FFCP PHASE1:Hg19::chr2:161951298..161951309,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3856|description=CAGE_peak_at_chr2:161951298..161951309,+|id=chr2:161951298..161951309,+|ontology_enrichment_celltype=CL:0000945!2.30e-36!24;CL:0000826!2.30e-36!24;CL:0000946!1.56e-19!1;CL:0000786!1.56e-19!1;CL:0000980!1.56e-19!1;CL:0000838!1.09e-16!52;CL:0000542!2.28e-16!53;CL:0000051!2.28e-16!53;CL:0000785!1.89e-10!2;CL:0000955!1.89e-10!2;CL:0000818!1.89e-10!2;CL:0000954!1.89e-10!2;CL:0000816!1.89e-10!2;CL:0000817!2.19e-07!3;CL:0002087!4.97e-07!119;CL:0002031!9.88e-07!124|ontology_enrichment_celltype_v019=CL:0000946;6.58e-50;1!CL:0000786;6.58e-50;1!CL:0000945;2.00e-19;24|ontology_enrichment_celltype_v019_2=CL:0000946,6.58e-50,1;CL:0000786,6.58e-50,1;CL:0000980,6.58e-50,1;CL:0000785,9.18e-26,2;CL:0000955,9.18e-26,2;CL:0000818,9.18e-26,2;CL:0000954,9.18e-26,2;CL:0000816,9.18e-26,2;CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000817,1.12e-17,3;CL:0000838,1.78e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53|ontology_enrichment_development_v019=CL:0000954;9.18e-26;2!UBERON:0004872;2.18e-08;7|ontology_enrichment_disease=DOID:630!1.88e-19!1;DOID:0050177!1.88e-19!1;DOID:0050427!1.88e-19!1;DOID:0060058!3.59e-17!10|ontology_enrichment_disease_v019=DOID:0060058;4.18e-45;10|ontology_enrichment_disease_v019_2=DOID:0060058,4.18e-45,10;DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51|ontology_enrichment_uberon=UBERON:0002372!2.71e-19!1;UBERON:0001961!2.71e-19!1;UBERON:0001744!2.71e-19!1;UBERON:0001735!2.71e-19!1;UBERON:0002106!2.05e-07!3;UBERON:0004854!2.05e-07!3;UBERON:0009034!2.05e-07!3;UBERON:0002095!2.05e-07!3;UBERON:0004782!2.05e-07!3;UBERON:0003281!2.05e-07!3;UBERON:0009664!2.05e-07!3;UBERON:0002296!2.05e-07!3;UBERON:0005602!2.05e-07!3;UBERON:0001179!2.05e-07!3;UBERON:0006293!2.05e-07!3|ontology_enrichment_uberon_v019=UBERON:0002106;9.46e-18;3!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,4.12290774213522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74991133685494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr2:161951298..161951309,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3856 | |||
|description=CAGE_peak_at_chr2:161951298..161951309,+ | |||
|id=chr2:161951298..161951309,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.30e-36!24;CL:0000826!2.30e-36!24;CL:0000946!1.56e-19!1;CL:0000786!1.56e-19!1;CL:0000980!1.56e-19!1;CL:0000838!1.09e-16!52;CL:0000542!2.28e-16!53;CL:0000051!2.28e-16!53;CL:0000785!1.89e-10!2;CL:0000955!1.89e-10!2;CL:0000818!1.89e-10!2;CL:0000954!1.89e-10!2;CL:0000816!1.89e-10!2;CL:0000817!2.19e-07!3;CL:0002087!4.97e-07!119;CL:0002031!9.88e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000946;6.58e-50;1!CL:0000786;6.58e-50;1!CL:0000945;2.00e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,6.58e-50,1;CL:0000786,6.58e-50,1;CL:0000980,6.58e-50,1;CL:0000785,9.18e-26,2;CL:0000955,9.18e-26,2;CL:0000818,9.18e-26,2;CL:0000954,9.18e-26,2;CL:0000816,9.18e-26,2;CL:0000945,2.00e-19,24;CL:0000826,2.00e-19,24;CL:0000817,1.12e-17,3;CL:0000838,1.78e-09,52;CL:0000542,2.59e-09,53;CL:0000051,2.59e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;9.18e-26;2!UBERON:0004872;2.18e-08;7 | |||
|ontology_enrichment_disease=DOID:630!1.88e-19!1;DOID:0050177!1.88e-19!1;DOID:0050427!1.88e-19!1;DOID:0060058!3.59e-17!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.18e-45;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.18e-45,10;DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002372!2.71e-19!1;UBERON:0001961!2.71e-19!1;UBERON:0001744!2.71e-19!1;UBERON:0001735!2.71e-19!1;UBERON:0002106!2.05e-07!3;UBERON:0004854!2.05e-07!3;UBERON:0009034!2.05e-07!3;UBERON:0002095!2.05e-07!3;UBERON:0004782!2.05e-07!3;UBERON:0003281!2.05e-07!3;UBERON:0009664!2.05e-07!3;UBERON:0002296!2.05e-07!3;UBERON:0005602!2.05e-07!3;UBERON:0001179!2.05e-07!3;UBERON:0006293!2.05e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;9.46e-18;3!UBERON:0004177;3.26e-11;5!UBERON:0005057;3.26e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,4.12290774213522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74991133685494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95897778844825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19811698959773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr2:161951298..161951309,+ | |||
}} |
Revision as of 14:20, 12 September 2013
Short description: | p@chr2:161951298..161951309, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:161951298..161951309, + |
Coexpression cluster: | C3856_Burkitt_lymphoma_splenic_diffuse_CD19_plasma_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 6.58e-50 | 1 |
plasma cell | 6.58e-50 | 1 |
plasmablast | 6.58e-50 | 1 |
mature B cell | 9.18e-26 | 2 |
pre-B-II cell | 9.18e-26 | 2 |
transitional stage B cell | 9.18e-26 | 2 |
small pre-B-II cell | 9.18e-26 | 2 |
immature B cell | 9.18e-26 | 2 |
lymphocyte of B lineage | 2.00e-19 | 24 |
pro-B cell | 2.00e-19 | 24 |
precursor B cell | 1.12e-17 | 3 |
lymphoid lineage restricted progenitor cell | 1.78e-09 | 52 |
lymphocyte | 2.59e-09 | 53 |
common lymphoid progenitor | 2.59e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.46e-18 | 3 |
gastrointestinal system mesentery | 9.46e-18 | 3 |
stomach region | 9.46e-18 | 3 |
mesentery | 9.46e-18 | 3 |
gastrointestinal system serosa | 9.46e-18 | 3 |
mesentery of stomach | 9.46e-18 | 3 |
gut mesentery | 9.46e-18 | 3 |
dorsal mesentery | 9.46e-18 | 3 |
dorsal mesogastrium | 9.46e-18 | 3 |
peritoneal cavity | 9.46e-18 | 3 |
spleen primordium | 9.46e-18 | 3 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.18e-45 | 10 |
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.