FFCP PHASE1:Hg19::chr19:40170009..40170016,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=400696|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000412609,ENST00000455832,NR_034156,uc010xve.1,uc010xvf.1_5end|description=CAGE_peak_1_at_LGALS17A_5end|id=chr19:40170009..40170016,+|ontology_enrichment_celltype=CL:0000838!2.99e-13!52;CL:0000542!7.61e-13!53;CL:0000051!7.61e-13!53;CL:0002087!8.56e-11!119;CL:0000080!5.10e-09!6;CL:0002031!4.92e-08!124;CL:0000738!1.74e-07!140|ontology_enrichment_celltype_v019=CL:0000084;4.32e-12;25!CL:0000945;2.59e-11;24!CL:0000542;4.55e-10;53!CL:0000625;1.52e-07;11|ontology_enrichment_celltype_v019_2=CL:0000838,1.13e-20,52;CL:0000542,3.42e-20,53;CL:0000051,3.42e-20,53;CL:0002087,7.52e-16,115;CL:0002031,6.41e-15,120;CL:0000738,2.08e-12,136;CL:0000084,3.47e-12,25;CL:0000827,3.47e-12,25;CL:0000945,2.73e-11,24;CL:0000826,2.73e-11,24;CL:0000988,6.06e-11,177;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,7.43e-09,168;CL:0000625,1.43e-07,11|ontology_enrichment_development_v019=CL:0000051;4.55e-10;53|ontology_enrichment_disease=DOID:0060058!2.89e-07!10|ontology_enrichment_disease_v019=DOID:0060058;7.46e-13;10|ontology_enrichment_disease_v019_2=DOID:0060058,6.73e-13,10|ontology_enrichment_uberon=UBERON:0007023!5.27e-12!115;UBERON:0000178!1.06e-11!15;UBERON:0000179!1.06e-11!15;UBERON:0000463!1.06e-11!15;UBERON:0004177!7.54e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,8.71112825526644,5.09023654589664,7.24139188085849,0,0,0,0,0,0,0,21.8940618030629,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,1.1507695692886,2.0492856522328,3.78371567821736,0,0,0,0,0,0,0,0,0,1.64925650093358,4.9865914405408,0.852449501065388,0,0,0,2.76373531782418,2.60741459210101,1.52032191293582,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0,1.00311897234407,0,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0.812411591295047,0.896639238079726,3.77172107923647,0,0,1.15921234294021,3.41059095272739,2.94294910898684,2.09071047609954,0.679856056185397,5.3650869104269,0.34362744548263,1.51811815211702,2.54852331459277,0,0,1.50575119077773,1.27986611154418,2.49861453104692,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,1.67165076416218,0,0,0,0,0,0,0,27.8518547443224,0,0,0.552567831062295,0,20.8628112304396,5.90807066213134,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.886642856860642,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,3.05515072466813,15.1225775627117,27.4311944461236,27.1497068714184,0.202203398942031,6.42062117839031,0.234264445725339,0.364909578431332,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,2.79562669187248,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,2.11683330164461,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,2.24253566392159,0,0,0.992332043623902,3.16178611036711,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,1.1177352529449,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66968526632067,0,4.39972270880846,0,8.09410404405834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,20.2811818098171,0,0,0.0657727735628491,0,0,0.627944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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=400696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000412609,ENST00000455832,NR_034156,uc010xve.1,uc010xvf.1_5end | |||
|description=CAGE_peak_1_at_LGALS17A_5end | |||
|id=chr19:40170009..40170016,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.99e-13!52;CL:0000542!7.61e-13!53;CL:0000051!7.61e-13!53;CL:0002087!8.56e-11!119;CL:0000080!5.10e-09!6;CL:0002031!4.92e-08!124;CL:0000738!1.74e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.32e-12;25!CL:0000945;2.59e-11;24!CL:0000542;4.55e-10;53!CL:0000625;1.52e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.13e-20,52;CL:0000542,3.42e-20,53;CL:0000051,3.42e-20,53;CL:0002087,7.52e-16,115;CL:0002031,6.41e-15,120;CL:0000738,2.08e-12,136;CL:0000084,3.47e-12,25;CL:0000827,3.47e-12,25;CL:0000945,2.73e-11,24;CL:0000826,2.73e-11,24;CL:0000988,6.06e-11,177;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,7.43e-09,168;CL:0000625,1.43e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.55e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!2.89e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;7.46e-13;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.73e-13,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-12!115;UBERON:0000178!1.06e-11!15;UBERON:0000179!1.06e-11!15;UBERON:0000463!1.06e-11!15;UBERON:0004177!7.54e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,8.71112825526644,5.09023654589664,7.24139188085849,0,0,0,0,0,0,0,21.8940618030629,0,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,1.1507695692886,2.0492856522328,3.78371567821736,0,0,0,0,0,0,0,0,0,1.64925650093358,4.9865914405408,0.852449501065388,0,0,0,2.76373531782418,2.60741459210101,1.52032191293582,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0,1.00311897234407,0,0,0,0.445641827540694,0.589211814949674,0.221533894583621,0.812411591295047,0.896639238079726,3.77172107923647,0,0,1.15921234294021,3.41059095272739,2.94294910898684,2.09071047609954,0.679856056185397,5.3650869104269,0.34362744548263,1.51811815211702,2.54852331459277,0,0,1.50575119077773,1.27986611154418,2.49861453104692,1.4206635122641,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0.649094787309367,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,1.67165076416218,0,0,0,0,0,0,0,27.8518547443224,0,0,0.552567831062295,0,20.8628112304396,5.90807066213134,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0.886642856860642,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,3.05515072466813,15.1225775627117,27.4311944461236,27.1497068714184,0.202203398942031,6.42062117839031,0.234264445725339,0.364909578431332,0.19566461893209,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0.284609546029793,0,0,0,0,2.79562669187248,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0.599428828746391,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0.273810757783986,0,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,2.11683330164461,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,2.24253566392159,0,0,0.992332043623902,3.16178611036711,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,1.1177352529449,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66968526632067,0,4.39972270880846,0,8.09410404405834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,20.2811818098171,0,0,0.0657727735628491,0,0,0.627944742804112,0.157115589916002,0,0,7.77339328387037,0.47775168788705,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.785201868921944,0,0,7.18639647993729,2.3196288626764,0.971421986118279,0.233939463462106,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,5.89652819957081,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0.639701945702943,1.90451545170992,0.258355639344024,0.869046000142011,0,7.38307036026713,0.202117188958219,1.30630048738177,6.84466602170562,0.5388164241167,1.07583308089015,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,24.6837739073489 | |||
|short_description=p1@LGALS17A | |||
}} |
Revision as of 20:37, 11 September 2013
Short description: | p1@LGALS17A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LGALS17A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412609, ENST00000455832, NR_034156, uc010xve.1, uc010xvf.1_5end |
EntrezGene: | LGALS17A |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.13e-20 | 52 |
lymphocyte | 3.42e-20 | 53 |
common lymphoid progenitor | 3.42e-20 | 53 |
nongranular leukocyte | 7.52e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 6.41e-15 | 120 |
leukocyte | 2.08e-12 | 136 |
T cell | 3.47e-12 | 25 |
pro-T cell | 3.47e-12 | 25 |
lymphocyte of B lineage | 2.73e-11 | 24 |
pro-B cell | 2.73e-11 | 24 |
hematopoietic cell | 6.06e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 7.43e-09 | 168 |
CD8-positive, alpha-beta T cell | 1.43e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.73e-13 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.