FFCP PHASE1:Hg19::chr16:2079566..2079577,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr16:2079566..2079577,+|id=chr16:2079566..2079577,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.20e-17;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-17,12|ontology_enrichment_development_v019=UBERON:0000358;4.10e-23;1!UBERON:0010226;5.73e-23;1!UBERON:0005062;9.90e-07;4!UBERON:0007284;9.90e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.64e-29!115;UBERON:0003075!2.58e-07!86;UBERON:0007284!2.58e-07!86;UBERON:0002298!3.10e-07!8;UBERON:0001049!3.71e-07!57;UBERON:0005068!3.71e-07!57;UBERON:0006241!3.71e-07!57;UBERON:0007135!3.71e-07!57;UBERON:0005743!4.41e-07!86;UBERON:0002346!8.95e-07!90;UBERON:0000955!9.14e-07!69;UBERON:0006238!9.14e-07!69;UBERON:0001017!9.83e-07!82|ontology_enrichment_uberon_v019=UBERON:0002084;5.73e-23;1!UBERON:0002135;5.73e-23;1!UBERON:0002082;5.73e-23;1!UBERON:0002107;3.82e-19;19!UBERON:0006925;3.82e-19;19!UBERON:0002423;1.15e-14;25!UBERON:0002365;2.72e-12;31!UBERON:0002330;2.72e-12;31!UBERON:0002133;3.43e-12;2!UBERON:0002368;5.83e-10;33!UBERON:0003978;1.46e-08;3!UBERON:0004151;1.46e-08;3!UBERON:0000946;1.46e-08;3!UBERON:0000949;2.08e-08;43|ontology_enrichment_uberon_v019_2=UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0002135,6.40e-23,1;UBERON:0002107,3.82e-19,19;UBERON:0006925,3.82e-19,19;UBERON:0008836,3.82e-19,19;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,6.71e-16,23;UBERON:0007499,1.15e-14,25;UBERON:0009497,1.15e-14,25;UBERON:0000015,1.15e-14,25;UBERON:0002423,1.15e-14,25;UBERON:0006235,1.15e-14,25;UBERON:0004161,1.15e-14,25;UBERON:0009856,4.06e-14,26;UBERON:0002133,3.62e-12,2;UBERON:0002365,6.57e-12,31;UBERON:0002330,6.57e-12,31;UBERON:0002368,1.36e-10,35;UBERON:0004151,1.40e-08,3;UBERON:0003978,1.51e-08,3;UBERON:0009751,1.51e-08,3;UBERON:0000946,1.51e-08,3;UBERON:0002523,1.51e-08,3;UBERON:0005983,1.51e-08,3;UBERON:0002165,1.51e-08,3;UBERON:0002062,1.51e-08,3;UBERON:0007280,1.51e-08,3;UBERON:0000949,2.57e-08,45;UBERON:0003929,5.55e-07,54;UBERON:0005172,5.55e-07,54;UBERON:0005173,5.55e-07,54;UBERON:0003914,8.98e-07,117|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,29.1536580090211,11.7939266001315,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59462474545423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,14.9483278351644,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.286679166302903,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0.201273793591026,0|short_description=p@chr16:2079566..2079577,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr16:2079566..2079577,+ | |||
|id=chr16:2079566..2079577,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.20e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.20e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.10e-23;1!UBERON:0010226;5.73e-23;1!UBERON:0005062;9.90e-07;4!UBERON:0007284;9.90e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.64e-29!115;UBERON:0003075!2.58e-07!86;UBERON:0007284!2.58e-07!86;UBERON:0002298!3.10e-07!8;UBERON:0001049!3.71e-07!57;UBERON:0005068!3.71e-07!57;UBERON:0006241!3.71e-07!57;UBERON:0007135!3.71e-07!57;UBERON:0005743!4.41e-07!86;UBERON:0002346!8.95e-07!90;UBERON:0000955!9.14e-07!69;UBERON:0006238!9.14e-07!69;UBERON:0001017!9.83e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.73e-23;1!UBERON:0002135;5.73e-23;1!UBERON:0002082;5.73e-23;1!UBERON:0002107;3.82e-19;19!UBERON:0006925;3.82e-19;19!UBERON:0002423;1.15e-14;25!UBERON:0002365;2.72e-12;31!UBERON:0002330;2.72e-12;31!UBERON:0002133;3.43e-12;2!UBERON:0002368;5.83e-10;33!UBERON:0003978;1.46e-08;3!UBERON:0004151;1.46e-08;3!UBERON:0000946;1.46e-08;3!UBERON:0000949;2.08e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,5.13e-23,1;UBERON:0002082,5.13e-23,1;UBERON:0010226,5.13e-23,1;UBERON:0002135,6.40e-23,1;UBERON:0002107,3.82e-19,19;UBERON:0006925,3.82e-19,19;UBERON:0008836,3.82e-19,19;UBERON:0008835,1.33e-16,22;UBERON:0003894,1.33e-16,22;UBERON:0009854,6.71e-16,23;UBERON:0007499,1.15e-14,25;UBERON:0009497,1.15e-14,25;UBERON:0000015,1.15e-14,25;UBERON:0002423,1.15e-14,25;UBERON:0006235,1.15e-14,25;UBERON:0004161,1.15e-14,25;UBERON:0009856,4.06e-14,26;UBERON:0002133,3.62e-12,2;UBERON:0002365,6.57e-12,31;UBERON:0002330,6.57e-12,31;UBERON:0002368,1.36e-10,35;UBERON:0004151,1.40e-08,3;UBERON:0003978,1.51e-08,3;UBERON:0009751,1.51e-08,3;UBERON:0000946,1.51e-08,3;UBERON:0002523,1.51e-08,3;UBERON:0005983,1.51e-08,3;UBERON:0002165,1.51e-08,3;UBERON:0002062,1.51e-08,3;UBERON:0007280,1.51e-08,3;UBERON:0000949,2.57e-08,45;UBERON:0003929,5.55e-07,54;UBERON:0005172,5.55e-07,54;UBERON:0005173,5.55e-07,54;UBERON:0003914,8.98e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,29.1536580090211,11.7939266001315,17.7236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59462474545423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,6.87249745670488,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0,0.174919999992391,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.821425535170343,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,1.98627591109629,0,0,0,0,0,0,0,0,14.9483278351644,0,0,0,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.437119121007915,0,0.245148321753905,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.286679166302903,0.157771562193185,0.339957450954573,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:2079566..2079577,+ | |||
}} |
Revision as of 09:36, 11 September 2013
Short description: | p@chr16:2079566..2079577, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:2079566..2079577, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.20e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 5.13e-23 | 1 |
cardiac ventricle | 5.13e-23 | 1 |
future cardiac ventricle | 5.13e-23 | 1 |
mitral valve | 6.40e-23 | 1 |
liver | 3.82e-19 | 19 |
digestive gland | 3.82e-19 | 19 |
liver bud | 3.82e-19 | 19 |
hepatic diverticulum | 1.33e-16 | 22 |
liver primordium | 1.33e-16 | 22 |
digestive tract diverticulum | 6.71e-16 | 23 |
epithelial sac | 1.15e-14 | 25 |
epithelium of foregut-midgut junction | 1.15e-14 | 25 |
anatomical boundary | 1.15e-14 | 25 |
hepatobiliary system | 1.15e-14 | 25 |
foregut-midgut junction | 1.15e-14 | 25 |
septum transversum | 1.15e-14 | 25 |
sac | 4.06e-14 | 26 |
atrioventricular valve | 3.62e-12 | 2 |
exocrine gland | 6.57e-12 | 31 |
exocrine system | 6.57e-12 | 31 |
endocrine gland | 1.36e-10 | 35 |
cardiac chamber | 1.40e-08 | 3 |
valve | 1.51e-08 | 3 |
cardiac mesenchyme | 1.51e-08 | 3 |
cardial valve | 1.51e-08 | 3 |
tunica intima | 1.51e-08 | 3 |
heart layer | 1.51e-08 | 3 |
endocardium | 1.51e-08 | 3 |
endocardial cushion | 1.51e-08 | 3 |
presumptive endocardium | 1.51e-08 | 3 |
endocrine system | 2.57e-08 | 45 |
gut epithelium | 5.55e-07 | 54 |
abdomen element | 5.55e-07 | 54 |
abdominal segment element | 5.55e-07 | 54 |
epithelial tube | 8.98e-07 | 117 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.