FFCP PHASE1:Hg19::chr18:3604111..3604122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=375bp_to_ENST00000445581,uc002kmi.2_5end|description=CAGE_peak_8_at_ENST00000445581_5end,CAGE_peak_8_at_uc002kmi.2_5end|id=chr18:3604111..3604122,+|ontology_enrichment_celltype=CL:0000548!1.27e-11!679;CL:0000004!1.27e-11!679;CL:0000255!1.27e-11!679;CL:0000012!3.05e-11!682;CL:0000055!1.50e-10!180;CL:0000148!2.45e-07!10;CL:0000541!2.45e-07!10;CL:0000133!5.54e-07!59;CL:0000003!6.03e-07!722|ontology_enrichment_celltype_v019=CL:0002322;6.36e-17;5!CL:0000148;6.54e-12;10!CL:0000147;4.51e-11;14!CL:0000039;6.93e-08;7!CL:0000586;6.93e-08;7!CL:0002321;1.18e-07;15|ontology_enrichment_celltype_v019_2=CL:0002322,5.97e-17,5;CL:0000148,6.31e-12,10;CL:0000541,6.31e-12,10;CL:0000147,4.29e-11,14;CL:0000039,3.90e-08,7;CL:0000586,3.90e-08,7|ontology_enrichment_development_v019=UBERON:0009117;2.36e-08;10!UBERON:0005564;2.36e-08;10|ontology_enrichment_disease=DOID:305!2.18e-10!106;DOID:0050687!1.45e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;6.71e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.08e-07,8|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,2.44867113896722,2.24650318953266,1.27867425159808,0,0,0,1.7412554317715,1.13477044938228,1.24564449799115,0.251248665256743,0,0.217188844705117,0,1.47311054395026,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,1.19168262731897,1.14734648299525,0,1.68203280042692,0,0.24666754841716,0,0.538842688278752,0,0,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0,0,0.831192346452549,0,0.919463387397059,0,0.226864366320042,1.79389635688862,0.213557388818567,0.423863802319124,3.00091096084402,0,2.06112432036503,0.18611685633159,1.85653965465393,0.0974370051611986,1.26216887122057,0.0920498986422993,0,3.19508633264953,0,0.169560592310488,0,0,0.286804595389004,2.19552671033272,1.19276791489337,2.20768491452085,1.96956004529204,1.26160425437814,1.82488679537915,0,0,0,0,0,1.18306800039844,0.842923450390509,0,1.43382164552112,0.653638332277218,0.71181185733329,0.943819157121151,0.98110732562673,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0,0.977424915930974,0,0,0.811512834825538,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0.63497894292169,3.4378958300245,1.17217447210047,0,0.822619941626588,2.40274446275134,0.571652865261156,0,0,0,0.904902010304444,0,0.845302752556,0,0,0.514414748524284,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.178428988797162,0.946214490203608,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0.31481234683064,0,0,0.532306030317022,1.73986598415015,0,0.858749320451947,0,0,0,0.255897791311334,0,0,1.56989728039846,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0,0.349934720244983,0.192444225451024,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.920418142519393,0,0,0.0898683511473268,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.978323094660449,1.21390189767046,0,0,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0.277349346026277,0.520679215005393,0,0.261177619741208,0,1.0319161948297,0.677294319023596,1.97341156132701,0.656923656425674,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0.391102765469606,0.0801588202515337,0,0,0.864542502924636,0.458146384663663,0,0,0,2.12124631155116,0,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.27955725969173,0,0,0.136203406111576,3.69732241469544,4.81388028090318,5.40072439437941,0,0,0,0,0,0,0.211200673038813,0.896436696664224,0.575745591958336,0,0,0.5085370753095,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0.909894705249887,0.856396000634902,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0,0.889811221596536,1.60188047877847,0.604923695052956,0.15543720058278,0.591420599958536,0.318593534327405,2.69881867298163,0.776314784381297,0,0.797525143673985,0,0.300515217994437,0,0,0.545545977607678,0.537052785212442,0.464033759878494,0.398095888698616,0.400027764663154,0,0,2.52369796457302,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