FFCP PHASE1:Hg19::chr1:45087872..45087892,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:45087872..45087892,+|id=chr1:45087872..45087892,+|ontology_enrichment_celltype=CL:0002620!5.60e-14!23;CL:0000057!9.61e-13!75;CL:0002551!9.86e-11!6;CL:0000055!3.58e-09!180;CL:0002583!1.11e-08!2;CL:1000449!1.61e-07!16;CL:1000507!3.22e-07!12;CL:1000494!3.22e-07!12;CL:0002681!7.43e-07!13;CL:0002584!7.43e-07!13|ontology_enrichment_celltype_v019=CL:0002551;3.10e-66;6!CL:0002620;9.21e-18;23!CL:0002583;8.82e-14;2!CL:0000047;1.29e-13;2!CL:0000346;1.60e-09;3!CL:1000428;1.60e-09;3!CL:0000057;3.60e-08;73|ontology_enrichment_celltype_v019_2=CL:0002551,3.67e-66,6;CL:0002620,9.62e-18,23;CL:0002583,9.40e-14,2;CL:0000346,1.41e-09,3;CL:1000428,1.41e-09,3;CL:0000057,2.00e-08,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!8.59e-07!5;DOID:450!8.59e-07!5;DOID:66!8.59e-07!5;DOID:423!8.59e-07!5;DOID:0080000!8.59e-07!5;DOID:11722!8.59e-07!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002199!8.81e-13!45;UBERON:0002416!8.81e-13!45;UBERON:0002067!9.51e-11!9;UBERON:0004016!9.51e-11!9;UBERON:0010083!9.51e-11!9;UBERON:0002097!1.42e-10!40;UBERON:0004211!1.61e-07!16;UBERON:0001285!1.61e-07!16;UBERON:0007684!1.61e-07!16;UBERON:0003220!1.61e-07!16;UBERON:0004208!1.61e-07!16;UBERON:0002113!3.02e-07!27;UBERON:0003918!3.02e-07!27;UBERON:0005095!3.02e-07!27;UBERON:0007687!3.02e-07!27;UBERON:0009773!3.22e-07!12;UBERON:0001231!3.22e-07!12;UBERON:0004810!3.22e-07!12;UBERON:0003102!4.78e-07!95;UBERON:0006555!4.89e-07!17;UBERON:0005103!4.89e-07!17;UBERON:0000083!4.89e-07!17;UBERON:0009201!4.89e-07!17;UBERON:0004819!4.89e-07!17;UBERON:0006553!4.89e-07!17;UBERON:0003074!4.89e-07!17;UBERON:0003060!4.89e-07!17;UBERON:0001225!7.43e-07!13;UBERON:0008987!7.43e-07!13|ontology_enrichment_uberon_v019=UBERON:0002067;1.41e-68;9!UBERON:0003102;3.11e-15;50!UBERON:0004923;1.61e-12;55!UBERON:0002097;4.12e-12;41!UBERON:0002199;1.12e-11;46!UBERON:0002416;1.12e-11;46!UBERON:0000412;1.60e-09;3!UBERON:0001992;1.60e-09;3|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.31e-68,9;UBERON:0004016,1.31e-68,9;UBERON:0010083,1.31e-68,9;UBERON:0002199,1.57e-19,46;UBERON:0002416,1.57e-19,46;UBERON:0002097,2.10e-15,41;UBERON:0004923,1.15e-09,66;UBERON:0000412,1.41e-09,3;UBERON:0001992,1.41e-09,3;UBERON:0003102,3.88e-09,99;UBERON:0002329,5.35e-09,71;UBERON:0003059,5.35e-09,71;UBERON:0007282,5.35e-09,71;UBERON:0004290,5.35e-09,71;UBERON:0009618,5.35e-09,71;UBERON:0003077,7.10e-09,72;UBERON:0007285,7.10e-09,72;UBERON:0007524,9.34e-09,73;UBERON:0007503,3.31e-08,78;UBERON:0000486,1.01e-07,83;UBERON:0010314,8.73e-07,132|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,1.1409436430889,0,4.46251094846307,2.5899671098901,5.05622904128095,0,0.368502951935304,0,0,0,0.910161361938026,0,0.168336113954066,0.875829639103749,0,0,0,0,0,0.358779271377724,0.213557388818567,0,0,0.206105058476878,0,0,0,0,0,0.368199594569197,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46735510084249,0.532685175939381,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0,0,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.413509717453592,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22439575525196,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.786818822024972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,0.310525913752519,0,0.265841714557995,0,0,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:45087872..45087892,+ | |||
|id=chr1:45087872..45087892,+ | |||
