FFCP PHASE1:Hg19::chr17:27370232..27370243,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51268|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17804|TSSclassifier=W|UniProt=Q9P0Z9|association_with_transcript=314bp_to_ENST00000323372,NM_016518,uc002hdr.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_4_at_PIPOX_5end|id=chr17:27370232..27370243,+|ontology_enrichment_celltype=CL:0000128!4.19e-08!7;CL:0000126!4.19e-08!7;CL:0000127!4.19e-08!7;CL:0002453!4.19e-08!7;CL:0002319!2.39e-07!25;CL:0002605!2.44e-07!3;CL:0000181!5.39e-07!12;CL:0000417!5.39e-07!12;CL:0000668!5.39e-07!12;CL:0000414!5.39e-07!12;CL:0000412!5.39e-07!12;CL:0000182!5.39e-07!12|ontology_enrichment_celltype_v019=CL:0000182;1.11e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-45,12;CL:0000223,2.50e-09,58|ontology_enrichment_development_v019=UBERON:0004161;9.35e-23;11!UBERON:0009497;2.56e-19;13!UBERON:0001041;1.53e-08;30!UBERON:0003104;3.29e-08;31!CL:0000223;3.78e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.63e-21!82;UBERON:0001049!1.12e-20!57;UBERON:0005068!1.12e-20!57;UBERON:0006241!1.12e-20!57;UBERON:0007135!1.12e-20!57;UBERON:0005743!1.90e-19!86;UBERON:0000073!4.85e-18!94;UBERON:0001016!4.85e-18!94;UBERON:0002020!1.00e-16!34;UBERON:0003528!1.00e-16!34;UBERON:0001893!1.16e-16!34;UBERON:0000955!1.35e-16!69;UBERON:0006238!1.35e-16!69;UBERON:0002616!2.08e-16!59;UBERON:0001869!3.95e-16!32;UBERON:0002791!1.98e-15!33;UBERON:0003075!2.97e-13!86;UBERON:0007284!2.97e-13!86;UBERON:0002780!4.94e-13!41;UBERON:0001890!4.94e-13!41;UBERON:0006240!4.94e-13!41;UBERON:0003080!1.30e-12!42;UBERON:0002346!2.52e-12!90;UBERON:0000956!4.39e-11!25;UBERON:0000203!4.39e-11!25;UBERON:0003076!6.08e-10!15;UBERON:0003057!6.08e-10!15;UBERON:0000033!4.87e-09!123;UBERON:0000025!1.06e-08!194;UBERON:0004121!1.24e-08!169;UBERON:0000369!2.56e-08!4;UBERON:0002435!2.56e-08!4;UBERON:0000204!2.56e-08!4;UBERON:0010082!2.56e-08!4;UBERON:0001950!2.82e-08!20;UBERON:0000153!2.90e-08!129;UBERON:0007811!2.90e-08!129;UBERON:0000924!3.19e-08!173;UBERON:0006601!3.19e-08!173;UBERON:0003056!3.26e-08!61;UBERON:0004733!1.10e-07!12;UBERON:0002028!1.10e-07!12;UBERON:0007277!1.10e-07!12;UBERON:0002308!2.18e-07!9;UBERON:0000125!2.18e-07!9;UBERON:0002619!2.25e-07!22;UBERON:0004732!5.24e-07!13;UBERON:0005383!6.47e-07!3;UBERON:0005382!6.47e-07!3|ontology_enrichment_uberon_v019=UBERON:0002107;3.84e-39;19!UBERON:0006925;3.84e-39;19!UBERON:0002423;1.09e-29;25!UBERON:0002365;2.07e-23;31!UBERON:0002330;2.07e-23;31!UBERON:0002368;9.54e-20;33!UBERON:0000949;5.90e-16;43!UBERON:0005172;3.13e-09;52!UBERON:0005173;3.13e-09;52!UBERON:0002530;2.10e-08;57!UBERON:0002417;7.69e-08;58!UBERON:0000916;7.69e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.74e-39,19;UBERON:0006925,3.74e-39,19;UBERON:0008836,3.74e-39,19;UBERON:0008835,8.77e-34,22;UBERON:0003894,8.77e-34,22;UBERON:0009854,2.65e-32,23