FFCP PHASE1:Hg19::chr17:76356148..76356165,-: Difference between revisions
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{{FFCP | 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040758923,49.0143316949554,28.1345044043913,22.0001623364395,47.1663122429079,23.9526859671613,13.1022914159686,72.6402631710878,56.0121218518209,10.9709351635459,2.7348740450911,6.030835435429,31.2613042385255,1.58284119923659,54.4267941744676,22.499477106888,19.8407396109106,12.1393120847326,40.523870060531,80.5417521076761,44.1346172338635,131.702791247937,35.7520795458135,5.45914020571647,31.4395616751355,17.685792900839,106.122661533895,105.738792013469,30.549665801203,18.2631744101899,43.1855182437243,12.8992955729504,57.395664973855,0.632054446930906,51.029985736607,32.8592134651875,99.4122092265514,10.1535920439888,8.1944869005096,14.5164528980959,16.7788669939908,12.1881960752482,13.2080777376694,33.0241899148925,21.9942593802288,60.8004515902067,10.5109283287518,206.261416235129,21.1023002272772,36.3315416447163,20.0702939528247,123.811345068634,22.0364741954258,18.4570177362473,4.2109103423179,2.38740930193642,0.83244063544298,3.27543637912984,0.439762066981716,5.43466236840025,71.5404445660647,13.3321331907414,4.23285566725371,41.43006637641,8.95570878986179,188.456128430347,52.2801664575671,44.8015071238404,41.6321430985151,166.539502660301,130.398307370547,4.19752854884702,36.9606652913711,67.4029204976971,16.4494801712795,45.2808560712841,17.4317127693725,69.3763582453024,41.3361492946144,12.5104341951283,3.05445483238264,19.5739930990698,80.3509239240183,260.204878919488,66.6244905670635,10.8503125358168,1.52971800749174,90.2093327201431,15.6042909505232,51.5729592162532,29.4982627506852,2.50707539292375,83.5839041347181,8.57485216499771,131.837940873946,44.6830542123387,39.8747546154834,12.6174148675782,22.7998851721102,68.7167087255147,5.38232940386944,64.0926883861121,20.8180704626966,188.542703678769,29.7742971944195,48.830238435576,267.021770676934,44.5764877771658,28.9795636255069,35.4334788314015,55.9909618632126,11.9467518801761,65.6994638729672,52.197096666084,5.2896503181046,209.713383868436,62.7974236004002,37.8270820917815|short_description=p1@SOCS3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=9021 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19391 | |||
|TSSclassifier=S | |||
|UniProt=O14543,Q6FI39 | |||
|association_with_transcript=0bp_to_ENST00000330871,NM_003955,uc002jvl.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_SOCS3_5end | |||
|id=chr17:76356148..76356165,- | |||
|ontology_enrichment_celltype=CL:0002057!1.44e-17!42;CL:0000860!7.85e-16!45;CL:0000766!7.00e-12!76;CL:0000557!7.56e-10!71;CL:0002009!1.16e-09!65;CL:0002194!7.28e-09!63;CL:0000576!7.28e-09!63;CL:0000040!7.28e-09!63;CL:0000559!7.28e-09!63;CL:0000839!1.07e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.33e-18;33!CL:0002057;5.33e-18;33!CL:0000473;1.52e-12;39!CL:0000234;1.52e-12;39!CL:0000576;9.59e-09;48!CL:0000766;6.02e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-17,42;CL:0002057,1.44e-17,42;CL:0000473,7.59e-15,48;CL:0000234,7.59e-15,48;CL:0000766,1.93e-13,72;CL:0000557,2.86e-11,67;CL:0002009,3.89e-11,61;CL:0002194,2.83e-10,59;CL:0000576,2.83e-10,59;CL:0000040,2.83e-10,59;CL:0000559,2.83e-10,59;CL:0000839,6.95e-09,66;CL:0000738,7.76e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.87e-13!112;UBERON:0002390!3.54e-13!102;UBERON:0003061!3.54e-13!102;UBERON:0002405!5.46e-11!115;UBERON:0002371!2.80e-10!80;UBERON:0003081!8.81e-10!216;UBERON:0001474!2.63e-09!86;UBERON:0004765!7.13e-09!101;UBERON:0001434!7.13e-09!101;UBERON:0002204!1.02e-08!167;UBERON:0000926!7.62e-07!448;UBERON:0004120!7.62e-07!448;UBERON:0006603!7.62e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.47e-14,108;UBERON:0002390,1.52e-14,98;UBERON:0003061,1.52e-14,98;UBERON:0002405,4.79e-12,93;UBERON:0002371,1.25e-11,76;UBERON:0004765,3.45e-11,90;UBERON:0001434,6.00e-11,100;UBERON:0002204,1.42e-10,167;UBERON:0001474,1.69e-10,82;UBERON:0003081,1.33e-09,203;UBERON:0000926,2.71e-09,315;UBERON:0004120,2.71e-09,315;UBERON:0006603,2.71e-09,315 | |||
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| |||
|short_description=p1@SOCS3 | |||
}} |
Revision as of 16:03, 11 September 2013
Short description: | p1@SOCS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SOCS3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000330871, NM_003955, uc002jvl.2_5end |
EntrezGene: | SOCS3 |
HGNC: | 19391 |
UniProt: | O14543Q6FI39 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-17 | 42 |
defensive cell | 7.59e-15 | 48 |
phagocyte | 7.59e-15 | 48 |
myeloid leukocyte | 1.93e-13 | 72 |
granulocyte monocyte progenitor cell | 2.86e-11 | 67 |
macrophage dendritic cell progenitor | 3.89e-11 | 61 |
monopoietic cell | 2.83e-10 | 59 |
monocyte | 2.83e-10 | 59 |
monoblast | 2.83e-10 | 59 |
promonocyte | 2.83e-10 | 59 |
myeloid lineage restricted progenitor cell | 6.95e-09 | 66 |
leukocyte | 7.76e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.47e-14 | 108 |
hematopoietic system | 1.52e-14 | 98 |
blood island | 1.52e-14 | 98 |
immune system | 4.79e-12 | 93 |
bone marrow | 1.25e-11 | 76 |
skeletal element | 3.45e-11 | 90 |
skeletal system | 6.00e-11 | 100 |
musculoskeletal system | 1.42e-10 | 167 |
bone element | 1.69e-10 | 82 |
lateral plate mesoderm | 1.33e-09 | 203 |
mesoderm | 2.71e-09 | 315 |
mesoderm-derived structure | 2.71e-09 | 315 |
presumptive mesoderm | 2.71e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.