FFCP PHASE1:Hg19::chr16:65015971..65016002,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3580|description=CAGE_peak_at_chr16:65015971..65016002,-|id=chr16:65015971..65016002,-|ontology_enrichment_celltype=CL:0000055!1.32e-32!180;CL:0000057!1.15e-23!75;CL:0002620!1.09e-09!23;CL:0000680!2.79e-09!57;CL:0000056!2.79e-09!57;CL:0000355!2.79e-09!57;CL:0002334!4.02e-09!12;CL:0000187!1.03e-08!54;CL:0000183!1.07e-08!59;CL:0000393!2.55e-08!60;CL:0000211!2.55e-08!60|ontology_enrichment_celltype_v019=CL:0002334;7.79e-14;12!CL:0000057;6.05e-11;73!CL:0002620;6.95e-11;23!CL:0002595;4.96e-08;5!CL:1000306;8.89e-07;4!CL:0002547;8.89e-07;4|ontology_enrichment_celltype_v019_2=CL:0000057,9.33e-29,76;CL:0002334,7.42e-14,12;CL:0002620,6.02e-11,23;CL:0000048,1.49e-10,427;CL:0000723,4.55e-10,433;CL:0000034,1.91e-09,441;CL:0002320,4.55e-09,361;CL:0000134,3.21e-08,354;CL:0002595,6.28e-08,5;CL:1000306,4.74e-07,4;CL:0002547,4.74e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!7.70e-07!14|ontology_enrichment_disease_v019=DOID:17;7.07e-08;5!DOID:450;7.07e-08;5!DOID:66;7.07e-08;5!DOID:423;7.07e-08;5!DOID:0080000;7.07e-08;5!DOID:11722;7.07e-08;5|ontology_enrichment_disease_v019_2=DOID:17,7.74e-08,5;DOID:450,7.74e-08,5;DOID:66,7.74e-08,5;DOID:423,7.74e-08,5;DOID:0080000,7.74e-08,5;DOID:11722,7.74e-08,5|ontology_enrichment_uberon=UBERON:0000914!1.35e-09!83;UBERON:0002329!1.35e-09!83;UBERON:0003077!1.35e-09!83;UBERON:0003059!1.35e-09!83;UBERON:0007282!1.35e-09!83;UBERON:0009618!1.35e-09!83;UBERON:0007285!1.35e-09!83;UBERON:0000475!1.10e-08!365;UBERON:0004290!2.55e-08!70;UBERON:0002385!3.56e-08!63;UBERON:0001015!3.56e-08!63;UBERON:0000383!3.56e-08!63;UBERON:0001134!8.23e-08!61;UBERON:0002036!8.23e-08!61;UBERON:0003082!8.23e-08!61;UBERON:0004872!1.26e-07!84;UBERON:0002199!4.37e-07!45;UBERON:0002416!4.37e-07!45;UBERON:0000486!4.64e-07!82|ontology_enrichment_uberon_v019=UBERON:0003834;4.96e-08;5!UBERON:0001533;4.96e-08;5!UBERON:0002384;1.02e-07;198!UBERON:0004797;8.89e-07;4!UBERON:0000415;8.89e-07;4!UBERON:0007240;8.89e-07;4!UBERON:0005742;8.89e-07;4!UBERON:0005734;8.89e-07;4!UBERON:0004664;8.89e-07;4!UBERON:0004663;8.89e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.24e-09,371;UBERON:0002199,5.77e-09,46;UBERON:0002416,5.77e-09,46;UBERON:0002097,3.00e-08,41;UBERON:0003834,6.28e-08,5;UBERON:0001533,6.28e-08,5;UBERON:0000415,4.74e-07,4;UBERON:0007240,4.74e-07,4;UBERON:0005742,4.74e-07,4;UBERON:0005734,4.74e-07,4;UBERON:0004664,4.74e-07,4;UBERON:0004663,4.74e-07,4|phase1_expression=1.81678379270557,7.06531728840244,0.563817616383885,7.00513088471913,1.78784437770915,8.72338524100369,0,0.631719873426831,0.522371256399677,0,0,0,0.263766978228454,0.990130823680373,0.662794751455832,2.01697543935533,3.01347264011988,0.730310090387373,0.487932798790507,0.738726348460727,1.02000345622126,0.940364164434263,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.02420515822182,0.639312809217652,0.722878304769133,2.00535164254356,2.60723734129483,0.795285947051099,0.486634870302636,0.472674085820339,0.221729397462564,0.614843499851882,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,2.09749718104953,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,2.78587125662075,1.58891016975863,8.89193524321323,2.83734705758686,3.92474320099615,1.06748995729705,4.44001587150888,0.311211035399766,0.404132016209064,0.817309515567294,3.32986340818849,7.49028701823999,0,0,0.570471821544449,0.448346041655403,0.352303495931295,0.323745888736263,0.561803226808994,0,1.35117749042945,0.309977343527296,1.18800285728205,3.4617370098998,0,0,0.336672227908132,0.250237039743928,0,0,3.0648779579902,1.95309476578576,1.02088964844019,2.69084453533293,3.20336083227851,2.11931901159562,2.10063767259082,1.44273540933814,2.83404594050192,1.8611685633159,1.35021065793013,1.65642908774038,2.27190396819703,2.39329736469978,1.61646056818812,3.90510551768276,1.10827308050404,1.01736355386293,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,7.71889125831462,0,5.57241513638375,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0,0.343135620597051,0.439001141634502,0,0,0,0.325808305310325,0,1.44331342025273,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0.4400297149257,1.42198887333556,0,0,0.797814349754612,2.08014873822732,0.771622122786426,0,0.266422179016099,0.714889968290738,1.62786481617433,0,0,0,0.791951872933429,5.72734816413214,0,4.89867656792079,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3580 | |||
