FFCP PHASE1:Hg19::chr2:12856642..12856654,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=28951|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30809|TSSclassifier=S|UniProt=Q92519|association_with_transcript=-343bp_to_NM_021643,NR_027303,uc002rbv.3,uc010yjp.1_5end|coexpression_cluster_id=C58|description=CAGE_peak_28_at_TRIB2_5end|id=chr2:12856642..12856654,+|ontology_enrichment_celltype=CL:0000148!2.81e-07!10;CL:0000541!2.81e-07!10;CL:0000333!5.68e-07!41|ontology_enrichment_celltype_v019=CL:0000148;9.56e-36;10!CL:0000147;1.05e-25;14!CL:0000511;4.10e-23;1!CL:0002625;4.10e-23;1!CL:0000216;4.10e-23;1!CL:0000710;3.73e-18;20!CL:0000075;1.44e-13;27!CL:0002077;6.33e-10;34!CL:0002567;9.31e-09;3!CL:0000149;9.10e-07;4|ontology_enrichment_celltype_v019_2=CL:0000148,1.05e-35,10;CL:0000541,1.05e-35,10;CL:0000147,1.12e-25,14;CL:0000511,2.62e-23,1;CL:0002625,2.62e-23,1;CL:0000216,2.62e-23,1;CL:0000710,3.90e-18,20;CL:0000075,1.49e-13,27;CL:0002077,7.56e-11,34;CL:0002567,8.96e-09,3;CL:0000333,1.18e-08,41;CL:0000149,9.63e-07,4|ontology_enrichment_development_v019=UBERON:0003056;1.30e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.22e-44;2|ontology_enrichment_disease_v019_2=DOID:1909,9.79e-45,2|ontology_enrichment_uberon=UBERON:0001049!5.69e-18!57;UBERON:0005068!5.69e-18!57;UBERON:0006241!5.69e-18!57;UBERON:0007135!5.69e-18!57;UBERON:0001893!1.70e-17!34;UBERON:0000073!9.18e-17!94;UBERON:0001016!9.18e-17!94;UBERON:0000955!1.36e-16!69;UBERON:0006238!1.36e-16!69;UBERON:0002791!1.56e-16!33;UBERON:0005743!4.13e-16!86;UBERON:0001017!5.30e-16!82;UBERON:0002616!1.05e-15!59;UBERON:0002020!1.09e-15!34;UBERON:0003528!1.09e-15!34;UBERON:0002780!2.73e-15!41;UBERON:0001890!2.73e-15!41;UBERON:0006240!2.73e-15!41;UBERON:0001869!3.50e-15!32;UBERON:0003080!8.70e-15!42;UBERON:0000956!1.66e-14!25;UBERON:0000203!1.66e-14!25;UBERON:0001950!1.93e-14!20;UBERON:0002619!7.54e-13!22;UBERON:0002346!3.13e-12!90;UBERON:0003075!3.53e-12!86;UBERON:0007284!3.53e-12!86;UBERON:0003056!1.35e-10!61;UBERON:0000033!1.97e-09!123;UBERON:0000153!2.75e-09!129;UBERON:0007811!2.75e-09!129;UBERON:0007023!3.03e-09!115;UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0004121!1.52e-07!169;UBERON:0000200!2.65e-07!6|ontology_enrichment_uberon_v019=UBERON:0001136;4.10e-23;1!UBERON:0001343;4.10e-23;1!UBERON:0004910;4.10e-23;1!UBERON:0004813;4.10e-23;1!UBERON:0004909;2.90e-12;2!UBERON:0001003;8.09e-07;15!UBERON:0007376;8.09e-07;15!UBERON:0005904;9.10e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.62e-23,1;UBERON:0001343,2.62e-23,1;UBERON:0004910,2.62e-23,1;UBERON:0005154,2.62e-23,1;UBERON:0005295,2.62e-23,1;UBERON:0004813,2.62e-23,1;UBERON:0005297,2.62e-23,1;UBERON:0005294,2.62e-23,1;UBERON:0010141,2.62e-23,1;UBERON:0005891,2.62e-23,1;UBERON:0004909,2.32e-12,2;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15;UBERON:0005904,8.14e-07,4|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.317489471460845,0.763976851116555,3.51652341630141,0,3.29047976650635,1.20137223137567,9.71809870943966,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.10460284631233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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=28951 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30809 | |||
|TSSclassifier=S | |||
|UniProt=Q92519 | |||
|association_with_transcript=-343bp_to_NM_021643,NR_027303,uc002rbv.3,uc010yjp.1_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_28_at_TRIB2_5end | |||
|id=chr2:12856642..12856654,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.81e-07!10;CL:0000541!2.81e-07!10;CL:0000333!5.68e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000148;9.56e-36;10!CL:0000147;1.05e-25;14!CL:0000511;4.10e-23;1!CL:0002625;4.10e-23;1!CL:0000216;4.10e-23;1!CL:0000710;3.73e-18;20!CL:0000075;1.44e-13;27!CL:0002077;6.33e-10;34!CL:0002567;9.31e-09;3!CL:0000149;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.05e-35,10;CL:0000541,1.05e-35,10;CL:0000147,1.12e-25,14;CL:0000511,2.62e-23,1;CL:0002625,2.62e-23,1;CL:0000216,2.62e-23,1;CL:0000710,3.90e-18,20;CL:0000075,1.49e-13,27;CL:0002077,7.56e-11,34;CL:0002567,8.96e-09,3;CL:0000333,1.18e-08,41;CL:0000149,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.30e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