FFCP PHASE1:Hg19::chr15:33024232..33024264,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C316|description=CAGE_peak_at_chr15:33024232..33024264,-|id=chr15:33024232..33024264,-|ontology_enrichment_celltype=CL:0000055!1.19e-28!180;CL:0000057!1.65e-26!75;CL:0002620!1.13e-17!23;CL:0000048!1.68e-17!430;CL:0000723!8.65e-17!436;CL:0000034!7.14e-16!444;CL:0002334!2.57e-15!12;CL:0002371!2.72e-12!591;CL:0000680!6.38e-11!57;CL:0000056!6.38e-11!57;CL:0000355!6.38e-11!57;CL:0002320!7.59e-11!365;CL:0000144!1.45e-09!625;CL:0000134!2.22e-09!358;CL:0000187!5.56e-09!54;CL:0000192!1.08e-08!42;CL:0000514!1.08e-08!42;CL:0000183!2.41e-08!59;CL:0000219!1.10e-07!390;CL:0000548!1.83e-07!679;CL:0000004!1.83e-07!679;CL:0000255!1.83e-07!679;CL:0000393!2.12e-07!60;CL:0000211!2.12e-07!60;CL:0000012!2.89e-07!682;CL:0002559!4.40e-07!4|ontology_enrichment_celltype_v019=CL:0002620;1.67e-17;23!CL:0002559;3.84e-16;5!CL:0002334;1.04e-15;12!CL:0000346;5.15e-11;3!CL:1000428;5.15e-11;3!CL:0002580;4.24e-10;3!CL:0000057;3.29e-09;73!CL:0002561;7.64e-07;2!CL:0002617;7.64e-07;2|ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-27,76;CL:0002620,1.88e-17,23;CL:0002559,2.70e-16,5;CL:0002334,1.12e-15,12;CL:0000346,5.10e-11,3;CL:1000428,5.10e-11,3;CL:0000048,3.07e-10,427;CL:0002580,3.83e-10,3;CL:0000723,6.37e-10,433;CL:0000134,1.40e-09,354;CL:0000034,1.64e-09,441;CL:0002320,3.53e-09,361;CL:0000136,4.44e-09,15;CL:0000219,2.19e-08,386;CL:0002561,5.48e-07,2;CL:0002617,8.65e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!6.33e-08!5;DOID:450!6.33e-08!5;DOID:66!6.33e-08!5;DOID:423!6.33e-08!5;DOID:0080000!6.33e-08!5;DOID:11722!6.33e-08!5|ontology_enrichment_disease_v019=DOID:17;6.98e-11;5!DOID:450;6.98e-11;5!DOID:66;6.98e-11;5!DOID:423;6.98e-11;5!DOID:0080000;6.98e-11;5!DOID:11722;6.98e-11;5|ontology_enrichment_disease_v019_2=DOID:17,6.20e-11,5;DOID:450,6.20e-11,5;DOID:66,6.20e-11,5;DOID:423,6.20e-11,5;DOID:0080000,6.20e-11,5;DOID:11722,6.20e-11,5|ontology_enrichment_uberon=UBERON:0000914!1.32e-16!83;UBERON:0002329!1.32e-16!83;UBERON:0003077!1.32e-16!83;UBERON:0003059!1.32e-16!83;UBERON:0007282!1.32e-16!83;UBERON:0009618!1.32e-16!83;UBERON:0007285!1.32e-16!83;UBERON:0004290!1.18e-14!70;UBERON:0002097!3.54e-14!40;UBERON:0002199!4.99e-14!45;UBERON:0002416!4.99e-14!45;UBERON:0000486!1.94e-13!82;UBERON:0003102!3.03e-11!95;UBERON:0005256!4.38e-11!143;UBERON:0002384!6.61e-11!375;UBERON:0001134!1.13e-09!61;UBERON:0002036!1.13e-09!61;UBERON:0003082!1.13e-09!61;UBERON:0002385!4.07e-09!63;UBERON:0001015!4.07e-09!63;UBERON:0000383!4.07e-09!63;UBERON:0000475!6.18e-09!365;UBERON:0002100!7.47e-09!216;UBERON:0003688!9.45e-09!6;UBERON:0002358!9.45e-09!6;UBERON:0003684!9.45e-09!6;UBERON:0001178!9.45e-09!6;UBERON:0002067!2.83e-08!9;UBERON:0004016!2.83e-08!9;UBERON:0010083!2.83e-08!9;UBERON:0002073!4.40e-07!4;UBERON:0005086!4.40e-07!4|ontology_enrichment_uberon_v019=UBERON:0002073;3.84e-16;5!UBERON:0002097;8.26e-14;41!UBERON:0000412;5.15e-11;3!UBERON:0001992;5.15e-11;3!UBERON:0002199;3.19e-10;46!UBERON:0002416;3.19e-10;46!UBERON:0003102;3.11e-09;50!UBERON:0003688;9.26e-09;6!UBERON:0002358;9.26e-09;6!UBERON:0003684;9.26e-09;6!UBERON:0001178;9.26e-09;6!UBERON:0005406;8.37e-08;2!UBERON:0000310;1.83e-07;10!UBERON:0005933;7.64e-07;2!UBERON:0005942;7.64e-07;2!UBERON:0005932;7.64e-07;2!UBERON:0002384;8.57e-07;198!UBERON:0001443;9.41e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.07e-18,41;UBERON:0002073,2.70e-16,5;UBERON:0005