FFCP PHASE1:Mm9::chr10:116722255..116722285,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:116722255..116722285,+|id=chr10:116722255..116722285,+|ontology_enrichment_celltype=CL:0002194!1.52e-08!4;CL:0000766!1.52e-08!4;CL:0000576!1.52e-08!4;CL:0000235!1.52e-08!4;CL:0002009!1.52e-08!4;CL:0000040!1.52e-08!4;CL:0000559!1.52e-08!4|ontology_enrichment_celltype_v019_2=CL:0002476,2.50e-20,2;CL:0002194,1.13e-10,4;CL:0000766,1.13e-10,4;CL:0000234,1.13e-10,4;CL:0000576,1.13e-10,4;CL:0000235,1.13e-10,4;CL:0000864,1.13e-10,4;CL:0002009,1.13e-10,4;CL:0000040,1.13e-10,4;CL:0000559,1.13e-10,4;CL:0000355,2.58e-10,9|ontology_enrichment_disease=DOID:0060100!1.70e-11!3;DOID:4045!1.70e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-29,3;DOID:4045,1.75e-29,3;DOID:0050686,3.91e-15,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.78e-11,32;UBERON:0001134,2.58e-10,9;UBERON:0002036,2.58e-10,9;UBERON:0002385,2.58e-10,9;UBERON:0000486,2.58e-10,9;UBERON:0007503,2.58e-10,9;UBERON:0001015,2.58e-10,9;UBERON:0002329,2.58e-10,9;UBERON:0003082,2.58e-10,9;UBERON:0003059,2.58e-10,9;UBERON:0007282,2.58e-10,9;UBERON:0004290,2.58e-10,9;UBERON:0009618,2.58e-10,9;UBERON:0000383,2.40e-09,10;UBERON:0007524,1.50e-08,11;UBERON:0003077,1.50e-08,11;UBERON:0007285,1.50e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,1.5626706890476,3.14114246384279,3.52938892818609,6.14740936462601,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,4.52373851817817,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365855945745545,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr10:116722255..116722285,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:116722255..116722285,+ | |||
|id=chr10:116722255..116722285,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.52e-08!4;CL:0000766!1.52e-08!4;CL:0000576!1.52e-08!4;CL:0000235!1.52e-08!4;CL:0002009!1.52e-08!4;CL:0000040!1.52e-08!4;CL:0000559!1.52e-08!4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.50e-20,2;CL:0002194,1.13e-10,4;CL:0000766,1.13e-10,4;CL:0000234,1.13e-10,4;CL:0000576,1.13e-10,4;CL:0000235,1.13e-10,4;CL:0000864,1.13e-10,4;CL:0002009,1.13e-10,4;CL:0000040,1.13e-10,4;CL:0000559,1.13e-10,4;CL:0000355,2.58e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.70e-11!3;DOID:4045!1.70e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.75e-29,3;DOID:4045,1.75e-29,3;DOID:0050686,3.91e-15,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.78e-11,32;UBERON:0001134,2.58e-10,9;UBERON:0002036,2.58e-10,9;UBERON:0002385,2.58e-10,9;UBERON:0000486,2.58e-10,9;UBERON:0007503,2.58e-10,9;UBERON:0001015,2.58e-10,9;UBERON:0002329,2.58e-10,9;UBERON:0003082,2.58e-10,9;UBERON:0003059,2.58e-10,9;UBERON:0007282,2.58e-10,9;UBERON:0004290,2.58e-10,9;UBERON:0009618,2.58e-10,9;UBERON:0000383,2.40e-09,10;UBERON:0007524,1.50e-08,11;UBERON:0003077,1.50e-08,11;UBERON:0007285,1.50e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,1.5626706890476,3.14114246384279,3.52938892818609,6.14740936462601,11.1667381197165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,4.52373851817817,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365855945745545,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:116722255..116722285,+ | |||
}} |
Revision as of 15:50, 12 September 2013
Short description: | p@chr10:116722255..116722285, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:116722255..116722285, + |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.50e-20 | 2 |
monopoietic cell | 1.13e-10 | 4 |
myeloid leukocyte | 1.13e-10 | 4 |
phagocyte | 1.13e-10 | 4 |
monocyte | 1.13e-10 | 4 |
macrophage | 1.13e-10 | 4 |
tissue-resident macrophage | 1.13e-10 | 4 |
macrophage dendritic cell progenitor | 1.13e-10 | 4 |
monoblast | 1.13e-10 | 4 |
promonocyte | 1.13e-10 | 4 |
multi-potent skeletal muscle stem cell | 2.58e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.78e-11 | 32 |
skeletal muscle tissue | 2.58e-10 | 9 |
striated muscle tissue | 2.58e-10 | 9 |
muscle tissue | 2.58e-10 | 9 |
multilaminar epithelium | 2.58e-10 | 9 |
epithelial vesicle | 2.58e-10 | 9 |
musculature | 2.58e-10 | 9 |
somite | 2.58e-10 | 9 |
myotome | 2.58e-10 | 9 |
presomitic mesoderm | 2.58e-10 | 9 |
presumptive segmental plate | 2.58e-10 | 9 |
dermomyotome | 2.58e-10 | 9 |
trunk paraxial mesoderm | 2.58e-10 | 9 |
musculature of body | 2.40e-09 | 10 |
dense mesenchyme tissue | 1.50e-08 | 11 |
paraxial mesoderm | 1.50e-08 | 11 |
presumptive paraxial mesoderm | 1.50e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.75e-29 | 3 |
muscle cancer | 1.75e-29 | 3 |
organ system cancer | 3.91e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.