FFCP PHASE1:Hg19::chr1:75602749..75602758,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C53|description=CAGE_peak_at_chr1:75602749..75602758,+|id=chr1:75602749..75602758,+|ontology_enrichment_celltype=CL:0002556!7.10e-32!6;CL:0002552!2.25e-10!5;CL:0002617!3.93e-07!2|ontology_enrichment_celltype_v019=CL:0002556;9.07e-18;6!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15|ontology_enrichment_celltype_v019_2=CL:0002556,9.07e-18,6;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15|ontology_enrichment_development_v019=UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11|ontology_enrichment_uberon=UBERON:0001758!7.10e-32!6;UBERON:0003672!7.10e-32!6;UBERON:0003129!5.61e-27!11;UBERON:0000075!7.77e-23!13;UBERON:0005944!7.77e-23!13;UBERON:0004288!7.77e-23!13;UBERON:0003089!7.77e-23!13;UBERON:0000165!6.98e-15!28;UBERON:0000930!6.98e-15!28;UBERON:0005705!2.06e-13!1;UBERON:0008193!2.06e-13!1;UBERON:0002514!2.06e-13!1;UBERON:0003462!2.06e-13!1;UBERON:0008001!2.06e-13!1;UBERON:0007914!2.06e-13!1;UBERON:0003457!2.06e-13!1;UBERON:0009292!2.06e-13!1;UBERON:0007375!2.06e-13!1;UBERON:0003323!2.06e-13!1;UBERON:0002397!2.06e-13!1;UBERON:0001709!2.06e-13!1;UBERON:0004066!2.06e-13!1;UBERON:0002244!2.06e-13!1;UBERON:0005620!2.06e-13!1;UBERON:0004068!2.06e-13!1;UBERON:0004362!2.06e-13!1;UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0001444!1.66e-11!48;UBERON:0000078!7.91e-11!18;UBERON:0000033!5.96e-10!123;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0009663!1.63e-07!7;UBERON:0004089!2.43e-07!2;UBERON:0001875!4.17e-07!2;UBERON:0006514!4.17e-07!2;UBERON:0001873!4.98e-07!2;UBERON:0010122!4.98e-07!2;UBERON:0001828!8.35e-07!8|ontology_enrichment_uberon_v019=UBERON:0001758;9.07e-18;6!UBERON:0003672;9.07e-18;6!UBERON:0003129;1.91e-15;7!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0001758,9.07e-18,6;UBERON:0003672,9.07e-18,6;UBERON:0003129,1.91e-15,7;UBERON:0010323,2.37e-10,11;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0,1.22595118319608,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1431203189419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:75602749..75602758,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chr1:75602749..75602758,+ | |||
|id=chr1:75602749..75602758,+ | |||
|ontology_enrichment_celltype=CL:0002556!7.10e-32!6;CL:0002552!2.25e-10!5;CL:0002617!3.93e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002556;9.07e-18;6!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,9.07e-18,6;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001758!7.10e-32!6;UBERON:0003672!7.10e-32!6;UBERON:0003129!5.61e-27!11;UBERON:0000075!7.77e-23!13;UBERON:0005944!7.77e-23!13;UBERON:0004288!7.77e-23!13;UBERON:0003089!7.77e-23!13;UBERON:0000165!6.98e-15!28;UBERON:0000930!6.98e-15!28;UBERON:0005705!2.06e-13!1;UBERON:0008193!2.06e-13!1;UBERON:0002514!2.06e-13!1;UBERON:0003462!2.06e-13!1;UBERON:0008001!2.06e-13!1;UBERON:0007914!2.06e-13!1;UBERON:0003457!2.06e-13!1;UBERON:0009292!2.06e-13!1;UBERON:0007375!2.06e-13!1;UBERON:0003323!2.06e-13!1;UBERON:0002397!2.06e-13!1;UBERON:0001709!2.06e-13!1;UBERON:0004066!2.06e-13!1;UBERON:0002244!2.06e-13!1;UBERON:0005620!2.06e-13!1;UBERON:0004068!2.06e-13!1;UBERON:0004362!2.06e-13!1;UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0001444!1.66e-11!48;UBERON:0000078!7.91e-11!18;UBERON:0000033!5.96e-10!123;UBERON:0000153!1.99e-09!129;UBERON:0007811!1.99e-09!129;UBERON:0009663!1.63e-07!7;UBERON:0004089!2.43e-07!2;UBERON:0001875!4.17e-07!2;UBERON:0006514!4.17e-07!2;UBERON:0001873!4.98e-07!2;UBERON:0010122!4.98e-07!2;UBERON:0001828!8.35e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;9.07e-18;6!UBERON:0003672;9.07e-18;6!UBERON:0003129;1.91e-15;7!UBERON:0011137;2.37e-10;11!UBERON:0010323;2.37e-10;11!UBERON:0000075;1.54e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,9.07e-18,6;UBERON:0003672,9.07e-18,6;UBERON:0003129,1.91e-15,7;UBERON:0010323,2.37e-10,11;UBERON:0011137,2.00e-08,14;UBERON:0000075,1.54e-07,16 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0.206651562351531,0,0,0,0,0.505008341862199,0.125118519871964,0,0,1.22595118319608,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1431203189419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:75602749..75602758,+ | |||
}} |
Revision as of 06:43, 12 September 2013
Short description: | p@chr1:75602749..75602758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:75602749..75602758, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 9.07e-18 | 6 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
periodontium | 9.07e-18 | 6 |
dentition | 9.07e-18 | 6 |
skull | 1.91e-15 | 7 |
cranial skeletal system | 2.37e-10 | 11 |
axial skeletal system | 2.00e-08 | 14 |
subdivision of skeletal system | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.22e-09 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.