FFCP PHASE1:Mm9::chr10:80856835..80856855,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1255|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:80856835..80856855,+|id=chr10:80856835..80856855,+|ontology_enrichment_celltype=CL:0002563!4.10e-13!9;CL:0002251!4.10e-13!9;CL:0000239!7.72e-10!6;CL:0000677!7.72e-10!6;CL:0000212!7.72e-10!6;CL:0000584!7.72e-10!6;CL:0000075!2.90e-08!7;CL:0002076!5.67e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.69e-14,6;CL:0000677,1.69e-14,6;CL:0000584,1.69e-14,6;CL:0000075,2.17e-12,7;CL:0000682,8.08e-11,3;CL:0002563,1.42e-09,9;CL:0002251,1.42e-09,9;CL:0000066,1.04e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.10e-21!15;UBERON:0000160!2.31e-21!43;UBERON:0001242!9.92e-19!13;UBERON:0000060!9.92e-19!13;UBERON:0001262!9.92e-19!13;UBERON:0004786!9.92e-19!13;UBERON:0005409!5.59e-18!59;UBERON:0004923!2.41e-13!24;UBERON:0003350!4.10e-13!9;UBERON:0004808!4.10e-13!9;UBERON:0001277!4.10e-13!9;UBERON:0000485!2.61e-10!11;UBERON:0004119!1.55e-07!130;UBERON:0000925!1.55e-07!130;UBERON:0006595!1.55e-07!130;UBERON:0001007!3.16e-07!128;UBERON:0001555!3.16e-07!128;UBERON:0007026!3.16e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-31,31;UBERON:0000344,4.04e-26,15;UBERON:0001242,3.38e-20,13;UBERON:0001262,3.38e-20,13;UBERON:0004786,3.38e-20,13;UBERON:0005409,1.68e-19,47;UBERON:0004923,1.50e-15,24;UBERON:0002108,4.97e-14,4;UBERON:0000331,9.42e-11,3;UBERON:0002116,9.42e-11,3;UBERON:0001204,9.42e-11,3;UBERON:0001168,9.42e-11,3;UBERON:0003350,1.42e-09,9;UBERON:0004808,1.42e-09,9;UBERON:0001277,1.42e-09,9;UBERON:0001962,4.89e-08,2;UBERON:0001961,4.89e-08,2;UBERON:0001744,4.89e-08,2;UBERON:0000485,8.92e-08,11;UBERON:0001007,1.04e-07,116;UBERON:0001555,1.04e-07,116;UBERON:0007026,1.04e-07,116;UBERON:0004119,1.64e-07,118;UBERON:0000925,1.64e-07,118;UBERON:0006595,1.64e-07,118|phase1_expression=0,5.23463111459042,5.0049916332849,7.25914107136392,6.51164448930251,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.9559956734746,0,0,7.1996590257033,4.35877634027623,4.59385571292016,3.4460959692726,4.52489588640367,5.89072600314759,4.53654233567875,1.55211357458713,0,0,0,0.866554859253824,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,2.11560453330835,0,0,0,0.80673409849337,0.444756087689741,0.570676878337677,2.37264530772256,2.79988223030818,2.5133520880027,1.39269530428806,0.974820435595601,0.898819408654221,1.29682829924817,4.38110801159608,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.470996183524124,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0.203319467126849,0,0.418176592028937,0,0.269728692769641,0,0,0.259229946583586,0,22.5477175473676,0,0,0,0,0,0,0,0,3.14059357073808,3.45636007509439,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0.526139422875686,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p@chr10:80856835..80856855,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1255 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:80856835..80856855,+ | |||
|id=chr10:80856835..80856855,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.10e-13!9;CL:0002251!4.10e-13!9;CL:0000239!7.72e-10!6;CL:0000677!7.72e-10!6;CL:0000212!7.72e-10!6;CL:0000584!7.72e-10!6;CL:0000075!2.90e-08!7;CL:0002076!5.67e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.69e-14,6;CL:0000677,1.69e-14,6;CL:0000584,1.69e-14,6;CL:0000075,2.17e-12,7;CL:0000682,8.08e-11,3;CL:0002563,1.42e-09,9;CL:0002251,1.42e-09,9;CL:0000066,1.04e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.10e-21!15;UBERON:0000160!2.31e-21!43;UBERON:0001242!9.92e-19!13;UBERON:0000060!9.92e-19!13;UBERON:0001262!9.92e-19!13;UBERON:0004786!9.92e-19!13;UBERON:0005409!5.59e-18!59;UBERON:0004923!