;UBERON:0007499,1.07e-29,25;UBERON:0009497,1.07e-29,25;UBERON:0000015,1.07e-29,25;UBERON:0002423,1.07e-29,25;UBERON:0006235,1.07e-29,25;UBERON:0004161,1.07e-29,25;UBERON:0009856,1.52e-28,26;UBERON:0002365,6.82e-24,31;UBERON:0002330,6.82e-24,31;UBERON:0002368,4.00e-21,35;UBERON:0000949,2.39e-16,45;UBERON:0003929,1.49e-13,54;UBERON:0005172,1.49e-13,54;UBERON:0005173,1.49e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.73e-12,60;UBERON:0000916,3.73e-12,60;UBERON:0005911,9.16e-09,82;UBERON:0001041,3.13e-08,87;UBERON:0005177,5.13e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.940364164434263,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.5540919722054,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,21.5483559197112,2.94848165003288,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0.167516265334349,0,0.749007023947182,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,6.4915837338065,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17804 | |||
|TSSclassifier=W | |||
|UniProt=Q9P0Z9 | |||
|association_with_transcript=314bp_to_ENST00000323372,NM_016518,uc002hdr.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_PIPOX_5end | |||
|id=chr17:27370232..27370243,+ | |||
|ontology_enrichment_celltype=CL:0000128!4.19e-08!7;CL:0000126!4.19e-08!7;CL:0000127!4.19e-08!7;CL:0002453!4.19e-08!7;CL:0002319!2.39e-07!25;CL:0002605!2.44e-07!3;CL:0000181!5.39e-07!12;CL:0000417!5.39e-07!12;CL:0000668!5.39e-07!12;CL:0000414!5.39e-07!12;CL:0000412!5.39e-07!12;CL:0000182!5.39e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.11e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.07e-45,12;CL:0000223,2.50e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.35e-23;11!UBERON:0009497;2.56e-19;13!UBERON:0001041;1.53e-08;30!UBERON:0003104;3.29e-08;31!CL:0000223;3.78e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.63e-21!82;UBERON:0001049!1.12e-20!57;UBERON:0005068!1.12e-20!57;UBERON:0006241!1.12e-20!57;UBERON:0007135!1.12e-20!57;UBERON:0005743!1.90e-19!86;UBERON:0000073!4.85e-18!94;UBERON:0001016!4.85e-18!94;UBERON:0002020!1.00e-16!34;UBERON:0003528!1.00e-16!34;UBERON:0001893!1.16e-16!34;UBERON:0000955!1.35e-16!69;UBERON:0006238!1.35e-16!69;UBERON:0002616!2.08e-16!59;UBERON:0001869!3.95e-16!32;UBERON:0002791!1.98e-15!33;UBERON:0003075!2.97e-13!86;UBERON:0007284!2.97e-13!86;UBERON:0002780!4.94e-13!41;UBERON:0001890!4.94e-13!41;UBERON:0006240!4.94e-13!41;UBERON:0003080!1.30e-12!42;UBERON:0002346!2.52e-12!90;UBERON:0000956!4.39e-11!25;UBERON:0000203!4.39e-11!25;UBERON:0003076!6.08e-10!15;UBERON:0003057!6.08e-10!15;UBERON:0000033!4.87e-09!123;UBERON:0000025!1.06e-08!194;UBERON:0004121!1.24e-08!169;UBERON:0000369!2.56e-08!4;UBERON:0002435!2.56e-08!4;UBERON:0000204!2.56e-08!4;UBERON:0010082!2.56e-08!4;UBERON:0001950!2.82e-08!20;UBERON:0000153!2.90e-08!129;UBERON:0007811!2.90e-08!129;UBERON:0000924!3.19e-08!173;UBERON:0006601!3.19e-08!173;UBERON:0003056!3.26e-08!61;UBERON:0004733!1.10e-07!12;UBERON:0002028!1.10e-07!12;UBERON:0007277!1.10e-07!12;UBERON:0002308!2.18e-07!9;UBERON:0000125!2.18e-07!9;UBERON:0002619!2.25e-07!22;UBERON:0004732!5.24e-07!13;UBERON:0005383!6.47e-07!3;UBERON:0005382!6.