086,2.70e-16,5;UBERON:0002199,6.23e-16,46;UBERON:0002416,6.23e-16,46;UBERON:0003102,4.97e-11,99;UBERON:0000412,5.10e-11,3;UBERON:0001992,5.10e-11,3;UBERON:0002384,2.53e-09,371;UBERON:0003688,1.21e-08,6;UBERON:0002358,1.21e-08,6;UBERON:0003684,1.21e-08,6;UBERON:0001178,1.21e-08,6;UBERON:0005406,6.90e-08,2;UBERON:0000310,1.86e-07,10;UBERON:0005933,5.48e-07,2;UBERON:0005942,5.48e-07,2;UBERON:0005932,5.48e-07,2;UBERON:0001443,9.51e-07,11|phase1_expression=1.09007027562334,1.71280419112787,0.704772020479856,1.0007329835313,3.5756887554183,6.10636966870258,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,4.03395087871065,1.80808358407193,0.730310090387373,1.95173119516203,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,0,0.264818361626438,1.43418310374407,1.06400514659507,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.161872944368132,0.421352420106746,0.204154171254893,0.368502951935304,0,1.18800285728205,3.95627086845691,0,0,0,0,0,0.877955241761676,5.21029252858333,1.80285670687916,0,4.12596162084383,3.844032998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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C316 | |||
|description=CAGE_peak_at_chr15:33024232..33024264,- | |||
|id=chr15:33024232..33024264,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-28!180;CL:0000057!1.65e-26!75;CL:0002620!1.13e-17!23;CL:0000048!1.68e-17!430;CL:0000723!8.65e-17!436;CL:0000034!7.14e-16!444;CL:0002334!2.57e-15!12;CL:0002371!2.72e-12!591;CL:0000680!6.38e-11!57;CL:0000056!6.38e-11!57;CL:0000355!6.38e-11!57;CL:0002320!7.59e-11!365;CL:0000144!1.45e-09!625;CL:0000134!2.22e-09!358;CL:0000187!5.56e-09!54;CL:0000192!1.08e-08!42;CL:0000514!1.08e-08!42;CL:0000183!2.41e-08!59;CL:0000219!1.10e-07!390;CL:0000548!1.83e-07!679;CL:0000004!1.83e-07!679;CL:0000255!1.83e-07!679;CL:0000393!2.12e-07!60;CL:0000211!2.12e-07!60;CL:0000012!2.89e-07!682;CL:0002559!4.40e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.67e-17;23!CL:0002559;3.84e-16;5!CL:0002334;1.04e-15;12!CL:0000346;5.15e-11;3!CL:1000428;5.15e-11;3!CL:0002580;4.24e-10;3!CL:0000057;3.29e-09;73!CL:0002561;7.64e-07;2!CL:0002617;7.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.01e-27,76;CL:0002620,1.88e-17,23;CL:0002559,2.70e-16,5;CL:0002334,1.12e-15,12;CL:0000346,5.10e-11,3;CL:1000428,5.10e-11,3;CL:0000048,3.07e-10,427;CL:0002580,3.83e-10,3;CL:0000723,6.37e-10,433;CL:0000134,1.40e-09,354;CL:0000034,1.64e-09,441;CL:0002320,3.53e-09,361;CL:0000136,4.44e-09,15;CL:0000219,2.19e-08,386;CL:0002561,5.48e-07,2;CL:0002617,8.65e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.33e-08!5;DOID:450!6.33e-08!5;DOID:66!6.33e-08!5;DOID:423!6.33e-08!5;DOID:0080000!6.33e-08!5;DOID:11722!6.33e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;6.98e-11;5!DOID:450;6.98e-11;5!DOID:66;6.98e-11;5!DOID:423;6.98e-11;5!DOID:0080000;6.98e-11;5!DOID:11722;6.98e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.20e-11,5;DOID:450,6.20e-11,5;DOID:66,6.20e-11,5;DOID:423,6.20e-11,5;DOID:0080000,6.20e-11,5;DOID:11722,6.20e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.32e-16!83;UBERON:0002329!1.32e-16!83;UBERON:0003077!1.32e-16!83;UBERON:0003059!1.32e-16!83;UBERON:0007282!1.32e-16!83;UBERON:0009618!1.32e-16!83;UBERON:0007285!1.32e-16!83;UBERON:0004290!1.18e-14!70;UBERON:0002097!3.54e-14!40;UBERON:0002199!4.99e-14!45;UBERON:0002416!4.99e-14!45;UBERON:0000486!1.94e-13!82;UBERON:0003102!3.03e-11!95;UBERON:0005256!4.38e-11!143;UBERON:0002384!6.61e-11!375;UBERON:0001134!1.13e-09!61;UBERON:0002036!1.13e-09!61;UBERON:0003082!1.13e-09!61;UBERON:0002385!4.07e-09!63;UBERON:0001015!4.07e-09!63;UBERON:0000383!4.07e-09!63;UBERON:0000475!6.18e-09!365;UBERON:0002100!7.47e-09!216;UBERON:0003688!9.45e-09!6;UBERON:0002358!9.45e-09!6;UBERON:0003684!9.45e-09!6;UBERON:0001178!9.45e-09!6;UBERON:0002067!2.83e-08!9;UBERON:0004016!2.83e-08!9;UBERON:0010083!2.83e-08!9;UBERON:0002073!4.40e-07!4;UBERON:0005086!4.