FFCP PHASE1:Hg19::chr15:39884917..39884949,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=N|UniProt=|association_with_transcript=-296bp_to_ENST00000484734_5end|coexpression_cluster_id=C142|description=CAGE_peak_24_at_THBS1_5end|id=chr15:39884917..39884949,+|ontology_enrichment_celltype=CL:0002371!2.36e-19!591;CL:0000055!1.30e-17!180;CL:0000057!1.87e-17!75;CL:0000144!7.45e-17!625;CL:0000548!6.38e-15!679;CL:0000004!6.38e-15!679;CL:0000255!6.38e-15!679;CL:0000012!2.19e-14!682;CL:0000222!1.33e-12!119;CL:0000220!7.21e-12!246;CL:0002321!1.04e-11!248;CL:0002139!2.01e-11!24;CL:0000115!2.52e-11!35;CL:0000003!1.16e-08!722;CL:0002078!1.56e-08!44;CL:0000071!6.67e-08!18;CL:0002546!6.67e-08!18;CL:0000063!7.39e-08!578;CL:0002620!2.04e-07!23;CL:0000213!2.36e-07!57;CL:0000215!2.36e-07!57;CL:0002334!3.68e-07!12;CL:0000192!7.11e-07!42;CL:0000514!7.11e-07!42;CL:0000723!9.95e-07!436|ontology_enrichment_celltype_v019=CL:0002139;5.54e-15;24!CL:0000115;2.60e-14;36!CL:0002620;2.65e-10;23!CL:0000071;1.10e-09;18!CL:0002078;2.95e-08;45!CL:0002334;4.95e-08;12!CL:0002138;2.84e-07;6!CL:1000413;6.79e-07;9|ontology_enrichment_celltype_v019_2=CL:0000115,1.53e-16,36;CL:0000057,8.23e-16,76;CL:0002139,4.31e-15,24;CL:0002078,1.34e-12,45;CL:0000222,1.16e-10,121;CL:0002620,2.83e-10,23;CL:0000213,7.49e-10,58;CL:0000215,7.49e-10,58;CL:0000071,1.19e-09,18;CL:0002546,1.19e-09,18;CL:0002334,8.82e-08,12;CL:0005020,1.81e-07,6;CL:0002138,1.81e-07,6;CL:0005022,1.81e-07,6;CL:0002321,2.49e-07,250;CL:1000413,4.82e-07,9|ontology_enrichment_development_v019=CL:0002546;1.10e-09;18!CL:0005022;2.84e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;3.90e-07;5!DOID:450;3.90e-07;5!DOID:66;3.90e-07;5!DOID:423;3.90e-07;5!DOID:0080000;3.90e-07;5!DOID:11722;3.90e-07;5|ontology_enrichment_disease_v019_2=DOID:17,3.98e-07,5;DOID:450,3.98e-07,5;DOID:66,3.98e-07,5;DOID:423,3.98e-07,5;DOID:0080000,3.98e-07,5;DOID:11722,3.98e-07,5|ontology_enrichment_uberon=UBERON:0002049!1.66e-18!79;UBERON:0007798!1.66e-18!79;UBERON:0000055!7.44e-18!69;UBERON:0004872!1.19e-17!84;UBERON:0001981!1.81e-15!60;UBERON:0007500!1.81e-15!60;UBERON:0004537!1.81e-15!60;UBERON:0006965!1.81e-15!60;UBERON:0004535!1.88e-14!110;UBERON:0001009!3.02e-14!113;UBERON:0001637!6.89e-12!42;UBERON:0003509!6.89e-12!42;UBERON:0004572!6.89e-12!42;UBERON:0003914!1.58e-10!118;UBERON:0003102!6.27e-10!95;UBERON:0000468!3.86e-09!659;UBERON:0004923!7.73e-09!57;UBERON:0000467!9.66e-09!625;UBERON:0000480!1.33e-08!626;UBERON:0004573!2.00e-08!33;UBERON:0004571!2.00e-08!33;UBERON:0001986!6.67e-08!18;UBERON:0004638!6.67e-08!18;UBERON:0004852!6.67e-08!18;UBERON:0002097!9.83e-08!40;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0000490!1.10e-07!138;UBERON:0000487!2.07e-07!22;UBERON:0000947!3.39e-07!21;UBERON:0010191!3.39e-07!21;UBERON:0000914!5.82e-07!83;UBERON:0002329!5.82e-07!83;UBERON:0003077!5.82e-07!83;UBERON:0003059!5.82e-07!83;UBERON:0007282!5.82e-07!83;UBERON:0009618!5.82e-07!83;UBERON:0007285!5.82e-07!83;UBERON:0000486!6.18e-07!82|ontology_enrichment_uberon_v019=UBERON:0001637;9.97e-10;42!UBERON:0003509;9.97e-10;42!UBERON:0004572;9.97e-10;42!UBERON:0004638;1.10e-09;18!UBERON:0001986;1.10e-09;18!UBERON:0004852;1.10e-09;18!UBERON:0002097;1.10e-09;41!UBERON:0000055;1.15e-09;65!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0003688;4.16e-09;6!UBERON:0002358;4.16e-09;6!UBERON:0003684;4.16e-09;6!UBERON:0001178;4.16e-09;6!UBERON:0000487;1.04e-08;22!UBERON:0004573;1.09e-08;33!UBERON:0004571;1.09e-08;33!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0000947;1.07e-07;21!UBERON:0010191;1.07e-07;21!UBERON:0005631;1.13e-07;10!UBERON:0000158;1.13e-07;10!UBERON:0000305;1.44e-07;7!UBERON:0003102;1.67e-07;50!UBERON:0006914;3.59e-07;25!UBERON:0003915;6.79e-07;9!UBERON:0004700;6.79e-07;9!UBERON:0001917;6.79e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.42e-18,68;UBERON:0007500,2.25e-15,59;UBERON:0001981,2.25e-15,59;UBERON:0004537,2.25e-15,59;UBERON:0006965,2.25e-15,59;UBERON:0002049,2.66e-15,78;UBERON:0007798,2.66e-15,78;UBERON:0004872,1.59e-12,83;UBERON:0002097,3.79e-12,41;UBERON:0002199,6.38e-12,46;UBERON:0002416,6.38e-12,46;UBERON:0001637,7.17e-12,42;UBERON:0003509,7.17e-12,42;UBERON:0004572,7.17e-12,42;UBERON:0003102,4.26e-11,99;UBERON:0004535,7.17e-10,109;UBERON:0004638,1.19e-09,18;UBERON:0001986,1.19e-09,18;UBERON:0004852,1.19e-09,18;UBERON:0001009,2.82e-09,112;UBERON:0003688,4.13e-09,6;UBERON:0002358,4.13e-09,6;UBERON:0003684,4.13e-09,6;UBERON:0001178,4.13e-09,6;UBERON:0004923,5.89e-09,66;UBERON:0004871,8.57e-09,8;UBERON:0000487,1.12e-08,22;UBERON:0004573,1.24e-08,33;UBERON:0004571,1.24e-08,33;UBERON:0003914,7.14e-08,117;UBERON:0000947,7.24e-08,21;UBERON:0010191,7.24e-08,21;UBERON:0000305,1.48e-07,7;UBERON:0006914,3.80e-07,25;UBERON:0003915,4.82e-07,9;UBERON:0004700,4.82e-07,9;UBERON:0001917,4.82e-07,9;UBERON:0003081,9.59e-07,203|phase1_expression=12.3541297903979,16.9139413873877,5.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-296bp_to_ENST00000484734_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_24_at_THBS1_5end | |||