|ontology_enrichment_celltype=CL:0002620!5.60e-14!23;CL:0000057!9.61e-13!75;CL:0002551!9.86e-11!6;CL:0000055!3.58e-09!180;CL:0002583!1.11e-08!2;CL:1000449!1.61e-07!16;CL:1000507!3.22e-07!12;CL:1000494!3.22e-07!12;CL:0002681!7.43e-07!13;CL:0002584!7.43e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002551;3.10e-66;6!CL:0002620;9.21e-18;23!CL:0002583;8.82e-14;2!CL:0000047;1.29e-13;2!CL:0000346;1.60e-09;3!CL:1000428;1.60e-09;3!CL:0000057;3.60e-08;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,3.67e-66,6;CL:0002620,9.62e-18,23;CL:0002583,9.40e-14,2;CL:0000346,1.41e-09,3;CL:1000428,1.41e-09,3;CL:0000057,2.00e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.59e-07!5;DOID:450!8.59e-07!5;DOID:66!8.59e-07!5;DOID:423!8.59e-07!5;DOID:0080000!8.59e-07!5;DOID:11722!8.59e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!8.81e-13!45;UBERON:0002416!8.81e-13!45;UBERON:0002067!9.51e-11!9;UBERON:0004016!9.51e-11!9;UBERON:0010083!9.51e-11!9;UBERON:0002097!1.42e-10!40;UBERON:0004211!1.61e-07!16;UBERON:0001285!1.61e-07!16;UBERON:0007684!1.61e-07!16;UBERON:0003220!1.61e-07!16;UBERON:0004208!1.61e-07!16;UBERON:0002113!3.02e-07!27;UBERON:0003918!3.02e-07!27;UBERON:0005095!3.02e-07!27;UBERON:0007687!3.02e-07!27;UBERON:0009773!3.22e-07!12;UBERON:0001231!3.22e-07!12;UBERON:0004810!3.22e-07!12;UBERON:0003102!4.78e-07!95;UBERON:0006555!4.89e-07!17;UBERON:0005103!4.89e-07!17;UBERON:0000083!4.89e-07!17;UBERON:0009201!4.89e-07!17;UBERON:0004819!4.89e-07!17;UBERON:0006553!4.89e-07!17;UBERON:0003074!4.89e-07!17;UBERON:0003060!4.89e-07!17;UBERON:0001225!7.43e-07!13;UBERON:0008987!7.43e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;1.41e-68;9!UBERON:0003102;3.11e-15;50!UBERON:0004923;1.61e-12;55!UBERON:0002097;4.12e-12;41!UBERON:0002199;1.12e-11;46!UBERON:0002416;1.12e-11;46!UBERON:0000412;1.60e-09;3!UBERON:0001992;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002067,1.31e-68,9;UBERON:0004016,1.31e-68,9;UBERON:0010083,1.31e-68,9;UBERON:0002199,1.57e-19,46;UBERON:0002416,1.57e-19,46;UBERON:0002097,2.10e-15,41;UBERON:0004923,1.15e-09,66;UBERON:0000412,1.41e-09,3;UBERON:0001992,1.41e-09,3;UBERON:0003102,3.88e-09,99;UBERON:0002329,5.35e-09,71;UBERON:0003059,5.35e-09,71;UBERON:0007282,5.35e-09,71;UBERON:0004290,5.35e-09,71;UBERON:0009618,5.35e-09,71;UBERON:0003077,7.10e-09,72;UBERON:0007285,7.10e-09,72;UBERON:0007524,9.34e-09,73;UBERON:0007503,3.31e-08,78;UBERON:0000486,1.01e-07,83;UBERON:0010314,8.73e-07,132 | |||
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|short_description=p@chr1:45087872..45087892,+ | |||
}} |
Revision as of 05:53, 12 September 2013
Short description: | p@chr1:45087872..45087892, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:45087872..45087892, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 3.67e-66 | 6 |
skin fibroblast | 9.62e-18 | 23 |
subcutaneous preadipocyte | 9.40e-14 | 2 |
hair follicle dermal papilla cell | 1.41e-09 | 3 |
stem cell of epidermis | 1.41e-09 | 3 |
fibroblast | 2.00e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
dermis | 1.31e-68 | 9 |
dermatome | 1.31e-68 | 9 |
future dermis | 1.31e-68 | 9 |
integument | 1.57e-19 | 46 |
integumental system | 1.57e-19 | 46 |
skin of body | 2.10e-15 | 41 |
organ component layer | 1.15e-09 | 66 |
dermal papilla | 1.41e-09 | 3 |
papillary layer of dermis | 1.41e-09 | 3 |
surface structure | 3.88e-09 | 99 |
somite | 5.35e-09 | 71 |
presomitic mesoderm | 5.35e-09 | 71 |
presumptive segmental plate | 5.35e-09 | 71 |
dermomyotome | 5.35e-09 | 71 |
trunk paraxial mesoderm | 5.35e-09 | 71 |
paraxial mesoderm | 7.10e-09 | 72 |
presumptive paraxial mesoderm | 7.10e-09 | 72 |
dense mesenchyme tissue | 9.34e-09 | 73 |
epithelial vesicle | 3.31e-08 | 78 |
multilaminar epithelium | 1.01e-07 | 83 |
structure with developmental contribution from neural crest | 8.73e-07 | 132 |
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