FFCP PHASE1:Hg19::chr17:57134310..57134314,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:57134310..57134314,-|id=chr17:57134310..57134314,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;5.16e-21;1!CL:0002625;5.16e-21;1!CL:0000216;5.16e-21;1!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3|ontology_enrichment_celltype_v019_2=CL:0000511,4.22e-21,1;CL:0002625,4.22e-21,1;CL:0000216,4.22e-21,1;CL:0000346,6.78e-08,3;CL:1000428,6.78e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.28e-07!235;DOID:14566!2.29e-07!239|ontology_enrichment_disease_v019=DOID:5093;2.66e-45;4!DOID:1612;2.66e-45;4!DOID:299;7.84e-08;25|ontology_enrichment_disease_v019_2=DOID:5093,1.97e-45,4;DOID:1612,1.97e-45,4;DOID:299,7.48e-08,25|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;5.16e-21;1!UBERON:0001343;5.16e-21;1!UBERON:0004910;5.16e-21;1!UBERON:0004813;5.16e-21;1!UBERON:0000310;1.28e-18;10!UBERON:0001443;5.40e-17;11!UBERON:0002771;1.82e-11;2!UBERON:0004909;3.34e-11;2!UBERON:0000473;7.67e-11;8!UBERON:0003135;3.89e-08;11!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.22e-21,1;UBERON:0001343,4.22e-21,1;UBERON:0004910,4.22e-21,1;UBERON:0005154,4.22e-21,1;UBERON:0005295,4.22e-21,1;UBERON:0004813,4.22e-21,1;UBERON:0005297,4.22e-21,1;UBERON:0005294,4.22e-21,1;UBERON:0010141,4.22e-21,1;UBERON:0005891,4.22e-21,1;UBERON:0000310,1.14e-18,10;UBERON:0001443,4.85e-17,11;UBERON:0002771,1.82e-11,2;UBERON:0004909,3.02e-11,2;UBERON:0000473,8.47e-11,8;UBERON:0003135,4.18e-08,11;UBERON:0000412,6.78e-08,3;UBERON:0001992,6.78e-08,3|phase1_expression=0,0.428201047781966,0,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0.273748850145768,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0.182664153764634,1.75996244461323,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0.434473211648397,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0,1.06729878806013,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.245668634623536,0,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0.201504196455281,0.339121184620975,0.386521706326594,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.570762456703795,2.37061319387782,1.71697232418975,0,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.224170287987055,0,0.431255149719035,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0,0.40101294060657,0.184161977871793,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0.307007349452259,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0.330569830721956,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0.987884678879706,0,0,0,0.670302275535787,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0,0.478278818186467,0.199579371432817,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0.296964680832639,0,0,0.56267766564205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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:57134310..57134314,- | |||
|id=chr17:57134310..57134314,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.16e-21;1!CL:0002625;5.16e-21;1!CL:0000216;5.16e-21;1!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.22e-21,1;CL:0002625,4.22e-21,1;CL:0000216,4.22e-21,1;CL:0000346,6.78e-08,3;CL:1000428,6.78e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.28e-07!235;DOID:14566!2.29e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.66e-45;4!DOID:1612;2.66e-45;4!DOID:299;7.84e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.97e-45,4;DOID:1612,1.97e-45,4;DOID:299,7.48e-08,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.16e-21;1!UBERON:0001343;5.16e-21;1!UBERON:0004910;5.16e-21;1!UBERON:0004813;5.16e-21;1!UBERON:0000310;1.28e-18;10!UBERON:0001443;5.40e-17;11!UBERON:0002771;1.82e-11;2!UBERON:0004909;3.34e-11;2!UBERON:0000473;7.67e-11;8!UBERON:0003135;3.89e-08;11!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.22e-21,1;UBERON:0001343,4.22e-21,1;UBERON:0004910,4.22e-21,1;UBERON:0005154,4.22e-21,1;UBERON:0005295,4.22e-21,1;UBERON:0004813,4.22e-21,1;UBERON:0005297,4.22e-21,1;UBERON:0005294,4.22e-21,1;UBERON:0010141,4.22e-21,1;UBERON:0005891,4.22e-21,1;UBERON:0000310,1.14e-18,10;UBERON:0001443,4.85e-17,11;UBERON:0002771,1.82e-11,2;UBERON:0004909,3.02e-11,2;UBERON:0000473,8.47e-11,8;UBERON:0003135,4.18e-08,11;UBERON:0000412,6.78e-08,3;UBERON:0001992,6.78e-08,3 | |||
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| |||
|short_description=p@chr17:57134310..57134314,- | |||
}} |
Revision as of 14:50, 11 September 2013
Short description: | p@chr17:57134310..57134314, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57134310..57134314, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.22e-21 | 1 |
seminiferous tubule epithelial cell | 4.22e-21 | 1 |
Sertoli cell | 4.22e-21 | 1 |
hair follicle dermal papilla cell | 6.78e-08 | 3 |
stem cell of epidermis | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.22e-21 | 1 |
seminiferous tubule of testis | 4.22e-21 | 1 |
epithelium of male gonad | 4.22e-21 | 1 |
epithelial cord | 4.22e-21 | 1 |
sex cord | 4.22e-21 | 1 |
seminiferous tubule epithelium | 4.22e-21 | 1 |
testis sex cord | 4.22e-21 | 1 |
genital ridge | 4.22e-21 | 1 |
primitive sex cord of indifferent gonad | 4.22e-21 | 1 |
coelomic epithelium | 4.22e-21 | 1 |
breast | 1.14e-18 | 10 |
chest | 4.85e-17 | 11 |
middle temporal gyrus | 1.82e-11 | 2 |
epithelium of gonad | 3.02e-11 | 2 |
testis | 8.47e-11 | 8 |
male reproductive organ | 4.18e-08 | 11 |
dermal papilla | 6.78e-08 | 3 |
papillary layer of dermis | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.97e-45 | 4 |
breast cancer | 1.97e-45 | 4 |
adenocarcinoma | 7.48e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.