FFCP PHASE1:Hg19::chr13:67675130..67675157,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:67675130..67675157,+|id=chr13:67675130..67675157,+|ontology_enrichment_celltype=CL:0000066!9.28e-13!254;CL:0002150!4.63e-12!3;CL:0000861!4.63e-12!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-10,253|ontology_enrichment_development_v019=UBERON:0008947;2.86e-28;29|ontology_enrichment_disease=DOID:305!1.95e-18!106;DOID:0050687!6.02e-18!143;DOID:14566!3.12e-12!239;DOID:162!7.89e-12!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.80e-18,106;DOID:0050687,7.31e-17,143;DOID:162,1.38e-14,235;DOID:14566,3.25e-14,239|ontology_enrichment_uberon=UBERON:0001737!3.54e-31!9;UBERON:0001557!8.61e-14!19;UBERON:0000488!5.95e-08!4;UBERON:0008947!1.64e-07!38;UBERON:0003258!1.64e-07!38|ontology_enrichment_uberon_v019=UBERON:0001737;5.54e-76;9!UBERON:0001557;5.54e-76;9!UBERON:0000072;1.20e-19;37!UBERON:0000065;4.52e-16;44!UBERON:0001004;1.38e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.31e-76,9;UBERON:0001557,1.98e-35,19;UBERON:0008947,3.11e-21,38;UBERON:0003258,3.11e-21,38;UBERON:0000072,6.97e-17,47;UBERON:0000065,1.69e-14,54;UBERON:0001041,3.03e-10,87;UBERON:0001004,3.61e-10,74;UBERON:0004921,1.96e-08,118|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,3.19428360107579,3.03452442140583,2.6511213287183,3.30881918197182,3.26819166138609,2.60997681022206,3.50561401216427,3.13954344200554,3.07797725557112,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41932173530541,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0146916532018,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,4.5125531967134,0.195984794828755,0,0,0,6.57943052765779,13.7407916122029,6.81558293541637,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,2.63434171181606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,5.47477881229854,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13193150358254,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0,0,0,0,0,0.245772908753719,0,0,0,0,6.2426754892352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,1.96190514319652,0,4.75040700680967,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0|short_description=p@chr13:67675130..67675157,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:67675130..67675157,+ | |||
|id=chr13:67675130..67675157,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.28e-13!254;CL:0002150!4.63e-12!3;CL:0000861!4.63e-12!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.86e-28;29 | |||
|ontology_enrichment_disease=DOID:305!1.95e-18!106;DOID:0050687!6.02e-18!143;DOID:14566!3.12e-12!239;DOID:162!7.89e-12!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.80e-18,106;DOID:0050687,7.31e-17,143;DOID:162,1.38e-14,235;DOID:14566,3.25e-14,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.54e-31!9;UBERON:0001557!8.61e-14!19;UBERON:0000488!5.95e-08!4;UBERON:0008947!1.64e-07!38;UBERON:0003258!1.64e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.54e-76;9!UBERON:0001557;5.54e-76;9!UBERON:0000072;1.20e-19;37!UBERON:0000065;4.52e-16;44!UBERON:0001004;1.38e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.31e-76,9;UBERON:0001557,1.98e-35,19;UBERON:0008947,3.11e-21,38;UBERON:0003258,3.11e-21,38;UBERON:0000072,6.97e-17,47;UBERON:0000065,1.69e-14,54;UBERON:0001041,3.03e-10,87;UBERON:0001004,3.61e-10,74;UBERON:0004921,1.96e-08,118 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,3.19428360107579,3.03452442140583,2.6511213287183,3.30881918197182,3.26819166138609,2.60997681022206,3.50561401216427,3.13954344200554,3.07797725557112,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41932173530541,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0146916532018,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.651884231532048,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,1.24807205711825,4.5125531967134,0.195984794828755,0,0,0,6.57943052765779,13.7407916122029,6.81558293541637,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,2.63434171181606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,5.47477881229854,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13193150358254,0,0,0,0,0,0,0,0,0,0,2.76344273384959,0,0,0,0,0,0,0.245772908753719,0,0,0,0,6.2426754892352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,1.96190514319652,0,4.75040700680967,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:67675130..67675157,+ | |||
}} |
Revision as of 02:41, 11 September 2013
Short description: | p@chr13:67675130..67675157, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:67675130..67675157, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.31e-76 | 9 |
upper respiratory tract | 1.98e-35 | 19 |
respiratory primordium | 3.11e-21 | 38 |
endoderm of foregut | 3.11e-21 | 38 |
segment of respiratory tract | 6.97e-17 | 47 |
respiratory tract | 1.69e-14 | 54 |
foregut | 3.03e-10 | 87 |
respiratory system | 3.61e-10 | 74 |
subdivision of digestive tract | 1.96e-08 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.80e-18 | 106 |
cell type cancer | 7.31e-17 | 143 |
cancer | 1.38e-14 | 235 |
disease of cellular proliferation | 3.25e-14 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.