FFCP PHASE1:Hg19::chr18:10454585..10454593,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147495|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15718|TSSclassifier=S|UniProt=Q8J025|association_with_transcript=-31bp_to_ENST00000355285,NM_153000,uc002kom.3_5end|description=CAGE_peak_3_at_APCDD1_5end|id=chr18:10454585..10454593,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:171;1.16e-10;10|ontology_enrichment_disease_v019_2=DOID:171,9.34e-11,10|ontology_enrichment_uberon=UBERON:0007023!9.15e-31!115;UBERON:0000924!1.15e-25!173;UBERON:0006601!1.15e-25!173;UBERON:0002346!5.45e-24!90;UBERON:0004121!5.22e-23!169;UBERON:0001049!4.04e-22!57;UBERON:0005068!4.04e-22!57;UBERON:0006241!4.04e-22!57;UBERON:0007135!4.04e-22!57;UBERON:0000153!6.25e-22!129;UBERON:0007811!6.25e-22!129;UBERON:0000033!1.39e-21!123;UBERON:0003075!5.96e-21!86;UBERON:0007284!5.96e-21!86;UBERON:0005743!3.55e-18!86;UBERON:0000955!4.15e-18!69;UBERON:0006238!4.15e-18!69;UBERON:0000073!4.74e-18!94;UBERON:0001016!4.74e-18!94;UBERON:0001017!5.91e-18!82;UBERON:0002616!8.15e-18!59;UBERON:0002780!4.62e-17!41;UBERON:0001890!4.62e-17!41;UBERON:0006240!4.62e-17!41;UBERON:0003080!2.26e-16!42;UBERON:0003056!6.22e-16!61;UBERON:0001893!9.41e-16!34;UBERON:0002020!2.16e-15!34;UBERON:0003528!2.16e-15!34;UBERON:0002791!3.52e-15!33;UBERON:0001869!1.47e-14!32;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0000475!8.08e-10!365;UBERON:0000468!2.64e-09!659;UBERON:0002619!4.00e-09!22;UBERON:0000062!6.32e-08!511;UBERON:0001950!1.14e-07!20;UBERON:0000064!2.67e-07!219;UBERON:0003076!5.51e-07!15;UBERON:0003057!5.51e-07!15;UBERON:0000922!6.45e-07!612|ontology_enrichment_uberon_v019=UBERON:0002050;3.68e-21;5!UBERON:0005423;3.68e-21;5!UBERON:0002346;2.78e-17;4!UBERON:0000923;2.78e-17;4!UBERON:0010316;2.78e-17;4!UBERON:0005291;2.78e-17;4|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.87e-14,171;UBERON:0000924,6.87e-14,171;UBERON:0006601,6.87e-14,171;UBERON:0007023,5.77e-10,114;UBERON:0002346,6.31e-10,86;UBERON:0001016,5.80e-07,89;UBERON:0001017,7.84e-07,81|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,1.82829939739887,0,0,0,0,0.37129905888014,0,0,0,0,0,0.369363174230364,0,0.940364164434263,1.14494394852423,0.684372125364421,0.87879847716362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.283604451492204,0,0,0.327447688744282,0.364295288292542,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0.298897361103602,0.23486899728753,0.647491777472526,0.842704840213491,0,0.737005903870608,0.723280468230358,2.37600571456411,0.494533858557114,0,0,1.34668891163253,0.500474079487857,0.277064115484183,0.438977620880838,0,0.751190294532984,0,0,0.213557388818567,0,0,0,0.257640540045629,0.558350568994769,0,0,0,0.276149695926898,0,0,0.10075209822764,0.169560592310488,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.518305275076852,0.252320850875628,0,0,1.28648187638577,0,1.39310378409594,0,0.354920400119532,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0.122988438543114,0,0.98775256867763,0,0.201057944823262,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0.144119953416961,0,0.317489471460845,0,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0.771622122786426,0,0.266422179016099,0,2.71310802695722,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,0,2.0694614258501,0,0,1.21637060255316,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.640986253728404,0.082509499920588,0.574265537996172,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0.165284915360978,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.294747123039363,0,0,0,0,0.75894634753143,0.699869440489966,0,0,0,0.188287601553558,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,3.10367830158997,0.593929361665277,2.45728561679386,0,0.703347082052564,0.445234820091624,0,0,1.39473591775749,0,0,0.102268682502155,0,0.311039587661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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147495 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15718 | |||
|TSSclassifier=S | |||
|UniProt=Q8J025 | |||
|association_with_transcript=-31bp_to_ENST00000355285,NM_153000,uc002kom.3_5end | |||
|description=CAGE_peak_3_at_APCDD1_5end | |||
|id=chr18:10454585..10454593,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.16e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,9.34e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.15e-31!115;UBERON:0000924!1.15e-25!173;UBERON:0006601!1.15e-25!173;UBERON:0002346!5.45e-24!90;UBERON:0004121!5.22e-23!169;UBERON:0001049!4.04e-22!57;UBERON:0005068!4.04e-22!57;UBERON:0006241!4.04e-22!57;UBERON:0007135!4.04e-22!57;UBERON:0000153!6.25e-22!129;UBERON:0007811!6.25e-22!129;UBERON:0000033!1.39e-21!123;UBERON:0003075!5.96e-21!86;UBERON:0007284!5.96e-21!86;UBERON:0005743!3.55e-18!86;UBERON:0000955!4.15e-18!69;UBERON:0006238!4.15e-18!69;UBERON:0000073!4.74e-18!94;UBERON:0001016!4.74e-18!94;UBERON:0001017!5.91e-18!82;UBERON:0002616!8.15e-18!59;UBERON:0002780!4.62e-17!41;UBERON:0001890!4.62e-17!41;UBERON:0006240!4.62e-17!41;UBERON:0003080!2.26e-16!42;UBERON:0003056!6.22e-16!61;UBERON:0001893!9.41e-16!34;UBERON:0002020!2.16e-15!34;UBERON:0003528!2.16e-15!34;UBERON:0002791!3.52e-15!33;UBERON:0001869!1.47e-14!32;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0000475!8.08e-10!365;UBERON:0000468!2.64e-09!659;UBERON:0002619!4.00e-09!22;UBERON:0000062!6.32e-08!511;UBERON:0001950!1.14e-07!20;UBERON:0000064!2.67e-07!219;UBERON:0003076!5.51e-07!15;UBERON:0003057!5.51e-07!15;UBERON:0000922!6.45e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002050;3.68e-21;5!UBERON:0005423;3.68e-21;5!UBERON:0002346;2.78e-17;4!UBERON:0000923;2.78e-17;4!UBERON:0010316;2.78e-17;4!UBERON:0005291;2.78e-17;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.87e-14,171;UBERON:0000924,6.87e-14,171;UBERON:0006601,6.87e-14,171;UBERON:0007023,5.77e-10,114;UBERON:0002346,6.31e-10,86;UBERON:0001016,5.80e-07,89;UBERON:0001017,7.84e-07,81 | |||
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| |||
|short_description=p3@APCDD1 | |||
}} |
Revision as of 16:49, 11 September 2013
Short description: | p3@APCDD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_APCDD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000355285, NM_153000, uc002kom.3_5end |
EntrezGene: | APCDD1 |
HGNC: | 15718 |
UniProt: | Q8J025 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 6.87e-14 | 171 |
ectoderm | 6.87e-14 | 171 |
presumptive ectoderm | 6.87e-14 | 171 |
adult organism | 5.77e-10 | 114 |
neurectoderm | 6.31e-10 | 86 |
nervous system | 5.80e-07 | 89 |
central nervous system | 7.84e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 9.34e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.