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;3.84e-16;5!UBERON:0002097;8.26e-14;41!UBERON:0000412;5.15e-11;3!UBERON:0001992;5.15e-11;3!UBERON:0002199;3.19e-10;46!UBERON:0002416;3.19e-10;46!UBERON:0003102;3.11e-09;50!UBERON:0003688;9.26e-09;6!UBERON:0002358;9.26e-09;6!UBERON:0003684;9.26e-09;6!UBERON:0001178;9.26e-09;6!UBERON:0005406;8.37e-08;2!UBERON:0000310;1.83e-07;10!UBERON:0005933;7.64e-07;2!UBERON:0005942;7.64e-07;2!UBERON:0005932;7.64e-07;2!UBERON:0002384;8.57e-07;198!UBERON:0001443;9.41e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.07e-18,41;UBERON:0002073,2.70e-16,5;UBERON:0005086,2.70e-16,5;UBERON:0002199,6.23e-16,46;UBERON:0002416,6.23e-16,46;UBERON:0003102,4.97e-11,99;UBERON:0000412,5.10e-11,3;UBERON:0001992,5.10e-11,3;UBERON:0002384,2.53e-09,371;UBERON:0003688,1.21e-08,6;UBERON:0002358,1.21e-08,6;UBERON:0003684,1.21e-08,6;UBERON:0001178,1.21e-08,6;UBERON:0005406,6.90e-08,2;UBERON:0000310,1.86e-07,10;UBERON:0005933,5.48e-07,2;UBERON:0005942,5.48e-07,2;UBERON:0005932,5.48e-07,2;UBERON:0001443,9.51e-07,11 | |||
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|short_description=p@chr15:33024232..33024264,- | |||
}} |
Revision as of 06:36, 11 September 2013
Short description: | p@chr15:33024232..33024264, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:33024232..33024264, - |
Coexpression cluster: | C316_hepatic_Hair_Fibroblast_spindle_Preadipocyte_tenocyte_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.01e-27 | 76 |
skin fibroblast | 1.88e-17 | 23 |
hair follicle cell | 2.70e-16 | 5 |
preadipocyte | 1.12e-15 | 12 |
hair follicle dermal papilla cell | 5.10e-11 | 3 |
stem cell of epidermis | 5.10e-11 | 3 |
multi fate stem cell | 3.07e-10 | 427 |
preadipocyte of the breast | 3.83e-10 | 3 |
somatic stem cell | 6.37e-10 | 433 |
mesenchymal cell | 1.40e-09 | 354 |
stem cell | 1.64e-09 | 441 |
connective tissue cell | 3.53e-09 | 361 |
fat cell | 4.44e-09 | 15 |
motile cell | 2.19e-08 | 386 |
outer root sheath cell | 5.48e-07 | 2 |
adipocyte of breast | 8.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.07e-18 | 41 |
hair follicle | 2.70e-16 | 5 |
hair follicle placode | 2.70e-16 | 5 |
integument | 6.23e-16 | 46 |
integumental system | 6.23e-16 | 46 |
surface structure | 4.97e-11 | 99 |
dermal papilla | 5.10e-11 | 3 |
papillary layer of dermis | 5.10e-11 | 3 |
connective tissue | 2.53e-09 | 371 |
omentum | 1.21e-08 | 6 |
peritoneum | 1.21e-08 | 6 |
abdominal cavity | 1.21e-08 | 6 |
visceral peritoneum | 1.21e-08 | 6 |
perirenal fat | 6.90e-08 | 2 |
breast | 1.86e-07 | 10 |
hair root sheath | 5.48e-07 | 2 |
hair outer root sheath | 5.48e-07 | 2 |
bulb of hair follicle | 5.48e-07 | 2 |
chest | 9.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.20e-11 | 5 |
myotonic disease | 6.20e-11 | 5 |
muscle tissue disease | 6.20e-11 | 5 |
myopathy | 6.20e-11 | 5 |
muscular disease | 6.20e-11 | 5 |
myotonic dystrophy | 6.20e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.