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.84e-39;19!UBERON:0006925;3.84e-39;19!UBERON:0002423;1.09e-29;25!UBERON:0002365;2.07e-23;31!UBERON:0002330;2.07e-23;31!UBERON:0002368;9.54e-20;33!UBERON:0000949;5.90e-16;43!UBERON:0005172;3.13e-09;52!UBERON:0005173;3.13e-09;52!UBERON:0002530;2.10e-08;57!UBERON:0002417;7.69e-08;58!UBERON:0000916;7.69e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.74e-39,19;UBERON:0006925,3.74e-39,19;UBERON:0008836,3.74e-39,19;UBERON:0008835,8.77e-34,22;UBERON:0003894,8.77e-34,22;UBERON:0009854,2.65e-32,23;UBERON:0007499,1.07e-29,25;UBERON:0009497,1.07e-29,25;UBERON:0000015,1.07e-29,25;UBERON:0002423,1.07e-29,25;UBERON:0006235,1.07e-29,25;UBERON:0004161,1.07e-29,25;UBERON:0009856,1.52e-28,26;UBERON:0002365,6.82e-24,31;UBERON:0002330,6.82e-24,31;UBERON:0002368,4.00e-21,35;UBERON:0000949,2.39e-16,45;UBERON:0003929,1.49e-13,54;UBERON:0005172,1.49e-13,54;UBERON:0005173,1.49e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.73e-12,60;UBERON:0000916,3.73e-12,60;UBERON:0005911,9.16e-09,82;UBERON:0001041,3.13e-08,87;UBERON:0005177,5.13e-07,101 | |||
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|short_description=p4@PIPOX | |||
}} |
Revision as of 12:48, 11 September 2013
Short description: | p4@PIPOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PIPOX_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 314bp_to_ENST00000323372, NM_016518, uc002hdr.1_5end |
EntrezGene: | PIPOX |
HGNC: | 17804 |
UniProt: | Q9P0Z9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.07e-45 | 12 |
endodermal cell | 2.50e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.74e-39 | 19 |
digestive gland | 3.74e-39 | 19 |
liver bud | 3.74e-39 | 19 |
hepatic diverticulum | 8.77e-34 | 22 |
liver primordium | 8.77e-34 | 22 |
digestive tract diverticulum | 2.65e-32 | 23 |
epithelial sac | 1.07e-29 | 25 |
epithelium of foregut-midgut junction | 1.07e-29 | 25 |
anatomical boundary | 1.07e-29 | 25 |
hepatobiliary system | 1.07e-29 | 25 |
foregut-midgut junction | 1.07e-29 | 25 |
septum transversum | 1.07e-29 | 25 |
sac | 1.52e-28 | 26 |
exocrine gland | 6.82e-24 | 31 |
exocrine system | 6.82e-24 | 31 |
endocrine gland | 4.00e-21 | 35 |
endocrine system | 2.39e-16 | 45 |
gut epithelium | 1.49e-13 | 54 |
abdomen element | 1.49e-13 | 54 |
abdominal segment element | 1.49e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.73e-12 | 60 |
abdomen | 3.73e-12 | 60 |
endo-epithelium | 9.16e-09 | 82 |
foregut | 3.13e-08 | 87 |
trunk region element | 5.13e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.