FFCP PHASE1:Hg19::chr11:64085448..64085452,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25824|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9355|TSSclassifier=S|UniProt=P30044,B7ZLJ4,B7ZVW3|association_with_transcript=-107bp_to_ENST00000265462,NM_012094,NM_181651,NM_181652_5end|description=CAGE_peak_3_at_PRDX5_5end|id=chr11:64085448..64085452,+|ontology_enrichment_celltype=CL:0000066!1.34e-08!254|ontology_enrichment_celltype_v019=CL:0001014;7.02e-10;2!CL:0001016;7.02e-10;2!CL:0002202;3.91e-08;9!CL:0002632;3.91e-08;9!CL:0000307;3.01e-07;3|ontology_enrichment_celltype_v019_2=CL:0001014,4.54e-10,2;CL:0001016,4.54e-10,2;CL:0002202,3.72e-08,9;CL:0002632,3.72e-08,9;CL:0000068,3.12e-07,3;CL:0000069,3.12e-07,3;CL:0000307,3.12e-07,3;CL:0000377,3.12e-07,3;CL:0002076,5.65e-07,42|ontology_enrichment_development_v019=CL:0000377;3.01e-07;3|ontology_enrichment_disease=DOID:162!3.02e-28!235;DOID:14566!8.57e-28!239;DOID:0050687!8.93e-26!143;DOID:305!1.68e-17!106;DOID:0050686!6.88e-12!137;DOID:299!1.50e-09!25;DOID:1749!1.20e-08!14|ontology_enrichment_disease_v019=DOID:1749;5.76e-19;14!DOID:3119;1.65e-07;14|ontology_enrichment_disease_v019_2=DOID:1749,3.32e-19,14;DOID:162,1.35e-09,235;DOID:14566,2.94e-09,239;DOID:3119,1.43e-07,14;DOID:0050687,2.08e-07,143;DOID:305,7.40e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0.229240217243854,0.164201178899891,0,1.57345710739562,0,0.464448369948228,1.83884244895785,0.30120591877825,1.10926203050036,0.0774672005803016,0,0.293600439334847,1.10799081706375,0.802177789880567,0.868043482863407,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0,0,0.368277635987565,0.632924774881769,0,0.637812899895131,0.628975936525128,0.22465726229299,0.150176892841506,0.16072558669708,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0,0,0.473447805734733,0,0.334231370655521,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.14828656316206,0,1.04535523804977,0,0,0.34362744548263,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0.604820229674197,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0.351339142772504,0.196468613246569,0.364295288292542,0.370784442784429,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0.74291500265913,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0,0.234817388471643,0.144366447761074,0,0.190254152234598,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.716468181622786,2.03443756959773,0.766765358330422,0,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0.215714200818617,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0,0,0,0,0,0,0.638063562472921,0.4046311234222,0.464845549297286,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0.577332676353072,4.02181365321472,3.26672954583968,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.245040215981032,0,1.15415370381156,0.284567373393656,1.59426272728822,0.199579371432817,0,0.423347165447766,0,0,0,0.156679895773023,0,0.169291777801603,0.642352300414798,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0.16480387422676,4.22250816255987,0,0,0.251932747854276,0.920418142519393,0,0,0.988551862620595,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.787139999965761,0,1.93448862085349,0,0.945550727071745,1.72371686620732,0.291604613383254,1.56262495439963,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25824 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9355 | |||
|TSSclassifier=S | |||
|UniProt=P30044,B7ZLJ4,B7ZVW3 | |||
|association_with_transcript=-107bp_to_ENST00000265462,NM_012094,NM_181651,NM_181652_5end | |||
|description=CAGE_peak_3_at_PRDX5_5end | |||
|id=chr11:64085448..64085452,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.34e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0001014;7.02e-10;2!CL:0001016;7.02e-10;2!CL:0002202;3.91e-08;9!CL:0002632;3.91e-08;9!CL:0000307;3.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,4.54e-10,2;CL:0001016,4.54e-10,2;CL:0002202,3.72e-08,9;CL:0002632,3.72e-08,9;CL:0000068,3.12e-07,3;CL:0000069,3.12e-07,3;CL:0000307,3.12e-07,3;CL:0000377,3.12e-07,3;CL:0002076,5.65e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;3.01e-07;3 | |||
|ontology_enrichment_disease=DOID:162!3.02e-28!235;DOID:14566!8.57e-28!239;DOID:0050687!8.93e-26!143;DOID:305!1.68e-17!106;DOID:0050686!6.88e-12!137;DOID:299!1.50e-09!25;DOID:1749!1.20e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.76e-19;14!DOID:3119;1.65e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.32e-19,14;DOID:162,1.35e-09,235;DOID:14566,2.94e-09,239;DOID:3119,1.43e-07,14;DOID:0050687,2.08e-07,143;DOID:305,7.40e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@PRDX5 | |||
}} |
Revision as of 18:45, 10 September 2013
Short description: | p3@PRDX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRDX5_5end |
Coexpression cluster: | NA |
Association with transcript: | -107bp_to_ENST00000265462, NM_012094, NM_181651, NM_181652_5end |
EntrezGene: | PRDX5 |
HGNC: | 9355 |
UniProt: | P30044B7ZLJ4B7ZVW3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 4.54e-10 | 2 |
immature CD1a-positive Langerhans cell | 4.54e-10 | 2 |
epithelial cell of tracheobronchial tree | 3.72e-08 | 9 |
epithelial cell of lower respiratory tract | 3.72e-08 | 9 |
duct epithelial cell | 3.12e-07 | 3 |
branched duct epithelial cell | 3.12e-07 | 3 |
tracheal epithelial cell | 3.12e-07 | 3 |
tracheoblast | 3.12e-07 | 3 |
endo-epithelial cell | 5.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.32e-19 | 14 |
cancer | 1.35e-09 | 235 |
disease of cellular proliferation | 2.94e-09 | 239 |
gastrointestinal system cancer | 1.43e-07 | 14 |
cell type cancer | 2.08e-07 | 143 |
carcinoma | 7.40e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.