|id=chr15:39884917..39884949,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.36e-19!591;CL:0000055!1.30e-17!180;CL:0000057!1.87e-17!75;CL:0000144!7.45e-17!625;CL:0000548!6.38e-15!679;CL:0000004!6.38e-15!679;CL:0000255!6.38e-15!679;CL:0000012!2.19e-14!682;CL:0000222!1.33e-12!119;CL:0000220!7.21e-12!246;CL:0002321!1.04e-11!248;CL:0002139!2.01e-11!24;CL:0000115!2.52e-11!35;CL:0000003!1.16e-08!722;CL:0002078!1.56e-08!44;CL:0000071!6.67e-08!18;CL:0002546!6.67e-08!18;CL:0000063!7.39e-08!578;CL:0002620!2.04e-07!23;CL:0000213!2.36e-07!57;CL:0000215!2.36e-07!57;CL:0002334!3.68e-07!12;CL:0000192!7.11e-07!42;CL:0000514!7.11e-07!42;CL:0000723!9.95e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.54e-15;24!CL:0000115;2.60e-14;36!CL:0002620;2.65e-10;23!CL:0000071;1.10e-09;18!CL:0002078;2.95e-08;45!CL:0002334;4.95e-08;12!CL:0002138;2.84e-07;6!CL:1000413;6.79e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.53e-16,36;CL:0000057,8.23e-16,76;CL:0002139,4.31e-15,24;CL:0002078,1.34e-12,45;CL:0000222,1.16e-10,121;CL:0002620,2.83e-10,23;CL:0000213,7.49e-10,58;CL:0000215,7.49e-10,58;CL:0000071,1.19e-09,18;CL:0002546,1.19e-09,18;CL:0002334,8.82e-08,12;CL:0005020,1.81e-07,6;CL:0002138,1.81e-07,6;CL:0005022,1.81e-07,6;CL:0002321,2.49e-07,250;CL:1000413,4.82e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;1.10e-09;18!CL:0005022;2.84e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.90e-07;5!DOID:450;3.90e-07;5!DOID:66;3.90e-07;5!DOID:423;3.90e-07;5!DOID:0080000;3.90e-07;5!DOID:11722;3.90e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.98e-07,5;DOID:450,3.98e-07,5;DOID:66,3.98e-07,5;DOID:423,3.98e-07,5;DOID:0080000,3.98e-07,5;DOID:11722,3.98e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.66e-18!79;UBERON:0007798!1.66e-18!79;UBERON:0000055!7.44e-18!69;UBERON:0004872!1.19e-17!84;UBERON:0001981!1.81e-15!60;UBERON:0007500!1.81e-15!60;UBERON:0004537!1.81e-15!60;UBERON:0006965!1.81e-15!60;UBERON:0004535!1.88e-14!110;UBERON:0001009!3.02e-14!113;UBERON:0001637!6.89e-12!42;UBERON:0003509!6.89e-12!42;UBERON:0004572!6.89e-12!42;UBERON:0003914!1.58e-10!118;UBERON:0003102!6.27e-10!95;UBERON:0000468!3.86e-09!659;UBERON:0004923!7.73e-09!57;UBERON:0000467!9.66e-09!625;UBERON:0000480!1.33e-08!626;UBERON:0004573!2.00e-08!33;UBERON:0004571!2.00e-08!33;UBERON:0001986!6.67e-08!18;UBERON:0004638!6.67e-08!18;UBERON:0004852!6.67e-08!18;UBERON:0002097!9.83e-08!40;UBERON:0002199!1.07e-07!45;UBERON:0002416!1.07e-07!45;UBERON:0000490!1.10e-07!138;UBERON:0000487!2.07e-07!22;UBERON:0000947!3.39e-07!21;UBERON:0010191!3.39e-07!21;UBERON:0000914!5.82e-07!83;UBERON:0002329!5.82e-07!83;UBERON:0003077!5.82e-07!83;UBERON:0003059!5.82e-07!83;UBERON:0007282!5.82e-07!83;UBERON:0009618!5.82e-07!83;UBERON:0007285!5.82e-07!83;UBERON:0000486!6.18e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.97e-10;42!UBERON:0003509;9.97e-10;42!UBERON:0004572;9.97e-10;42!UBERON:0004638;1.10e-09;18!UBERON:0001986;1.10e-09;18!UBERON:0004852;1.10e-09;18!UBERON:0002097;1.10e-09;41!UBERON:0000055;1.15e-09;65!UBERON:0007500;1.87e-09;56!UBERON:0001981;1.87e-09;56!UBERON:0004537;1.87e-09;56!UBERON:0003688;4.16