0.537266523244462,0,0,0.176689145945881,0.38582807654183,0.675769762612291,0,1.0362910251936,0,0,0,0,0.163565394255844,0,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0.169732529954025,0,0,0.558644917973244,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,1.29766695682514,0,0,1.1441462864015,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.77290761325952,0.222462803784138,0.078493092850514,0,0.280272163313789,0,0,0,0.214429632529969,0,0.23248285073625,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.473328002922261,0.255640214277473,0,1.14553434272025,0.62041277132864,0,0,0.294450700845729,0.365753774946808,0,0.102662806856247,0,0,0,0,0.356760272332706,1.58124514854544,0,0,0.0771741581079447,0,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0,0,1.2498775702396,0,0.882655033580851,0,0,0,0,0,0,0,0,0,0,2.3971620718665,2.4038425832013,0,1.93778776509765,3.47382626845229,1.56221329209236,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.960546112899439,0,0.269475606319761,0,0,0,0,0,0|short_description=p8@ENST00000445581,p8@uc002kmi.2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=375bp_to_ENST00000445581,uc002kmi.2_5end | |||
|description=CAGE_peak_8_at_ENST00000445581_5end,CAGE_peak_8_at_uc002kmi.2_5end | |||
|id=chr18:3604111..3604122,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.27e-11!679;CL:0000004!1.27e-11!679;CL:0000255!1.27e-11!679;CL:0000012!3.05e-11!682;CL:0000055!1.50e-10!180;CL:0000148!2.45e-07!10;CL:0000541!2.45e-07!10;CL:0000133!5.54e-07!59;CL:0000003!6.03e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.36e-17;5!CL:0000148;6.54e-12;10!CL:0000147;4.51e-11;14!CL:0000039;6.93e-08;7!CL:0000586;6.93e-08;7!CL:0002321;1.18e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.97e-17,5;CL:0000148,6.31e-12,10;CL:0000541,6.31e-12,10;CL:0000147,4.29e-11,14;CL:0000039,3.90e-08,7;CL:0000586,3.90e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.36e-08;10!UBERON:0005564;2.36e-08;10 | |||
|ontology_enrichment_disease=DOID:305!2.18e-10!106;DOID:0050687!1.45e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.71e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.08e-07,8 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.464858073811369,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,2.44867113896722,2.24650318953266,1.27867425159808,0,0,0,1.7412554317715,1.13477044938228,1.24564449799115,0.251248665256743,0,0.217188844705117,0,1.47311054395026,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,0.443458794925128,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0,0.367663080345869,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,1.19168262731897,1.14734648299525,0,1.68203280042692,0,0.24666754841716,0,0.538842688278752,0,0,0,0.234321431833797,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0.122834317311768,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0,0,0.831192346452549,0,0.919463387397059,0,0.226864366320042,1.79389635688862,0.213557388818567,0.423863802319124,3.00091096084402,0,2.06112432036503,0.18611685633159,1.85653965465393,0.0974370051611986,1.26216887122057,0.0920498986422993,0,3.19508633264953,0,0.169560592310488,0,0,0.286804595389004,2.19552671033272,1.19276791489337,2.20768491452085,1.96956004529204,1.26160425437814,1.82488679537915,0,0,0,0,0,1.18306800039844,0.842923450390509,0,1.43382164552112,0.653638332277218,0.71181185733329,0.943819157121151,0.98110732562673,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0,0.977424915930974,0,0,0.811512834825538,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0,0,0,0,0,0,0.63497894292169,3.4378958300245,1.17217447210047,0,0.822619941626588,2.40274446275134,0.571652865261156,0,0,0,0.904902010304444,0,0.845302752556,0,0,0.514414748524284,0,0,0.428933980974443,0,0.823240336780769,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0.479249710983165,2.29723871668228,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0.178428988797162,0.946214