61;UBERON:0000153!9.95e-11!129;UBERON:0007811!9.95e-11!129;UBERON:0002616!9.84e-10!59;UBERON:0001893!5.24e-08!34;UBERON:0002780!5.60e-08!41;UBERON:0001890!5.60e-08!41;UBERON:0006240!5.60e-08!41;UBERON:0002791!1.23e-07!33;UBERON:0003080!1.24e-07!42;UBERON:0002020!2.39e-07!34;UBERON:0003528!2.39e-07!34;UBERON:0001869!5.84e-07!32|ontology_enrichment_uberon_v019=UBERON:0002294;1.41e-17;7!UBERON:0001173;1.41e-17;7!UBERON:0002110;2.57e-15;3!UBERON:0003714;8.69e-11;2!UBERON:0002423;8.21e-09;25!UBERON:0002114;1.09e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.35e-15,3;UBERON:0006242,1.35e-15,3;UBERON:0002294,1.07e-13,9;UBERON:0001173,1.07e-13,9;UBERON:0004912,1.07e-13,9;UBERON:0003714,4.76e-11,2;UBERON:0009497,7.52e-09,25;UBERON:0000015,7.52e-09,25;UBERON:0002423,7.52e-09,25;UBERON:0006235,7.52e-09,25;UBERON:0004161,7.52e-09,25;UBERON:0002114,8.63e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0.408001382488506,0.626909442956176,2.57612388417951,0.958120975510189,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.087834785693126,0.261958150995425,0,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0,0,0,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0,0,0,0.545492241181669,0,0,0.265059536642971,0.348581828608555,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,1.47798971368783,3.08169519046291,9.53709331487551,7.92659743793288,5.55466707076072,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0,0,0.460404944679482,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,2.92278449306521,0,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.48335359146061,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:119455979..119455996,- | |||
|id=chr11:119455979..119455996,- | |||
|ontology_enrichment_celltype=CL:0002319!7.72e-11!25;CL:0000128!2.41e-08!7;CL:0000126!2.41e-08!7;CL:0000127!2.41e-08!7;CL:0002453!2.41e-08!7;CL:0000221!3.64e-08!71;CL:0000133!4.74e-08!59;CL:0000095!1.01e-07!17;CL:0000123!1.01e-07!17;CL:0002274!2.05e-07!5;CL:0000457!2.05e-07!5;CL:0002191!2.05e-07!5;CL:0000097!2.05e-07!5;CL:0000831!2.05e-07!5;CL:0002028!2.05e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.35e-26;5!CL:0000163;1.13e-14;9!CL:1000415;8.69e-11;2!CL:0000039;2.35e-07;7!CL:0000586;2.35e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.11e-26,5;CL:0002028,1.11e-26,5;CL:0000163,1.01e-14,9;CL:1000415,7.88e-11,2;CL:0000039,2.20e-07,7;CL:0000586,2.20e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;6.62e-08;22!DOID:2994;6.62e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.40e-09,143;DOID:14566,2.09e-08,239;DOID:3095,5.62e-08,22;DOID:2994,5.62e-08,22;DOID:162,7.55e-08,235;DOID:305,2.35e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.62e-18!94;UBERON:0001016!2.62e-18!94;UBERON:0005743!8.70e-17!86;UBERON:0001017!1.04e-15!82;UBERON:0002346!3.62e-14!90;UBERON:0003075!7.86e-14!86;UBERON:0007284!7.86e-14!86;UBERON:0000924!3.25e-13!173;UBERON:0006601!3.25e-13!173;UBERON:0004121!8.23e-13!169;UBERON:0001049!1.97e-11!57;UBERON:0005068!1.97e-11!57;UBERON:0006241!1.97e-11!57;UBERON:0007135!1.97e-11!57;UBERON:0000955!2.80e-11!69;UBERON:0006238!2.80e-11!69;UBERON:0000033!6.15e-11!123;UBERON:0003056!8.22e-11!61;UBERON:0000153!9.95e-11!129;UBERON:0007811!9.95e-11!129;UBERON:0002616!9.84e-10!59;UBERON:0001893!5.24e-08!34;UBERON:0002780!5.60e-08!41;UBERON:0001890!5.60e-08!41;UBERON:0006240!5.60e-08!41;UBERON:0002791!1.23e-07!33;UBERON:0003080!1.24e-07!42;UBERON:0002020!2.39e-07!34;UBERON:0003528!2.39e-07!34;UBERON:0001869!5.84e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.41e-17;7!UBERON:0001173;1.41e-17;7!UBERON:0002110;2.57e-15;3!UBERON:0003714;8.69e-11;2!UBERON:0002423;8.21e-09;25!UBERON:0002114;1.09e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,1.35e-15,3;UBERON:0006242,1.35e-15,3;UBERON:0002294,1.07e-13,9;UBERON:0001173,1.07e-13,9;UBERON:0004912,1.07e-13,9;UBERON:0003714,4.76e-11,2;UBERON:0009497,7.52e-09,25;UBERON:0000015,7.52e-09,25;UBERON:0002423,7.52e-09,25;UBERON:0006235,7.52e-09,25;UBERON:0004161,7.52e-09,25;UBERON:0002114,8.63e-08,2 | |||
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| |||
|short_description=p@chr11:119455979..119455996,- | |||
}} |
Revision as of 16:09, 10 September 2013
Short description: | p@chr11:119455979..119455996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:119455979..119455996, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.11e-26 | 5 |
basophil mast progenitor cell | 1.11e-26 | 5 |
endocrine cell | 1.01e-14 | 9 |
epithelial cell of gall bladder | 7.88e-11 | 2 |
germ line cell | 2.20e-07 | 7 |
germ cell | 2.20e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 1.35e-15 | 3 |
gall bladder primordium | 1.35e-15 | 3 |
biliary system | 1.07e-13 | 9 |
biliary tree | 1.07e-13 | 9 |
biliary bud | 1.07e-13 | 9 |
neural tissue | 4.76e-11 | 2 |
epithelium of foregut-midgut junction | 7.52e-09 | 25 |
anatomical boundary | 7.52e-09 | 25 |
hepatobiliary system | 7.52e-09 | 25 |
foregut-midgut junction | 7.52e-09 | 25 |
septum transversum | 7.52e-09 | 25 |
duodenum | 8.63e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.40e-09 | 143 |
disease of cellular proliferation | 2.09e-08 | 239 |
germ cell and embryonal cancer | 5.62e-08 | 22 |
germ cell cancer | 5.62e-08 | 22 |
cancer | 7.55e-08 | 235 |
carcinoma | 2.35e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.