FFCP PHASE1:Hg19::chr12:56567551..56567562,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:56567551..56567562,-|id=chr12:56567551..56567562,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;1.60e-14;3!CL:1000428;1.60e-14;3!CL:0002577;1.60e-14;3!CL:0002559;2.97e-09;5|ontology_enrichment_celltype_v019_2=CL:0002577,1.40e-14,3;CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:0002559,3.22e-09,5|ontology_enrichment_development_v019=UBERON:0005754;1.48e-40;1!UBERON:0007297;4.66e-21;2!UBERON:0006215;1.60e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000998;1.48e-40;1!UBERON:0006868;1.48e-40;1!UBERON:0002771;4.66e-21;2!UBERON:0000412;1.60e-14;3!UBERON:0001992;1.60e-14;3!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0001987;3.10e-11;4!UBERON:0005904;3.10e-11;4!UBERON:0002073;2.97e-09;5!UBERON:0000200;6.33e-08;6!UBERON:0002037;6.33e-08;6!UBERON:0001871;5.70e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.30e-40,1;UBERON:0006868,3.30e-40,1;UBERON:0002771,3.11e-21,2;UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0006947,2.09e-14,3;UBERON:0004054,2.09e-14,3;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0005904,3.79e-11,4;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0004175,2.43e-07,25;UBERON:0001871,5.08e-07,6;UBERON:0003124,5.38e-07,7|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0.631719873426831,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.547497700291537,0,0.305653622991805,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0.422510572623884,0,0.209658645508376,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0.276350017785848,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0.805658634218294,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.264818361626438,0.860509862246441,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.336672227908132,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.757301322732344,0.184099797284599,0.484938170456436,0,0.201504196455281,0,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.224170287987055,0.197030760201927,0.862510299438069,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0.391602314925481,0.343143423810856,0,0.215714200818617,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0.308419387605311,0.355123450626254,0,0,0,0,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0,0,0,0,0,0.510281115829547,0.431831832204279,0,0,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:56567551..56567562,- | |||
|id=chr12:56567551..56567562,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;1.60e-14;3!CL:1000428;1.60e-14;3!CL:0002577;1.60e-14;3!CL:0002559;2.97e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.40e-14,3;CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:0002559,3.22e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.48e-40;1!UBERON:0007297;4.66e-21;2!UBERON:0006215;1.60e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.48e-40;1!UBERON:0006868;1.48e-40;1!UBERON:0002771;4.66e-21;2!UBERON:0000412;1.60e-14;3!UBERON:0001992;1.60e-14;3!UBERON:0006947;1.60e-14;3!UBERON:0004054;1.60e-14;3!UBERON:0001987;3.10e-11;4!UBERON:0005904;3.10e-11;4!UBERON:0002073;2.97e-09;5!UBERON:0000200;6.33e-08;6!UBERON:0002037;6.33e-08;6!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.30e-40,1;UBERON:0006868,3.30e-40,1;UBERON:0002771,3.11e-21,2;UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0006947,2.09e-14,3;UBERON:0004054,2.09e-14,3;UBERON:0001987,2.80e-11,4;UBERON:0004340,2.80e-11,4;UBERON:0005904,3.79e-11,4;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0000200,5.54e-08,6;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0004175,2.43e-07,25;UBERON:0001871,5.08e-07,6;UBERON:0003124,5.38e-07,7 | |||
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| |||
|short_description=p@chr12:56567551..56567562,- | |||
}} |
Revision as of 23:31, 10 September 2013
Short description: | p@chr12:56567551..56567562, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:56567551..56567562, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.40e-14 | 3 |
hair follicle dermal papilla cell | 1.83e-14 | 3 |
stem cell of epidermis | 1.83e-14 | 3 |
hair follicle cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.30e-40 | 1 |
seminal fluid secreting gland | 3.30e-40 | 1 |
middle temporal gyrus | 3.11e-21 | 2 |
dermal papilla | 1.83e-14 | 3 |
papillary layer of dermis | 1.83e-14 | 3 |
male genital duct | 2.09e-14 | 3 |
internal male genitalia | 2.09e-14 | 3 |
placenta | 2.80e-11 | 4 |
allantois | 2.80e-11 | 4 |
duct of male reproductive system | 3.79e-11 | 4 |
hair follicle | 3.22e-09 | 5 |
hair follicle placode | 3.22e-09 | 5 |
gyrus | 5.54e-08 | 6 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
internal genitalia | 2.43e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |
chorion | 5.38e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.