FFCP PHASE1:Hg19::chr12:7245152..7245169,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1246|TSSclassifier=S|UniProt=F5H3A3|association_with_transcript=-16bp_to_ENST00000540610_5end|coexpression_cluster_id=C3330|description=CAGE_peak_5_at_C1R_5end|id=chr12:7245152..7245169,-|ontology_enrichment_celltype=CL:0000055!1.19e-17!180;CL:0000057!4.66e-11!75;CL:0000183!1.20e-07!59;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000187!4.07e-07!54|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-10,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.37e-16!365;UBERON:0000481!8.89e-15!347;UBERON:0000477!3.07e-09!286;UBERON:0002385!4.43e-08!63;UBERON:0001015!4.43e-08!63;UBERON:0000383!4.43e-08!63;UBERON:0007023!5.73e-08!115;UBERON:0001134!7.79e-08!61;UBERON:0002036!7.79e-08!61;UBERON:0003082!7.79e-08!61;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.20e-07!659;UBERON:0000119!1.23e-07!312;UBERON:0005256!1.55e-07!143;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004290!9.04e-07!70|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-07;25!UBERON:0000948;5.71e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.16e-08,160;UBERON:0009142,1.16e-08,160;UBERON:0007100,1.24e-07,27;UBERON:0007023,1.81e-07,114;UBERON:0000948,3.12e-07,24;UBERON:0005498,3.12e-07,24;UBERON:0004140,3.12e-07,24;UBERON:0009881,3.12e-07,24;UBERON:0004141,3.12e-07,24;UBERON:0003084,3.12e-07,24;UBERON:0007005,3.12e-07,24;UBERON:0004139,3.12e-07,24;UBERON:0004291,3.12e-07,24;UBERON:0005256,8.80e-07,122|phase1_expression=3.08853244759946,4.71021152560163,5.63817616383885,1.0007329835313,1.34088328328186,2.61701557230111,0,5.68547886084148,7.05201196139564,0.491467873003018,0,0,0,7.79728023648294,4.63956326019082,1.34465029290355,1.20538905604795,2.19093027116212,0.975865597581014,3.81675280038043,1.42800483870977,7.20945859399602,2.0036519099174,0.958120975510189,0.627713197974014,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,3.81680571135301,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0.668462741311041,0,0,0,0.512365278902701,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0,0.535081656179426,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,12.1903433156981,2.68280343881454,3.45228916977532,1.80719576192283,4.51204119572301,7.24232594804119,6.36228757640879,6.8128881842369,2.83604451492204,0.443458794925128,0.87834785693126,2.81605012320082,3.64295288292542,1.85392221392215,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,1.70843440283719,0,0,0.535798369704479,0.898117490504679,1.0135033243499,0,0,0.183201743930407,0,0,0.436094052142534,7.9515512271251,2.40597972162702,1.72131935057184,9.17877186396204,1.41867352879343,3.36406560085384,0,1.72667283892012,6.22422070799533,2.15537075311501,2.28846664358842,1.66493170409425,1.72852777344,0.70296429550139,1.24864030732128,0.570471821544449,2.69007624993242,0.469737994575059,0.323745888736263,0,1.02077085627447,0.737005903870608,4.02970546585485,2.37600571456411,3.70900393917835,3.64064544775211,3.59309070908119,0.505008341862199,0.875829639103749,0.831192346452549,0.877955241761676,1.83892677479412,3.60571341375832,1.13432183160021,2.69084453533293,6.83383644219416,5.93409323246773,4.20127534518163,3.60683852334536,3.86460810068444,4.46680455195816,7.42615861861571,3.41029518064195,2.52433774244115,12.7949359112796,3.87950536365149,4.61512470271599,1.5112814734146,1.3564847384839,0.193260853163297,1.09098448236334,0.286804595389004,0.609868530647977,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,7.71889125831462,0,13.4666699129274,8.66255378003503,1.41968160047813,1.85443159085912,1.44606617930089,2.09558548191549,0.871517776369625,0.71181185733329,1.21348177344148,1.96221465125346,0.769494313892781,0,0,3.2925920906512,7.3504355692771,12.6755034821831,5.89696330006576,4.72631925345123,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0.402115889646523,0.185176890317059,0.651616610620649,0,1.44331342025273,1.27523445472584,2.34817388471643,1.44366447761074,0,0.380508304469197,0,0,0.492434012174795,0,0.445893486866185,0,1.00789276919316,0.141775097242386,0.26867556810854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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |||
|TSSclassifier=S | |||
|UniProt=F5H3A3 | |||
|association_with_transcript=-16bp_to_ENST00000540610_5end | |||
|coexpression_cluster_id=C3330 | |||
|description=CAGE_peak_5_at_C1R_5end | |||
|id=chr12:7245152..7245169,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-17!180;CL:0000057!4.66e-11!75;CL:0000183!1.20e-07!59;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000187!4.07e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.37e-16!365;UBERON:0000481!8.89e-15!347;UBERON:0000477!3.07e-09!286;UBERON:0002385!4.43e-08!63;UBERON:0001015!4.43e-08!63;UBERON:0000383!4.43e-08!63;UBERON:0007023!5.73e-08!115;UBERON:0001134!7.79e-08!61;UBERON:0002036!7.79e-08!61;UBERON:0003082!7.79e-08!61;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.20e-07!659;UBERON:0000119!1.23e-07!312;UBERON:0005256!1.55e-07!143;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004290!9.04e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-07;25!UBERON:0000948;5.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.16e-08,160;UBERON:0009142,1.16e-08,160;UBERON:0007100,1.24e-07,27;UBERON:0007023,1.81e-07,114;UBERON:0000948,3.12e-07,24;UBERON:0005498,3.12e-07,24;UBERON:0004140,3.12e-07,24;UBERON:0009881,3.12e-07,24;UBERON:0004141,3.12e-07,24;UBERON:0003084,3.12e-07,24;UBERON:0007005,3.12e-07,24;UBERON:0004139,3.12e-07,24;UBERON:0004291,3.12e-07,24;UBERON:0005256,8.80e-07,122 | |||
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| |||
|short_description=p5@C1R | |||
}} |
Revision as of 00:23, 11 September 2013
Short description: | p5@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_C1R_5end |
Coexpression cluster: | C3330_Hepatocyte_liver_Mesenchymal_tenocyte_Synoviocyte_Fibroblast_Nucleus |
Association with transcript: | -16bp_to_ENST00000540610_5end |
EntrezGene: | NA |
HGNC: | 1246 |
UniProt: | F5H3A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.16e-08 | 160 |
entire embryonic mesenchyme | 1.16e-08 | 160 |
primary circulatory organ | 1.24e-07 | 27 |
adult organism | 1.81e-07 | 114 |
heart | 3.12e-07 | 24 |
primitive heart tube | 3.12e-07 | 24 |
primary heart field | 3.12e-07 | 24 |
anterior lateral plate mesoderm | 3.12e-07 | 24 |
heart tube | 3.12e-07 | 24 |
heart primordium | 3.12e-07 | 24 |
cardiac mesoderm | 3.12e-07 | 24 |
cardiogenic plate | 3.12e-07 | 24 |
heart rudiment | 3.12e-07 | 24 |
trunk mesenchyme | 8.80e-07 | 122 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.