.22e-44;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.79e-45,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.69e-18!57;UBERON:0005068!5.69e-18!57;UBERON:0006241!5.69e-18!57;UBERON:0007135!5.69e-18!57;UBERON:0001893!1.70e-17!34;UBERON:0000073!9.18e-17!94;UBERON:0001016!9.18e-17!94;UBERON:0000955!1.36e-16!69;UBERON:0006238!1.36e-16!69;UBERON:0002791!1.56e-16!33;UBERON:0005743!4.13e-16!86;UBERON:0001017!5.30e-16!82;UBERON:0002616!1.05e-15!59;UBERON:0002020!1.09e-15!34;UBERON:0003528!1.09e-15!34;UBERON:0002780!2.73e-15!41;UBERON:0001890!2.73e-15!41;UBERON:0006240!2.73e-15!41;UBERON:0001869!3.50e-15!32;UBERON:0003080!8.70e-15!42;UBERON:0000956!1.66e-14!25;UBERON:0000203!1.66e-14!25;UBERON:0001950!1.93e-14!20;UBERON:0002619!7.54e-13!22;UBERON:0002346!3.13e-12!90;UBERON:0003075!3.53e-12!86;UBERON:0007284!3.53e-12!86;UBERON:0003056!1.35e-10!61;UBERON:0000033!1.97e-09!123;UBERON:0000153!2.75e-09!129;UBERON:0007811!2.75e-09!129;UBERON:0007023!3.03e-09!115;UBERON:0000924!1.03e-07!173;UBERON:0006601!1.03e-07!173;UBERON:0004121!1.52e-07!169;UBERON:0000200!2.65e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;4.10e-23;1!UBERON:0001343;4.10e-23;1!UBERON:0004910;4.10e-23;1!UBERON:0004813;4.10e-23;1!UBERON:0004909;2.90e-12;2!UBERON:0001003;8.09e-07;15!UBERON:0007376;8.09e-07;15!UBERON:0005904;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.62e-23,1;UBERON:0001343,2.62e-23,1;UBERON:0004910,2.62e-23,1;UBERON:0005154,2.62e-23,1;UBERON:0005295,2.62e-23,1;UBERON:0004813,2.62e-23,1;UBERON:0005297,2.62e-23,1;UBERON:0005294,2.62e-23,1;UBERON:0010141,2.62e-23,1;UBERON:0005891,2.62e-23,1;UBERON:0004909,2.32e-12,2;UBERON:0001003,7.86e-07,15;UBERON:0007376,7.86e-07,15;UBERON:0007383,7.86e-07,15;UBERON:0005904,8.14e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.317489471460845,0.763976851116555,3.51652341630141,0,3.29047976650635,1.20137223137567,9.71809870943966,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.122026264901963,0.3755727921195,0,0.110929051536852,0.18628920882415,0,0,1.36484205787483,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0,0.192687675289379,0,0.319267718114302,0,0.504143392443436,0.138314504928436,0.322951291263702,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.380494861163441,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0.171488009437418,0.135939465953663,0.197318320688547,0,0,0,0,0,0,0,0,1.35805433935647,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0.218559560503957,0,0.490296643507811,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.271965960763659,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0.366724332548599,0.406896178315738,0,0,0 | |||
|short_description=p28@TRIB2 | |||
}} |
Revision as of 13:25, 12 September 2013
Short description: | p28@TRIB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_TRIB2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -343bp_to_NM_021643, NR_027303, uc002rbv.3, uc010yjp.1_5end |
EntrezGene: | TRIB2 |
HGNC: | 30809 |
UniProt: | Q92519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.05e-35 | 10 |
melanoblast | 1.05e-35 | 10 |
pigment cell | 1.12e-25 | 14 |
androgen binding protein secreting cell | 2.62e-23 | 1 |
seminiferous tubule epithelial cell | 2.62e-23 | 1 |
Sertoli cell | 2.62e-23 | 1 |
neurecto-epithelial cell | 3.90e-18 | 20 |
columnar/cuboidal epithelial cell | 1.49e-13 | 27 |
ecto-epithelial cell | 7.56e-11 | 34 |
light melanocyte | 8.96e-09 | 3 |
migratory neural crest cell | 1.18e-08 | 41 |
visual pigment cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.62e-23 | 1 |
seminiferous tubule of testis | 2.62e-23 | 1 |
epithelium of male gonad | 2.62e-23 | 1 |
epithelial cord | 2.62e-23 | 1 |
sex cord | 2.62e-23 | 1 |
seminiferous tubule epithelium | 2.62e-23 | 1 |
testis sex cord | 2.62e-23 | 1 |
genital ridge | 2.62e-23 | 1 |
primitive sex cord of indifferent gonad | 2.62e-23 | 1 |
coelomic epithelium | 2.62e-23 | 1 |
epithelium of gonad | 2.32e-12 | 2 |
skin epidermis | 7.86e-07 | 15 |
outer epithelium | 7.86e-07 | 15 |
enveloping layer of ectoderm | 7.86e-07 | 15 |
duct of male reproductive system | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.79e-45 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.