FFCP PHASE1:Hg19::chr1:65366744..65366755,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:65366744..65366755,-|id=chr1:65366744..65366755,-|ontology_enrichment_celltype=CL:0000188!9.46e-36!9;CL:0002541!7.97e-17!3;CL:0000594!5.41e-16!3;CL:0002231!1.21e-07!3|ontology_enrichment_celltype_v019=CL:0002541;3.35e-66;3!CL:0000188;5.74e-23;9!CL:0000594;1.12e-17;3!CL:0000349;1.72e-11;19!CL:0000680;2.35e-08;7|ontology_enrichment_celltype_v019_2=CL:0002541,3.35e-66,3;CL:0000188,5.74e-23,9;CL:0000594,1.12e-17,3;CL:0000349,1.72e-11,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4468!1.12e-11!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003124!1.07e-18!7;UBERON:0005631!1.58e-17!14;UBERON:0000158!1.58e-17!14;UBERON:0000476!7.97e-17!3;UBERON:0000920!7.97e-17!3;UBERON:0000478!7.96e-10!24|ontology_enrichment_uberon_v019=UBERON:0003124;3.35e-66;3!UBERON:0000920;3.35e-66;3!UBERON:0005631;8.54e-21;10!UBERON:0000158;8.54e-21;10!UBERON:0001134;1.95e-13;16!UBERON:0002036;1.95e-13;16!UBERON:0000478;2.56e-09;24!UBERON:0002385;3.59e-07;31!UBERON:0001015;3.59e-07;31!UBERON:0000383;3.59e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.35e-66,3;UBERON:0003124,3.65e-29,7;UBERON:0005631,3.41e-15,14;UBERON:0000158,3.41e-15,14;UBERON:0000478,2.56e-09,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.767518373630648,0.964856007391714,0.107420244868274,0.290033387828457,1.70453254832202,4.80772992492382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50901275705111,0.366390373607449,3.73124343213044,0,0,0,0,0,0,0,0,0.421996129056054,0.979396848954886,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:65366744..65366755,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:65366744..65366755,- | |||
|id=chr1:65366744..65366755,- | |||
|ontology_enrichment_celltype=CL:0000188!9.46e-36!9;CL:0002541!7.97e-17!3;CL:0000594!5.41e-16!3;CL:0002231!1.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.35e-66;3!CL:0000188;5.74e-23;9!CL:0000594;1.12e-17;3!CL:0000349;1.72e-11;19!CL:0000680;2.35e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.35e-66,3;CL:0000188,5.74e-23,9;CL:0000594,1.12e-17,3;CL:0000349,1.72e-11,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!1.12e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.07e-18!7;UBERON:0005631!1.58e-17!14;UBERON:0000158!1.58e-17!14;UBERON:0000476!7.97e-17!3;UBERON:0000920!7.97e-17!3;UBERON:0000478!7.96e-10!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.35e-66;3!UBERON:0000920;3.35e-66;3!UBERON:0005631;8.54e-21;10!UBERON:0000158;8.54e-21;10!UBERON:0001134;1.95e-13;16!UBERON:0002036;1.95e-13;16!UBERON:0000478;2.56e-09;24!UBERON:0002385;3.59e-07;31!UBERON:0001015;3.59e-07;31!UBERON:0000383;3.59e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.35e-66,3;UBERON:0003124,3.65e-29,7;UBERON:0005631,3.41e-15,14;UBERON:0000158,3.41e-15,14;UBERON:0000478,2.56e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.154048617114644,0.767518373630648,0.964856007391714,0.107420244868274,0.290033387828457,1.70453254832202,4.80772992492382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50901275705111,0.366390373607449,3.73124343213044,0,0,0,0,0,0,0,0,0.421996129056054,0.979396848954886,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:65366744..65366755,- | |||
}} |
Revision as of 06:26, 12 September 2013
Short description: | p@chr1:65366744..65366755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:65366744..65366755, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.35e-66 | 3 |
cell of skeletal muscle | 5.74e-23 | 9 |
skeletal muscle satellite cell | 1.12e-17 | 3 |
extraembryonic cell | 1.72e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.35e-66 | 3 |
chorion | 3.65e-29 | 7 |
extraembryonic membrane | 3.41e-15 | 14 |
membranous layer | 3.41e-15 | 14 |
extraembryonic structure | 2.56e-09 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.