FFCP PHASE1:Hg19::chr20:62482031..62482052,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C80|description=CAGE_peak_at_chr20:62482031..62482052,-|id=chr20:62482031..62482052,-|ontology_enrichment_celltype=CL:0001014!8.82e-51!2;CL:0001016!8.82e-51!2;CL:0000453!4.92e-21!5;CL:0000840!1.03e-17!5;CL:0001029!1.03e-17!5;CL:0000990!3.74e-12!8;CL:0000451!4.03e-10!10;CL:0002031!9.64e-10!124;CL:0000623!1.54e-09!3;CL:0000825!1.54e-09!3;CL:0000738!1.25e-08!140;CL:0000838!4.90e-08!52;CL:0000542!6.84e-08!53;CL:0000051!6.84e-08!53;CL:0002032!2.59e-07!165;CL:0000837!2.59e-07!165;CL:0000037!5.19e-07!172;CL:0000566!5.19e-07!172|ontology_enrichment_celltype_v019=CL:0001014;3.29e-195;2!CL:0001016;3.29e-195;2!CL:0000453;3.49e-79;5!CL:0000840;2.83e-66;5!CL:0000990;9.75e-45;8!CL:0000451;6.80e-37;10|ontology_enrichment_celltype_v019_2=CL:0001014,3.29e-195,2;CL:0001016,3.29e-195,2;CL:0000453,3.49e-79,5;CL:0000840,2.83e-66,5;CL:0001029,2.83e-66,5;CL:0000990,9.75e-45,8;CL:0000451,6.80e-37,10;CL:0002009,1.20e-07,61;CL:0000557,4.47e-07,67|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:630!3.58e-26!1;DOID:0050177!3.58e-26!1;DOID:0050427!3.58e-26!1;DOID:0060060!4.61e-26!1;DOID:0060061!4.61e-26!1;DOID:8691!4.61e-26!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39937339723601,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr20:62482031..62482052,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_at_chr20:62482031..62482052,- | |||
|id=chr20:62482031..62482052,- | |||
|ontology_enrichment_celltype=CL:0001014!8.82e-51!2;CL:0001016!8.82e-51!2;CL:0000453!4.92e-21!5;CL:0000840!1.03e-17!5;CL:0001029!1.03e-17!5;CL:0000990!3.74e-12!8;CL:0000451!4.03e-10!10;CL:0002031!9.64e-10!124;CL:0000623!1.54e-09!3;CL:0000825!1.54e-09!3;CL:0000738!1.25e-08!140;CL:0000838!4.90e-08!52;CL:0000542!6.84e-08!53;CL:0000051!6.84e-08!53;CL:0002032!2.59e-07!165;CL:0000837!2.59e-07!165;CL:0000037!5.19e-07!172;CL:0000566!5.19e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.29e-195;2!CL:0001016;3.29e-195;2!CL:0000453;3.49e-79;5!CL:0000840;2.83e-66;5!CL:0000990;9.75e-45;8!CL:0000451;6.80e-37;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.29e-195,2;CL:0001016,3.29e-195,2;CL:0000453,3.49e-79,5;CL:0000840,2.83e-66,5;CL:0001029,2.83e-66,5;CL:0000990,9.75e-45,8;CL:0000451,6.80e-37,10;CL:0002009,1.20e-07,61;CL:0000557,4.47e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!3.58e-26!1;DOID:0050177!3.58e-26!1;DOID:0050427!3.58e-26!1;DOID:0060060!4.61e-26!1;DOID:0060061!4.61e-26!1;DOID:8691!4.61e-26!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39937339723601,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr20:62482031..62482052,- | |||
}} |
Revision as of 09:38, 12 September 2013
Short description: | p@chr20:62482031..62482052, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:62482031..62482052, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.29e-195 | 2 |
immature CD1a-positive Langerhans cell | 3.29e-195 | 2 |
Langerhans cell | 3.49e-79 | 5 |
immature conventional dendritic cell | 2.83e-66 | 5 |
common dendritic progenitor | 2.83e-66 | 5 |
conventional dendritic cell | 9.75e-45 | 8 |
dendritic cell | 6.80e-37 | 10 |
macrophage dendritic cell progenitor | 1.20e-07 | 61 |
granulocyte monocyte progenitor cell | 4.47e-07 | 67 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.