FFCP PHASE1:Hg19::chr1:6511365..6511371,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83715|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13281|TSSclassifier=N|UniProt=|association_with_transcript=-346bp_to_ENST00000434576_5end|coexpression_cluster_id=C211|description=CAGE_peak_12_at_ESPN_5end|id=chr1:6511365..6511371,+|ontology_enrichment_celltype=CL:0000181!7.69e-23!12;CL:0000417!7.69e-23!12;CL:0000668!7.69e-23!12;CL:0000414!7.69e-23!12;CL:0000412!7.69e-23!12;CL:0000182!7.69e-23!12;CL:0002535!6.07e-07!2|ontology_enrichment_celltype_v019=CL:0002535;2.21e-15;2!CL:0000182;2.24e-10;12|ontology_enrichment_celltype_v019_2=CL:0002535,2.37e-15,2;CL:0000182,2.34e-10,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;6.21e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5|ontology_enrichment_uberon=UBERON:0002107!1.30e-20!19;UBERON:0006925!1.30e-20!19;UBERON:0008836!1.30e-20!19;UBERON:0008835!9.20e-18!22;UBERON:0003894!9.20e-18!22;UBERON:0009854!5.61e-17!23;UBERON:0007499!1.36e-15!25;UBERON:0009497!1.36e-15!25;UBERON:0000015!1.36e-15!25;UBERON:0002423!1.36e-15!25;UBERON:0006235!1.36e-15!25;UBERON:0004161!1.36e-15!25;UBERON:0005057!5.56e-15!26;UBERON:0009856!5.56e-15!26;UBERON:0002365!1.65e-12!31;UBERON:0002330!1.65e-12!31;UBERON:0003929!3.50e-12!54;UBERON:0005172!5.78e-12!55;UBERON:0005173!5.78e-12!55;UBERON:0002530!4.48e-11!59;UBERON:0002368!4.87e-11!35;UBERON:0002417!1.06e-10!61;UBERON:0000916!1.06e-10!61;UBERON:0004921!8.56e-09!129;UBERON:0004185!8.56e-09!129;UBERON:0000949!1.69e-08!45;UBERON:0005911!1.03e-07!82;UBERON:0001007!4.59e-07!155;UBERON:0001555!4.59e-07!155;UBERON:0007026!4.59e-07!155;UBERON:0006955!6.07e-07!2;UBERON:0004801!6.07e-07!2|ontology_enrichment_uberon_v019=UBERON:0006955;2.21e-15;2!UBERON:0004801;2.21e-15;2!UBERON:0002107;4.05e-14;19!UBERON:0006925;4.05e-14;19!UBERON:0002423;6.58e-11;25!UBERON:0002365;3.32e-09;31!UBERON:0002330;3.32e-09;31!UBERON:0000160;2.56e-07;17!UBERON:0001007;3.00e-07;81!UBERON:0002368;4.01e-07;33!UBERON:0002108;4.93e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.37e-15,2;UBERON:0004801,2.37e-15,2;UBERON:0002107,4.33e-14,19;UBERON:0006925,4.33e-14,19;UBERON:0008836,4.33e-14,19;UBERON:0008835,2.85e-12,22;UBERON:0003894,2.85e-12,22;UBERON:0009854,9.05e-12,23;UBERON:0007499,6.93e-11,25;UBERON:0009497,6.93e-11,25;UBERON:0000015,6.93e-11,25;UBERON:0002423,6.93e-11,25;UBERON:0006235,6.93e-11,25;UBERON:0004161,6.93e-11,25;UBERON:0009856,1.71e-10,26;UBERON:0002365,6.52e-09,31;UBERON:0002330,6.52e-09,31;UBERON:0002368,5.73e-08,35;UBERON:0000160,2.52e-07,17;UBERON:0002108,4.79e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,4.47610117026079,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@ESPN}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=83715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13281 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-346bp_to_ENST00000434576_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_12_at_ESPN_5end | |||
