FFCP PHASE1:Hg19::chr16:1657304..1657308,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9742|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29077|TSSclassifier=W|UniProt=Q96RY7|association_with_transcript=-4bp_to_BC035577_5end|description=CAGE_peak_4_at_IFT140_5end|id=chr16:1657304..1657308,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002591;7.36e-18;1!CL:0000632;8.14e-07;3!CL:0000307;8.14e-07;3|ontology_enrichment_celltype_v019_2=CL:0002591,1.44e-17,1;CL:0000632,6.88e-07,3|ontology_enrichment_development_v019=UBERON:0009117;1.20e-07;10!UBERON:0005564;1.20e-07;10!CL:0000377;8.14e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.13e-08!115;UBERON:0000955!2.08e-08!69;UBERON:0006238!2.08e-08!69;UBERON:0000033!6.84e-08!123;UBERON:0002616!7.76e-08!59;UBERON:0000073!2.73e-07!94;UBERON:0001016!2.73e-07!94;UBERON:0000153!2.97e-07!129;UBERON:0007811!2.97e-07!129;UBERON:0005743!3.37e-07!86;UBERON:0003075!4.06e-07!86;UBERON:0007284!4.06e-07!86;UBERON:0001049!5.58e-07!57;UBERON:0005068!5.58e-07!57;UBERON:0006241!5.58e-07!57;UBERON:0007135!5.58e-07!57;UBERON:0001017!7.74e-07!82;UBERON:0000475!8.20e-07!365|ontology_enrichment_uberon_v019=UBERON:0003126;2.03e-10;7!UBERON:0001005;2.03e-10;7!UBERON:0003127;1.33e-09;2!UBERON:0000078;1.33e-09;2!UBERON:0002012;1.33e-09;2!UBERON:0008886;1.33e-09;2!UBERON:0000473;2.44e-09;8!UBERON:0003135;5.00e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.97e-10,7;UBERON:0001005,2.97e-10,7;UBERON:0003127,1.71e-09,2;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0009722,6.35e-07,11;UBERON:0007690,6.35e-07,11|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.247532705920093,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0.263504357079378,1.24430121722827,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0,0.397227542439656,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0,0,0,0.23486899728753,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.302256294682921,0,0,0,0.286804595389004,0.365921118388786,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0,0.370353780634118,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0.285955987316295,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0,1.35359883872224,0.0770153371044148,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0,0,0.117812402345686,0.404364963146632,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0.349934720244983,0.0962221127255121,0.670302275535787,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,1.26675244876796,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29077 | |||
|TSSclassifier=W | |||
|UniProt=Q96RY7 | |||
|association_with_transcript=-4bp_to_BC035577_5end | |||
|description=CAGE_peak_4_at_IFT140_5end | |||
|id=chr16:1657304..1657308,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.36e-18;1!CL:0000632;8.14e-07;3!CL:0000307;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.44e-17,1;CL:0000632,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.20e-07;10!UBERON:0005564;1.20e-07;10!CL:0000377;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-08!115;UBERON:0000955!2.08e-08!69;UBERON:0006238!2.08e-08!69;UBERON:0000033!6.84e-08!123;UBERON:0002616!7.76e-08!59;UBERON:0000073!2.73e-07!94;UBERON:0001016!2.73e-07!94;UBERON:0000153!2.97e-07!129;UBERON:0007811!2.97e-07!129;UBERON:0005743!3.37e-07!86;UBERON:0003075!4.06e-07!86;UBERON:0007284!4.06e-07!86;UBERON:0001049!5.58e-07!57;UBERON:0005068!5.58e-07!57;UBERON:0006241!5.58e-07!57;UBERON:0007135!5.58e-07!57;UBERON:0001017!7.74e-07!82;UBERON:0000475!8.20e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.03e-10;7!UBERON:0001005;2.03e-10;7!UBERON:0003127;1.33e-09;2!UBERON:0000078;1.33e-09;2!UBERON:0002012;1.33e-09;2!UBERON:0008886;1.33e-09;2!UBERON:0000473;2.44e-09;8!UBERON:0003135;5.00e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.97e-10,7;UBERON:0001005,2.97e-10,7;UBERON:0003127,1.71e-09,2;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0009722,6.35e-07,11;UBERON:0007690,6.35e-07,11 | |||
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| |||
|short_description=p4@IFT140 | |||
}} |
Revision as of 09:27, 11 September 2013
Short description: | p4@IFT140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IFT140_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_BC035577_5end |
EntrezGene: | IFT140 |
HGNC: | 29077 |
UniProt: | Q96RY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.44e-17 | 1 |
hepatic stellate cell | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.97e-10 | 7 |
respiratory airway | 2.97e-10 | 7 |
open tracheal system trachea | 1.71e-09 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.86e-09 | 2 |
developing epithelial placode | 1.86e-09 | 2 |
respiratory system arterial blood vessel | 1.86e-09 | 2 |
respiratory system blood vessel | 1.86e-09 | 2 |
respiratory system artery | 1.86e-09 | 2 |
head blood vessel | 1.86e-09 | 2 |
pulmonary artery | 1.86e-09 | 2 |
pulmonary vascular system | 1.86e-09 | 2 |
pharyngeal vasculature | 1.86e-09 | 2 |
truncus arteriosus | 1.86e-09 | 2 |
aortic sac | 1.86e-09 | 2 |
pharyngeal arch artery | 1.86e-09 | 2 |
testis | 1.99e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
entire pharyngeal arch endoderm | 6.35e-07 | 11 |
early pharyngeal endoderm | 6.35e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.