2.41e-13!24;UBERON:0003350!4.10e-13!9;UBERON:0004808!4.10e-13!9;UBERON:0001277!4.10e-13!9;UBERON:0000485!2.61e-10!11;UBERON:0004119!1.55e-07!130;UBERON:0000925!1.55e-07!130;UBERON:0006595!1.55e-07!130;UBERON:0001007!3.16e-07!128;UBERON:0001555!3.16e-07!128;UBERON:0007026!3.16e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-31,31;UBERON:0000344,4.04e-26,15;UBERON:0001242,3.38e-20,13;UBERON:0001262,3.38e-20,13;UBERON:0004786,3.38e-20,13;UBERON:0005409,1.68e-19,47;UBERON:0004923,1.50e-15,24;UBERON:0002108,4.97e-14,4;UBERON:0000331,9.42e-11,3;UBERON:0002116,9.42e-11,3;UBERON:0001204,9.42e-11,3;UBERON:0001168,9.42e-11,3;UBERON:0003350,1.42e-09,9;UBERON:0004808,1.42e-09,9;UBERON:0001277,1.42e-09,9;UBERON:0001962,4.89e-08,2;UBERON:0001961,4.89e-08,2;UBERON:0001744,4.89e-08,2;UBERON:0000485,8.92e-08,11;UBERON:0001007,1.04e-07,116;UBERON:0001555,1.04e-07,116;UBERON:0007026,1.04e-07,116;UBERON:0004119,1.64e-07,118;UBERON:0000925,1.64e-07,118;UBERON:0006595,1.64e-07,118 | |||
|phase1_expression=0,5.23463111459042,5.0049916332849,7.25914107136392,6.51164448930251,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.9559956734746,0,0,7.1996590257033,4.35877634027623,4.59385571292016,3.4460959692726,4.52489588640367,5.89072600314759,4.53654233567875,1.55211357458713,0,0,0,0.866554859253824,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,2.11560453330835,0,0,0,0.80673409849337,0.444756087689741,0.570676878337677,2.37264530772256,2.79988223030818,2.5133520880027,1.39269530428806,0.974820435595601,0.898819408654221,1.29682829924817,4.38110801159608,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0.470996183524124,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,5.53813589596716,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0.203319467126849,0,0.418176592028937,0,0.269728692769641,0,0,0.259229946583586,0,22.5477175473676,0,0,0,0,0,0,0,0,3.14059357073808,3.45636007509439,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0.526139422875686,0,0,0,0,0,0,0,0,0,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr10:80856835..80856855,+ | |||
}} |
Revision as of 17:43, 12 September 2013
Short description: | p@chr10:80856835..80856855, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80856835..80856855, + |
Coexpression cluster: | MCL_coexpression_mm9:1255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.69e-14 | 6 |
gut absorptive cell | 1.69e-14 | 6 |
enterocyte | 1.69e-14 | 6 |
columnar/cuboidal epithelial cell | 2.17e-12 | 7 |
M cell of gut | 8.08e-11 | 3 |
intestinal epithelial cell | 1.42e-09 | 9 |
epithelial cell of alimentary canal | 1.42e-09 | 9 |
epithelial cell | 1.04e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.19e-31 | 31 |
mucosa | 4.04e-26 | 15 |
intestinal mucosa | 3.38e-20 | 13 |
wall of intestine | 3.38e-20 | 13 |
gastrointestinal system mucosa | 3.38e-20 | 13 |
gastrointestinal system | 1.68e-19 | 47 |
organ component layer | 1.50e-15 | 24 |
small intestine | 4.97e-14 | 4 |
ileal mucosa | 9.42e-11 | 3 |
ileum | 9.42e-11 | 3 |
mucosa of small intestine | 9.42e-11 | 3 |
wall of small intestine | 9.42e-11 | 3 |
epithelium of mucosa | 1.42e-09 | 9 |
gastrointestinal system epithelium | 1.42e-09 | 9 |
intestinal epithelium | 1.42e-09 | 9 |
gut-associated lymphoid tissue | 4.89e-08 | 2 |
mucosa-associated lymphoid tissue | 4.89e-08 | 2 |
lymphoid tissue | 4.89e-08 | 2 |
simple columnar epithelium | 8.92e-08 | 11 |
digestive system | 1.04e-07 | 116 |
digestive tract | 1.04e-07 | 116 |
primitive gut | 1.04e-07 | 116 |
endoderm-derived structure | 1.64e-07 | 118 |
endoderm | 1.64e-07 | 118 |
presumptive endoderm | 1.64e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.