FFCP PHASE1:Hg19::chr11:72928667..72928678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:72928667..72928678,+|id=chr11:72928667..72928678,+|ontology_enrichment_celltype=CL:0002368!7.29e-11!13;CL:0002537!2.78e-08!5;CL:0002621!9.88e-07!3|ontology_enrichment_celltype_v019=CL:0002537;1.08e-23;5!CL:0002621;9.43e-11;3!CL:0000349;5.75e-07;19|ontology_enrichment_celltype_v019_2=CL:0002537,8.09e-24,5;CL:0002621,9.90e-11,3;CL:0000349,5.34e-07,19|ontology_enrichment_development_v019=UBERON:0009143;2.05e-29;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!6.53e-10!14;UBERON:0000158!6.53e-10!14;UBERON:0000305!8.47e-10!7;UBERON:0004871!1.42e-08!8;UBERON:0001004!4.26e-08!72;UBERON:0004119!9.29e-08!169;UBERON:0000925!9.29e-08!169;UBERON:0006595!9.29e-08!169;UBERON:0000065!3.71e-07!53;UBERON:0001949!9.88e-07!3|ontology_enrichment_uberon_v019=UBERON:0002372;2.05e-29;1!UBERON:0001961;2.05e-29;1!UBERON:0001744;2.05e-29;1!UBERON:0001042;2.05e-29;1!UBERON:0001735;2.05e-29;1!UBERON:0000305;3.02e-17;7!UBERON:0006562;1.91e-15;2!UBERON:0005631;2.18e-12;10!UBERON:0000158;2.18e-12;10!UBERON:0001043;9.43e-11;3!UBERON:0001949;9.43e-11;3!UBERON:0000161;6.38e-07;19!UBERON:0000166;6.38e-07;19|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.20e-29,1;UBERON:0001961,4.20e-29,1;UBERON:0001744,4.20e-29,1;UBERON:0001735,4.20e-29,1;UBERON:0000305,2.46e-17,7;UBERON:0004871,2.65e-15,8;UBERON:0001043,8.99e-11,3;UBERON:0009143,8.99e-11,3;UBERON:0001949,9.90e-11,3;UBERON:0005631,3.58e-09,14;UBERON:0000158,3.58e-09,14;UBERON:0004923,2.37e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,0.765676274967505,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09675927041116,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,1.53620382154229,0.894704431569664,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.296964680832639,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0.112131862580613,0.12729431655633,0,0.870866991587845,0.342233301085281,1.0776328482334,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p@chr11:72928667..72928678,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:72928667..72928678,+ | |||
|id=chr11:72928667..72928678,+ | |||
|ontology_enrichment_celltype=CL:0002368!7.29e-11!13;CL:0002537!2.78e-08!5;CL:0002621!9.88e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.08e-23;5!CL:0002621;9.43e-11;3!CL:0000349;5.75e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,8.09e-24,5;CL:0002621,9.90e-11,3;CL:0000349,5.34e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.05e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.53e-10!14;UBERON:0000158!6.53e-10!14;UBERON:0000305!8.47e-10!7;UBERON:0004871!1.42e-08!8;UBERON:0001004!4.26e-08!72;UBERON:0004119!9.29e-08!169;UBERON:0000925!9.29e-08!169;UBERON:0006595!9.29e-08!169;UBERON:0000065!3.71e-07!53;UBERON:0001949!9.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.05e-29;1!UBERON:0001961;2.05e-29;1!UBERON:0001744;2.05e-29;1!UBERON:0001042;2.05e-29;1!UBERON:0001735;2.05e-29;1!UBERON:0000305;3.02e-17;7!UBERON:0006562;1.91e-15;2!UBERON:0005631;2.18e-12;10!UBERON:0000158;2.18e-12;10!UBERON:0001043;9.43e-11;3!UBERON:0001949;9.43e-11;3!UBERON:0000161;6.38e-07;19!UBERON:0000166;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,4.20e-29,1;UBERON:0001961,4.20e-29,1;UBERON:0001744,4.20e-29,1;UBERON:0001735,4.20e-29,1;UBERON:0000305,2.46e-17,7;UBERON:0004871,2.65e-15,8;UBERON:0001043,8.99e-11,3;UBERON:0009143,8.99e-11,3;UBERON:0001949,9.90e-11,3;UBERON:0005631,3.58e-09,14;UBERON:0000158,3.58e-09,14;UBERON:0004923,2.37e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.960950336825531,0.765676274967505,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09675927041116,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,1.53620382154229,0.894704431569664,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.296964680832639,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26085721434945,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0,0.112131862580613,0.12729431655633,0,0.870866991587845,0.342233301085281,1.0776328482334,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr11:72928667..72928678,+ | |||
}} |
Revision as of 19:34, 10 September 2013
Short description: | p@chr11:72928667..72928678, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:72928667..72928678, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 8.09e-24 | 5 |
gingival epithelial cell | 9.90e-11 | 3 |
extraembryonic cell | 5.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
tonsil | 4.20e-29 | 1 |
mucosa-associated lymphoid tissue | 4.20e-29 | 1 |
lymphoid tissue | 4.20e-29 | 1 |
tonsillar ring | 4.20e-29 | 1 |
amnion | 2.46e-17 | 7 |
somatic layer of lateral plate mesoderm | 2.65e-15 | 8 |
esophagus | 8.99e-11 | 3 |
esophageal region | 8.99e-11 | 3 |
gingival epithelium | 9.90e-11 | 3 |
extraembryonic membrane | 3.58e-09 | 14 |
membranous layer | 3.58e-09 | 14 |
organ component layer | 2.37e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.