FFCP PHASE1:Hg19::chr12:12623621..12623624,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:12623621..12623624,+|id=chr12:12623621..12623624,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000623;2.47e-12;3!CL:0000791;7.65e-08;18!CL:0000789;7.65e-08;18!CL:0002419;7.65e-08;18|ontology_enrichment_celltype_v019_2=CL:0000623,2.15e-12,3;CL:0000825,2.15e-12,3;CL:0000791,7.07e-08,18;CL:0000789,7.07e-08,18;CL:0002420,7.07e-08,18;CL:0002419,7.07e-08,18;CL:0000790,7.07e-08,18;CL:0000738,8.66e-07,136|ontology_enrichment_development_v019=CL:0000790;7.65e-08;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001874;1.20e-09;1!UBERON:0002038;1.20e-09;1!UBERON:0009661;1.20e-09;1!UBERON:0002950;1.20e-09;1!UBERON:0001891;1.20e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.31e-10,1;UBERON:0009661,6.31e-10,1;UBERON:0002950,6.31e-10,1;UBERON:0001891,6.31e-10,1;UBERON:0009616,6.31e-10,1;UBERON:0010286,6.31e-10,1;UBERON:0001874,6.88e-10,1|phase1_expression=0,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,1.20538905604795,0.730310090387373,0,0.246242116153576,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0.393364276848904,1.15148819429164,0,0,0,0,0.232401601740905,0.142169232487422,0,1.10799081706375,0.802177789880567,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0.376484679085209,0,0,0.306083892370903,1.28371610830437,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0,0.736555271975129,0.632924774881769,0,0.425208599930087,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.590129310341499,3.14408610199332,2.2616164889946,0.334372990781356,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.541607727530031,0.512365278902701,0.130059347559878,0.328875809207352,0.552700035571697,0,0.14828656316206,0,1.04535523804977,0.339928028092699,0.383220493601921,0,1.01207876807801,0.95569624297229,0.651083453856419,0,0,0.127986611154418,0,0.473554504088034,0,1.41124720257313,3.20928234940209,0.579297615531196,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0.665188192387692,0,0.130979075497713,0,0,0,0,0.398873881556595,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0.24666754841716,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0.448346041655403,0.117434498643765,0.323745888736263,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.368965315629341,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.710783897485092,0,0.301439377059586,1.74306691720059,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0.205476322550383,0,0,0.591092280605782,3.23441362289276,1.28343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.315404830067869,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0,0.620304078368662,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.246381468041427,0.519254429183621,0.464841513839837,0.120859449591622,0,0.368323955743585,0.114814448164607,0.546273504020151,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0.328014645699706,0.325378394664303,0.309123034943167,0,0.165018999841176,0.574265537996172,0,0,0.096670718292122,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.192444225451024,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0.338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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:12623621..12623624,+ | |||
|id=chr12:12623621..12623624,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.47e-12;3!CL:0000791;7.65e-08;18!CL:0000789;7.65e-08;18!CL:0002419;7.65e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.15e-12,3;CL:0000825,2.15e-12,3;CL:0000791,7.07e-08,18;CL:0000789,7.07e-08,18;CL:0002420,7.07e-08,18;CL:0002419,7.07e-08,18;CL:0000790,7.07e-08,18;CL:0000738,8.66e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.65e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.20e-09;1!UBERON:0002038;1.20e-09;1!UBERON:0009661;1.20e-09;1!UBERON:0002950;1.20e-09;1!UBERON:0001891;1.20e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.31e-10,1;UBERON:0009661,6.31e-10,1;UBERON:0002950,6.31e-10,1;UBERON:0001891,6.31e-10,1;UBERON:0009616,6.31e-10,1;UBERON:0010286,6.31e-10,1;UBERON:0001874,6.88e-10,1 | |||
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| |||
|short_description=p@chr12:12623621..12623624,+ | |||
}} |
Revision as of 21:38, 10 September 2013
Short description: | p@chr12:12623621..12623624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:12623621..12623624, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.15e-12 | 3 |
pro-NK cell | 2.15e-12 | 3 |
mature alpha-beta T cell | 7.07e-08 | 18 |
alpha-beta T cell | 7.07e-08 | 18 |
immature T cell | 7.07e-08 | 18 |
mature T cell | 7.07e-08 | 18 |
immature alpha-beta T cell | 7.07e-08 | 18 |
leukocyte | 8.66e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 6.31e-10 | 1 |
midbrain nucleus | 6.31e-10 | 1 |
regional part of midbrain | 6.31e-10 | 1 |
midbrain | 6.31e-10 | 1 |
presumptive midbrain | 6.31e-10 | 1 |
midbrain neural tube | 6.31e-10 | 1 |
putamen | 6.88e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.