FFCP PHASE1:Hg19::chr16:4431846..4431878,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:4431846..4431878,+|id=chr16:4431846..4431878,+|ontology_enrichment_celltype=CL:0000055!4.81e-21!180;CL:0000057!1.37e-18!75;CL:0002620!1.57e-09!23;CL:0002334!4.79e-09!12;CL:0000136!5.20e-07!15|ontology_enrichment_celltype_v019=CL:0002334;4.73e-17;12!CL:0000136;2.72e-08;13!CL:0002615;5.69e-08;3!CL:0002595;9.08e-08;5!CL:0000499;9.17e-08;28!CL:0002622;1.46e-07;3!CL:0002579;1.94e-07;3!CL:0002582;1.94e-07;3!CL:0000135;4.23e-07;3!CL:0000388;4.23e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-17,76;CL:0002334,3.54e-17,12;CL:0000136,5.19e-12,15;CL:0000048,9.30e-12,427;CL:0000723,2.37e-11,433;CL:0000034,7.89e-11,441;CL:0002320,7.33e-10,361;CL:0000134,3.50e-09,354;CL:0002615,2.99e-08,3;CL:0000499,7.62e-08,28;CL:0002595,1.42e-07,5;CL:0002582,1.44e-07,3;CL:0000135,1.65e-07,3;CL:0002579,1.65e-07,3;CL:0000388,1.65e-07,3;CL:0002622,1.77e-07,3;CL:0000219,3.76e-07,386|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!4.14e-10!216;UBERON:0005256!5.69e-10!143;UBERON:0004923!7.48e-10!57;UBERON:0003102!3.34e-09!95;UBERON:0000475!1.30e-08!365;UBERON:0000914!6.98e-08!83;UBERON:0002329!6.98e-08!83;UBERON:0003077!6.98e-08!83;UBERON:0003059!6.98e-08!83;UBERON:0007282!6.98e-08!83;UBERON:0009618!6.98e-08!83;UBERON:0007285!6.98e-08!83;UBERON:0005156!1.61e-07!59;UBERON:0000990!1.61e-07!59;UBERON:0004290!2.51e-07!70;UBERON:0001013!4.89e-07!14;UBERON:0002199!9.78e-07!45;UBERON:0002416!9.78e-07!45|ontology_enrichment_uberon_v019=UBERON:0004457;3.00e-16;9!UBERON:0000042;3.00e-16;9!UBERON:0003688;9.73e-14;6!UBERON:0002358;9.73e-14;6!UBERON:0003684;9.73e-14;6!UBERON:0001178;9.73e-14;6!UBERON:0003834;9.08e-08;5!UBERON:0001533;9.08e-08;5!UBERON:0007846;4.23e-07;3!UBERON:0000043;4.23e-07;3!UBERON:0007845;4.23e-07;3!UBERON:0002384;6.47e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.46e-14,6;UBERON:0002358,4.46e-14,6;UBERON:0003684,4.46e-14,6;UBERON:0001178,4.46e-14,6;UBERON:0004923,4.54e-13,66;UBERON:0004457,5.17e-12,12;UBERON:0000042,5.17e-12,12;UBERON:0002384,2.71e-10,371;UBERON:0003834,1.42e-07,5;UBERON:0001533,1.42e-07,5;UBERON:0007846,1.65e-07,3;UBERON:0000043,1.65e-07,3;UBERON:0007845,1.65e-07,3|phase1_expression=2.54349730978779,1.92690471501885,2.96004248601539,4.00293193412522,1.78784437770915,0.872338524100369,2.53299878168311,5.05375898741465,0.522371256399677,0,0,0,0.527533956456907,0.495065411840187,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,5.06962816362883,0.795285947051099,0,0.0945348171640679,0,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,0.132409180813219,7.17091551872034,1.41867352879343,0.560677600142307,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0,0,0.234321431833797,3.74592092196385,0.570471821544449,2.39117888882882,0.117434498643765,0.485618833104395,0.140450806702248,0,0,1.13658359293342,3.56400857184616,3.95627086845691,0,2.87447256726495,0.168336113954066,0.250237039743928,0,0.877955241761676,1.22595118319608,2.25357088359895,0,0.358779271377724,0.213557388818567,0.211931901159562,1.50045548042201,0.721367704669072,1.03056216018252,0.930584281657949,0.168776332241266,1.26668106709558,0.504867548488229,1.01254888506529,1.77810662500693,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0.121973706129595,0.265059536642971,0.232387885739037,0,0,0,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0,0,0,0,0,0.277765335475589,0.651616610620649,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0.258543431515556,3.57656445851882,0,1.86156681609409,3.12022310734098,0,0,0,1.57275793023962,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.499864955910285,0,0,0,0.718874566474748,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,2.00068208423871,0.542530047399471,0.207970861530807,1.96271887676878,0.946214490203608,0.234282829985426,0.300946099727719,18.1926003244788,8.27784570340039,0,0.184369168541703,1.12948698808508,0.783204629850962,1.02943027143257,0,0,0.106727557803444,2.42502057157008,1.66435439510497,0,1.4886468469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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:4431846..4431878,+ | |||