|id=chr1:6511365..6511371,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.69e-23!12;CL:0000417!7.69e-23!12;CL:0000668!7.69e-23!12;CL:0000414!7.69e-23!12;CL:0000412!7.69e-23!12;CL:0000182!7.69e-23!12;CL:0002535!6.07e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.21e-15;2!CL:0000182;2.24e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.37e-15,2;CL:0000182,2.34e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.30e-20!19;UBERON:0006925!1.30e-20!19;UBERON:0008836!1.30e-20!19;UBERON:0008835!9.20e-18!22;UBERON:0003894!9.20e-18!22;UBERON:0009854!5.61e-17!23;UBERON:0007499!1.36e-15!25;UBERON:0009497!1.36e-15!25;UBERON:0000015!1.36e-15!25;UBERON:0002423!1.36e-15!25;UBERON:0006235!1.36e-15!25;UBERON:0004161!1.36e-15!25;UBERON:0005057!5.56e-15!26;UBERON:0009856!5.56e-15!26;UBERON:0002365!1.65e-12!31;UBERON:0002330!1.65e-12!31;UBERON:0003929!3.50e-12!54;UBERON:0005172!5.78e-12!55;UBERON:0005173!5.78e-12!55;UBERON:0002530!4.48e-11!59;UBERON:0002368!4.87e-11!35;UBERON:0002417!1.06e-10!61;UBERON:0000916!1.06e-10!61;UBERON:0004921!8.56e-09!129;UBERON:0004185!8.56e-09!129;UBERON:0000949!1.69e-08!45;UBERON:0005911!1.03e-07!82;UBERON:0001007!4.59e-07!155;UBERON:0001555!4.59e-07!155;UBERON:0007026!4.59e-07!155;UBERON:0006955!6.07e-07!2;UBERON:0004801!6.07e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.21e-15;2!UBERON:0004801;2.21e-15;2!UBERON:0002107;4.05e-14;19!UBERON:0006925;4.05e-14;19!UBERON:0002423;6.58e-11;25!UBERON:0002365;3.32e-09;31!UBERON:0002330;3.32e-09;31!UBERON:0000160;2.56e-07;17!UBERON:0001007;3.00e-07;81!UBERON:0002368;4.01e-07;33!UBERON:0002108;4.93e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.37e-15,2;UBERON:0004801,2.37e-15,2;UBERON:0002107,4.33e-14,19;UBERON:0006925,4.33e-14,19;UBERON:0008836,4.33e-14,19;UBERON:0008835,2.85e-12,22;UBERON:0003894,2.85e-12,22;UBERON:0009854,9.05e-12,23;UBERON:0007499,6.93e-11,25;UBERON:0009497,6.93e-11,25;UBERON:0000015,6.93e-11,25;UBERON:0002423,6.93e-11,25;UBERON:0006235,6.93e-11,25;UBERON:0004161,6.93e-11,25;UBERON:0009856,1.71e-10,26;UBERON:0002365,6.52e-09,31;UBERON:0002330,6.52e-09,31;UBERON:0002368,5.73e-08,35;UBERON:0000160,2.52e-07,17;UBERON:0002108,4.79e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.412079291905832,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10346254298631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,4.47610117026079,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@ESPN | |||
}} |
Revision as of 06:25, 12 September 2013
Short description: | p12@ESPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_ESPN_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -346bp_to_ENST00000434576_5end |
EntrezGene: | ESPN |
HGNC: | 13281 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.37e-15 | 2 |
hepatocyte | 2.34e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.37e-15 | 2 |
cervix epithelium | 2.37e-15 | 2 |
liver | 4.33e-14 | 19 |
digestive gland | 4.33e-14 | 19 |
liver bud | 4.33e-14 | 19 |
hepatic diverticulum | 2.85e-12 | 22 |
liver primordium | 2.85e-12 | 22 |
digestive tract diverticulum | 9.05e-12 | 23 |
epithelial sac | 6.93e-11 | 25 |
epithelium of foregut-midgut junction | 6.93e-11 | 25 |
anatomical boundary | 6.93e-11 | 25 |
hepatobiliary system | 6.93e-11 | 25 |
foregut-midgut junction | 6.93e-11 | 25 |
septum transversum | 6.93e-11 | 25 |
sac | 1.71e-10 | 26 |
exocrine gland | 6.52e-09 | 31 |
exocrine system | 6.52e-09 | 31 |
endocrine gland | 5.73e-08 | 35 |
intestine | 2.52e-07 | 17 |
small intestine | 4.79e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.39e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.