490203608,0,0.601892199455438,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30151357865721,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0.384380134730212,0.255225424989168,0.30347334256665,0,0.31481234683064,0,0,0.532306030317022,1.73986598415015,0,0.858749320451947,0,0,0,0.255897791311334,0,0,1.56989728039846,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0.66343897524122,0,0,0,0.405820753925408,0,0,0.286822704408103,0.196498082026242,0,0,0.211107635297664,0.658589785919804,0,0.349934720244983,0.192444225451024,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.485442086998054,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0.920418142519393,0,0,0.0898683511473268,0.895105873378046,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0.871507708151921,0.139423744278603,0,0.455768223388005,0,0,0,0.31900115973192,0,0,0,0,0,0.225595660617181,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0.978323094660449,1.21390189767046,0,0,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0.277349346026277,0.520679215005393,0,0.261177619741208,0,1.0319161948297,0.677294319023596,1.97341156132701,0.656923656425674,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0.391102765469606,0.0801588202515337,0,0,0.864542502924636,0.458146384663663,0,0,0,2.12124631155116,0,0.313808538937,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,1.27955725969173,0,0,0.136203406111576,3.69732241469544,4.81388028090318,5.40072439437941,0,0,0,0,0,0,0.211200673038813,0.896436696664224,0.575745591958336,0,0,0.5085370753095,0,0.864221491201268,0.326587360109409,0,0.164185041498678,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0.909894705249887,0.856396000634902,0,0,0,0.298509605773748,0,0.554805861502613,0.378806010550178,0,0.889811221596536,1.60188047877847,0.604923695052956,0.15543720058278,0.591420599958536,0.318593534327405,2.69881867298163,0.776314784381297,0,0.797525143673985,0,0.300515217994437,0,0,0.545545977607678,0.537052785212442,0.464033759878494,0.398095888698616,0.400027764663154,0,0,2.52369796457302,0.192619830407303,0.214441591374926,0.260994291965212,0.226705925512272,0,0.244736704506468,0.537266523244462,0,0,0.176689145945881,0.38582807654183,0.675769762612291,0,1.0362910251936,0,0,0,0,0.163565394255844,0,0.491545817507439,0.211312123358627,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0.169732529954025,0,0,0.558644917973244,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,1.29766695682514,0,0,1.1441462864015,0,0.198916222116275,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,1.77290761325952,0.222462803784138,0.078493092850514,0,0.280272163313789,0,0,0,0.214429632529969,0,0.23248285073625,0,0.801711364730253,0.207216164163037,0.17071847709395,0,0,0.473328002922261,0.255640214277473,0,1.14553434272025,0.62041277132864,0,0,0.294450700845729,0.365753774946808,0,0.102662806856247,0,0,0,0,0.356760272332706,1.58124514854544,0,0,0.0771741581079447,0,0,0,0,0,0,0.8453114551668,0.339854229375634,0,0,0,1.2498775702396,0,0.882655033580851,0,0,0,0,0,0,0,0,0,0,2.3971620718665,2.4038425832013,0,1.93778776509765,3.47382626845229,1.56221329209236,1.50424523575425,0,0,0,0,0,0,0,0,0.112131862580613,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.960546112899439,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p8@ENST00000445581,p8@uc002kmi.2 | |||
}} |
Revision as of 17:25, 11 September 2013
Short description: | p8@ENST00000445581, p8@uc002kmi.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_ENST00000445581_5end, CAGE_peak_8_at_uc002kmi.2_5end |
Coexpression cluster: | NA |
Association with transcript: | 375bp_to_ENST00000445581, uc002kmi.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.97e-17 | 5 |
melanocyte | 6.31e-12 | 10 |
melanoblast | 6.31e-12 | 10 |
pigment cell | 4.29e-11 | 14 |
germ line cell | 3.90e-08 | 7 |
germ cell | 3.90e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.08e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.