e-09;6!UBERON:0002358;4.16e-09;6!UBERON:0003684;4.16e-09;6!UBERON:0001178;4.16e-09;6!UBERON:0000487;1.04e-08;22!UBERON:0004573;1.09e-08;33!UBERON:0004571;1.09e-08;33!UBERON:0002199;2.63e-08;46!UBERON:0002416;2.63e-08;46!UBERON:0000947;1.07e-07;21!UBERON:0010191;1.07e-07;21!UBERON:0005631;1.13e-07;10!UBERON:0000158;1.13e-07;10!UBERON:0000305;1.44e-07;7!UBERON:0003102;1.67e-07;50!UBERON:0006914;3.59e-07;25!UBERON:0003915;6.79e-07;9!UBERON:0004700;6.79e-07;9!UBERON:0001917;6.79e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.42e-18,68;UBERON:0007500,2.25e-15,59;UBERON:0001981,2.25e-15,59;UBERON:0004537,2.25e-15,59;UBERON:0006965,2.25e-15,59;UBERON:0002049,2.66e-15,78;UBERON:0007798,2.66e-15,78;UBERON:0004872,1.59e-12,83;UBERON:0002097,3.79e-12,41;UBERON:0002199,6.38e-12,46;UBERON:0002416,6.38e-12,46;UBERON:0001637,7.17e-12,42;UBERON:0003509,7.17e-12,42;UBERON:0004572,7.17e-12,42;UBERON:0003102,4.26e-11,99;UBERON:0004535,7.17e-10,109;UBERON:0004638,1.19e-09,18;UBERON:0001986,1.19e-09,18;UBERON:0004852,1.19e-09,18;UBERON:0001009,2.82e-09,112;UBERON:0003688,4.13e-09,6;UBERON:0002358,4.13e-09,6;UBERON:0003684,4.13e-09,6;UBERON:0001178,4.13e-09,6;UBERON:0004923,5.89e-09,66;UBERON:0004871,8.57e-09,8;UBERON:0000487,1.12e-08,22;UBERON:0004573,1.24e-08,33;UBERON:0004571,1.24e-08,33;UBERON:0003914,7.14e-08,117;UBERON:0000947,7.24e-08,21;UBERON:0010191,7.24e-08,21;UBERON:0000305,1.48e-07,7;UBERON:0006914,3.80e-07,25;UBERON:0003915,4.82e-07,9;UBERON:0004700,4.82e-07,9;UBERON:0001917,4.82e-07,9;UBERON:0003081,9.59e-07,203 | |||
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| |||
|short_description=p24@THBS1 | |||
}} |
Revision as of 06:50, 11 September 2013
Short description: | p24@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -296bp_to_ENST00000484734_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.53e-16 | 36 |
fibroblast | 8.23e-16 | 76 |
endothelial cell of vascular tree | 4.31e-15 | 24 |
meso-epithelial cell | 1.34e-12 | 45 |
mesodermal cell | 1.16e-10 | 121 |
skin fibroblast | 2.83e-10 | 23 |
lining cell | 7.49e-10 | 58 |
barrier cell | 7.49e-10 | 58 |
blood vessel endothelial cell | 1.19e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.19e-09 | 18 |
preadipocyte | 8.82e-08 | 12 |
lymphangioblast | 1.81e-07 | 6 |
endothelial cell of lymphatic vessel | 1.81e-07 | 6 |
vascular lymphangioblast | 1.81e-07 | 6 |
embryonic cell | 2.49e-07 | 250 |
endothelial cell of artery | 4.82e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.98e-07 | 5 |
myotonic disease | 3.98e-07 | 5 |
muscle tissue disease | 3.98e-07 | 5 |
myopathy | 3.98e-07 | 5 |
muscular disease | 3.98e-07 | 5 |
myotonic dystrophy | 3.98e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.