|id=chr16:4431846..4431878,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.81e-21!180;CL:0000057!1.37e-18!75;CL:0002620!1.57e-09!23;CL:0002334!4.79e-09!12;CL:0000136!5.20e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.73e-17;12!CL:0000136;2.72e-08;13!CL:0002615;5.69e-08;3!CL:0002595;9.08e-08;5!CL:0000499;9.17e-08;28!CL:0002622;1.46e-07;3!CL:0002579;1.94e-07;3!CL:0002582;1.94e-07;3!CL:0000135;4.23e-07;3!CL:0000388;4.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.45e-17,76;CL:0002334,3.54e-17,12;CL:0000136,5.19e-12,15;CL:0000048,9.30e-12,427;CL:0000723,2.37e-11,433;CL:0000034,7.89e-11,441;CL:0002320,7.33e-10,361;CL:0000134,3.50e-09,354;CL:0002615,2.99e-08,3;CL:0000499,7.62e-08,28;CL:0002595,1.42e-07,5;CL:0002582,1.44e-07,3;CL:0000135,1.65e-07,3;CL:0002579,1.65e-07,3;CL:0000388,1.65e-07,3;CL:0002622,1.77e-07,3;CL:0000219,3.76e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.14e-10!216;UBERON:0005256!5.69e-10!143;UBERON:0004923!7.48e-10!57;UBERON:0003102!3.34e-09!95;UBERON:0000475!1.30e-08!365;UBERON:0000914!6.98e-08!83;UBERON:0002329!6.98e-08!83;UBERON:0003077!6.98e-08!83;UBERON:0003059!6.98e-08!83;UBERON:0007282!6.98e-08!83;UBERON:0009618!6.98e-08!83;UBERON:0007285!6.98e-08!83;UBERON:0005156!1.61e-07!59;UBERON:0000990!1.61e-07!59;UBERON:0004290!2.51e-07!70;UBERON:0001013!4.89e-07!14;UBERON:0002199!9.78e-07!45;UBERON:0002416!9.78e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.00e-16;9!UBERON:0000042;3.00e-16;9!UBERON:0003688;9.73e-14;6!UBERON:0002358;9.73e-14;6!UBERON:0003684;9.73e-14;6!UBERON:0001178;9.73e-14;6!UBERON:0003834;9.08e-08;5!UBERON:0001533;9.08e-08;5!UBERON:0007846;4.23e-07;3!UBERON:0000043;4.23e-07;3!UBERON:0007845;4.23e-07;3!UBERON:0002384;6.47e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.46e-14,6;UBERON:0002358,4.46e-14,6;UBERON:0003684,4.46e-14,6;UBERON:0001178,4.46e-14,6;UBERON:0004923,4.54e-13,66;UBERON:0004457,5.17e-12,12;UBERON:0000042,5.17e-12,12;UBERON:0002384,2.71e-10,371;UBERON:0003834,1.42e-07,5;UBERON:0001533,1.42e-07,5;UBERON:0007846,1.65e-07,3;UBERON:0000043,1.65e-07,3;UBERON:0007845,1.65e-07,3 | |||
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| |||
|short_description=p@chr16:4431846..4431878,+ | |||
}} |
Revision as of 10:25, 11 September 2013
Short description: | p@chr16:4431846..4431878, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:4431846..4431878, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.45e-17 | 76 |
preadipocyte | 3.54e-17 | 12 |
fat cell | 5.19e-12 | 15 |
multi fate stem cell | 9.30e-12 | 427 |
somatic stem cell | 2.37e-11 | 433 |
stem cell | 7.89e-11 | 441 |
connective tissue cell | 7.33e-10 | 361 |
mesenchymal cell | 3.50e-09 | 354 |
adipocyte of omentum tissue | 2.99e-08 | 3 |
stromal cell | 7.62e-08 | 28 |
smooth muscle cell of the subclavian artery | 1.42e-07 | 5 |
visceral preadipocyte | 1.44e-07 | 3 |
fibrocyte | 1.65e-07 | 3 |
omentum preadipocyte | 1.65e-07 | 3 |
tendon cell | 1.65e-07 | 3 |
prostate stromal cell | 1.77e-07 | 3 |
motile cell | 3.76e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.46e-14 | 6 |
peritoneum | 4.46e-14 | 6 |
abdominal cavity | 4.46e-14 | 6 |
visceral peritoneum | 4.46e-14 | 6 |
organ component layer | 4.54e-13 | 66 |
cavity lining | 5.17e-12 | 12 |
serous membrane | 5.17e-12 | 12 |
connective tissue | 2.71e-10 | 371 |
thoracic segment blood vessel | 1.42e-07 | 5 |
subclavian artery | 1.42e-07 | 5 |
dense regular connective tissue | 1.65e-07 | 3 |
tendon | 1.65e-07 | 3 |
regular connective tissue | 1.65e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.