|description=CAGE_peak_at_chr16:65015971..65016002,- | |||
|id=chr16:65015971..65016002,- | |||
|ontology_enrichment_celltype=CL:0000055!1.32e-32!180;CL:0000057!1.15e-23!75;CL:0002620!1.09e-09!23;CL:0000680!2.79e-09!57;CL:0000056!2.79e-09!57;CL:0000355!2.79e-09!57;CL:0002334!4.02e-09!12;CL:0000187!1.03e-08!54;CL:0000183!1.07e-08!59;CL:0000393!2.55e-08!60;CL:0000211!2.55e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.79e-14;12!CL:0000057;6.05e-11;73!CL:0002620;6.95e-11;23!CL:0002595;4.96e-08;5!CL:1000306;8.89e-07;4!CL:0002547;8.89e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.33e-29,76;CL:0002334,7.42e-14,12;CL:0002620,6.02e-11,23;CL:0000048,1.49e-10,427;CL:0000723,4.55e-10,433;CL:0000034,1.91e-09,441;CL:0002320,4.55e-09,361;CL:0000134,3.21e-08,354;CL:0002595,6.28e-08,5;CL:1000306,4.74e-07,4;CL:0002547,4.74e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;7.07e-08;5!DOID:450;7.07e-08;5!DOID:66;7.07e-08;5!DOID:423;7.07e-08;5!DOID:0080000;7.07e-08;5!DOID:11722;7.07e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.74e-08,5;DOID:450,7.74e-08,5;DOID:66,7.74e-08,5;DOID:423,7.74e-08,5;DOID:0080000,7.74e-08,5;DOID:11722,7.74e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.35e-09!83;UBERON:0002329!1.35e-09!83;UBERON:0003077!1.35e-09!83;UBERON:0003059!1.35e-09!83;UBERON:0007282!1.35e-09!83;UBERON:0009618!1.35e-09!83;UBERON:0007285!1.35e-09!83;UBERON:0000475!1.10e-08!365;UBERON:0004290!2.55e-08!70;UBERON:0002385!3.56e-08!63;UBERON:0001015!3.56e-08!63;UBERON:0000383!3.56e-08!63;UBERON:0001134!8.23e-08!61;UBERON:0002036!8.23e-08!61;UBERON:0003082!8.23e-08!61;UBERON:0004872!1.26e-07!84;UBERON:0002199!4.37e-07!45;UBERON:0002416!4.37e-07!45;UBERON:0000486!4.64e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;4.96e-08;5!UBERON:0001533;4.96e-08;5!UBERON:0002384;1.02e-07;198!UBERON:0004797;8.89e-07;4!UBERON:0000415;8.89e-07;4!UBERON:0007240;8.89e-07;4!UBERON:0005742;8.89e-07;4!UBERON:0005734;8.89e-07;4!UBERON:0004664;8.89e-07;4!UBERON:0004663;8.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.24e-09,371;UBERON:0002199,5.77e-09,46;UBERON:0002416,5.77e-09,46;UBERON:0002097,3.00e-08,41;UBERON:0003834,6.28e-08,5;UBERON:0001533,6.28e-08,5;UBERON:0000415,4.74e-07,4;UBERON:0007240,4.74e-07,4;UBERON:0005742,4.74e-07,4;UBERON:0005734,4.74e-07,4;UBERON:0004664,4.74e-07,4;UBERON:0004663,4.74e-07,4 | |||
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| |||
|short_description=p@chr16:65015971..65016002,- | |||
}} |
Revision as of 11:02, 11 September 2013
Short description: | p@chr16:65015971..65016002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:65015971..65016002, - |
Coexpression cluster: | C3580_Fibroblast_tenocyte_Osteoblast_Adipocyte_Preadipocyte_Mesothelial_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.33e-29 | 76 |
preadipocyte | 7.42e-14 | 12 |
skin fibroblast | 6.02e-11 | 23 |
multi fate stem cell | 1.49e-10 | 427 |
somatic stem cell | 4.55e-10 | 433 |
stem cell | 1.91e-09 | 441 |
connective tissue cell | 4.55e-09 | 361 |
mesenchymal cell | 3.21e-08 | 354 |
smooth muscle cell of the subclavian artery | 6.28e-08 | 5 |
fibroblast of tunica adventitia of artery | 4.74e-07 | 4 |
fibroblast of the aortic adventitia | 4.74e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.24e-09 | 371 |
integument | 5.77e-09 | 46 |
integumental system | 5.77e-09 | 46 |
skin of body | 3.00e-08 | 41 |
thoracic segment blood vessel | 6.28e-08 | 5 |
subclavian artery | 6.28e-08 | 5 |
artery wall | 4.74e-07 | 4 |
tunica adventitia of artery | 4.74e-07 | 4 |
adventitia | 4.74e-07 | 4 |
tunica adventitia of blood vessel | 4.74e-07 | 4 |
aorta tunica adventitia | 4.74e-07 | 4 |
aorta wall | 4.74e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.74e-08 | 5 |
myotonic disease | 7.74e-08 | 5 |
muscle tissue disease | 7.74e-08 | 5 |
myopathy | 7.74e-08 | 5 |
muscular disease | 7.74e-08 | 5 |
myotonic dystrophy | 7.74e-08 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.